/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file2 	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	match_table_txt	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	html_index   	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
	alignments_1ton	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
	prefix       	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
 Matrices
	file1	10 matrices	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	12	15
		file1	2	10	10
		file1	3	11	12
		file1	4	10	41
		file1	5	10	37
		file1	6	13	11
		file1	7	13	11
		file1	8	11	9
		file1	9	12	4
		file1	10	11	10
	file2	10 matrices	$RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		12		15
		file2		2		10		10
		file2		3		11		12
		file2		4		10		41
		file2		5		10		37
		file2		6		13		11
		file2		7		13		11
		file2		8		11		9
		file2		9		12		4
		file2		10		11		10
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_7nt_mkv1_m3 oligos_7nt_mkv1_m3 oligos_7nt_mkv1_m3 oligos_7nt_mkv1_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m1 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv1_m4 oligos_7nt_mkv1_m4 oligos_7nt_mkv1_m4 oligos_7nt_mkv1_m4 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m2 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m5 oligos_6nt_mkv1_m5 oligos_6nt_mkv1_m5 oligos_6nt_mkv1_m5 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m4 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m2 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv1_m5 oligos_7nt_mkv1_m5 oligos_7nt_mkv1_m5 oligos_7nt_mkv1_m5 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m1 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m1 0.987 0.911 12 13 12 13 0.9231 1.0000 0.9231 D -1
oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m1 0.987 0.911 13 12 12 13 0.9231 0.9231 1.0000 D 1
oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m3 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m3 0.965 0.817 13 11 11 13 0.8462 0.8462 1.0000 D 0
oligos_6nt_mkv1_m3 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m3 oligos_7nt_mkv1_m2 0.965 0.817 11 13 11 13 0.8462 1.0000 0.8462 D 0
oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m1 0.903 0.753 10 12 10 12 0.8333 1.0000 0.8333 R 0
oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m4 0.903 0.753 12 10 10 12 0.8333 0.8333 1.0000 R 2
oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m4 0.806 0.733 11 10 10 11 0.9091 0.9091 1.0000 R 1
oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m3 0.806 0.733 10 11 10 11 0.9091 1.0000 0.9091 R 0
oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m2 0.926 0.712 10 13 10 13 0.7692 1.0000 0.7692 D -3
oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m2 0.926 0.712 13 10 10 13 0.7692 0.7692 1.0000 D 3
oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m1 0.901 0.693 10 13 10 13 0.7692 1.0000 0.7692 R 0
oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m4 0.901 0.693 13 10 10 13 0.7692 0.7692 1.0000 R 3
oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m1 0.710 0.650 11 12 11 12 0.9167 1.0000 0.9167 D -1
oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m3 0.710 0.650 12 11 11 12 0.9167 0.9167 1.0000 D 1
oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m2 0.807 0.621 10 13 10 13 0.7692 1.0000 0.7692 R -2
oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m4 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m4 0.807 0.621 13 10 10 13 0.7692 0.7692 1.0000 R 1
oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m2 0.789 0.607 13 10 10 13 0.7692 0.7692 1.0000 D 0
oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m1 oligos_6nt_mkv1_m2 oligos_7nt_mkv1_m1 0.789 0.607 10 13 10 13 0.7692 1.0000 0.7692 D 0
oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m3 0.898 0.553 10 11 8 13 0.6154 0.8000 0.7273 D -3
oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m3 oligos_6nt_mkv1_m2 0.898 0.553 11 10 8 13 0.6154 0.7273 0.8000 D 3
oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m2 0.806 0.537 10 10 8 12 0.6667 0.8000 0.8000 R -2
oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m4 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m4 0.806 0.537 10 10 8 12 0.6667 0.8000 0.8000 R -2
oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m2 0.757 0.524 12 10 9 13 0.6923 0.7500 0.9000 D -1
oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m1 oligos_6nt_mkv1_m2 oligos_6nt_mkv1_m1 0.757 0.524 10 12 9 13 0.6923 0.9000 0.7500 D 1
oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m1 0.786 0.491 13 13 10 16 0.6250 0.7692 0.7692 D 3
oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m2 oligos_7nt_mkv1_m1 oligos_7nt_mkv1_m2 0.786 0.491 13 13 10 16 0.6250 0.7692 0.7692 D -3
oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m1 0.751 0.422 13 12 9 16 0.5625 0.6923 0.7500 D 4
oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m2 oligos_6nt_mkv1_m1 oligos_7nt_mkv1_m2 0.751 0.422 12 13 9 16 0.5625 0.7500 0.6923 D -4 
 Host name	rsat
 Job started	2025-04-26.160512
 Job done	2025-04-26.160518
 Seconds	0.3
	user	0.3
	system	0.22
	cuser	5.33
;	csystem	0.97