; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	9	7	4	14	0	15	0	1	3	0	7	2
c	0	1	4	0	0	0	0	1	0	0	0	2
g	4	4	5	1	15	0	14	13	12	14	2	6
t	2	3	2	0	0	0	1	0	0	1	6	5
//
; Sites	15
>site_0
ATTAGATGGGTG
>site_1
AAAAGAGGAGTT
>site_2
ACAAGAGGAGAC
>site_3
AGGAGAGGGGAT
>site_4
AACAGAGGGGTA
>site_5
GAAAGAGGGGAC
>site_6
TTTGGAGGGGTT
>site_7
AAGAGAGGGGTT
>site_8
TGCAGAGGGGGG
>site_9
GAGAGAGAGGAG
>site_10
GAGAGAGGAGAG
>site_11
AGGAGAGGGGAA
>site_12
ATAAGAGGGGAG
>site_13
GACAGAGGGTTT
>site_14
AGCAGAGCGGGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	2	6	0	0	10	0	9	0	2	1
c	0	1	0	0	0	0	0	0	2	1
g	8	2	10	10	0	10	0	10	3	5
t	0	1	0	0	0	0	1	0	3	3
//
; Sites	10
>site_0
GAGGAGAGGG
>site_1
GGGGAGAGCG
>site_2
GAGGAGAGGG
>site_3
GTGGAGTGTG
>site_4
GGGGAGAGGC
>site_5
GAGGAGAGAA
>site_6
AAGGAGAGAG
>site_7
ACGGAGAGCT
>site_8
GAGGAGAGTT
>site_9
GAGGAGAGTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	2	5	3	0	12	1	0	12	0	9	3
c	1	0	0	0	0	0	0	0	0	0	1
g	4	4	9	12	0	11	12	0	9	2	5
t	5	3	0	0	0	0	0	0	3	1	3
//
; Sites	12
>site_0
AAAGAGGAGTT
>site_1
CAAGAGGAGAC
>site_2
TTGGAGGAGAG
>site_3
TGGGAAGAGAG
>site_4
AGAGAGGAGAG
>site_5
TAGGAGGATAA
>site_6
GGGGAGGAGAG
>site_7
TAGGAGGAGAA
>site_8
TAGGAGGAGAA
>site_9
GGGGAGGAGAG
>site_10
GTGGAGGATGT
>site_11
GTGGAGGATGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	8	9	1	1	0	0	6	0	5	3
c	17	10	36	26	37	39	4	40	14	21
g	2	2	2	0	1	0	10	0	1	4
t	14	20	2	14	3	2	21	1	21	13
//
; Sites	41
>site_0
AACTCCTCTT
>site_1
GTCTCCTCTT
>site_2
CTCTCCTCCA
>site_3
ATCCCCTCTC
>site_4
TACCCCTCTG
>site_5
GTCCCCTCTT
>site_6
TCTCCCTCAC
>site_7
AACCCTTCTC
>site_8
AACCCCTCCA
>site_9
AACCCCTCTC
>site_10
CCCCCCTCTG
>site_11
CTCCCCCCTC
>site_12
TTCCGCTCTC
>site_13
TCTCTCGCTT
>site_14
CTCCTCTCTC
>site_15
CTCTCCTCTC
>site_16
TTCCCCTCTC
>site_17
TTCTCCGCTT
>site_18
CACTCCACAA
>site_19
CCGCCCGCCT
>site_20
TCGCCCGCCC
>site_21
CTCCCCTCTT
>site_22
CTCTCCTCCC
>site_23
AAACCCTCTG
>site_24
TTCTCCTCCT
>site_25
TTCTCCTCCT
>site_26
TACACCACAC
>site_27
AACCCCGCCC
>site_28
CGCCCCCCGC
>site_29
CCCCCCGCTC
>site_30
CGCTCTGCTC
>site_31
ATCCTCGCCT
>site_32
CTCTCCGTCG
>site_33
CTCCCCGCCT
>site_34
CTCTCCTCCC
>site_35
CCCCCCACCC
>site_36
TTCCCCCCAC
>site_37
CCCCCCACCC
>site_38
TTCCCCCCAC
>site_39
TCCTCCACTT
>site_40
TCCTCCACTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	17	5	0	0	0	0	37	37	31	14
c	2	2	0	0	0	0	0	0	0	1
g	0	1	0	0	37	0	0	0	0	2
t	18	29	37	37	0	37	0	0	6	20
//
; Sites	37
>site_0
ATTTGTAATC
>site_1
CTTTGTAAAT
>site_2
ATTTGTAATT
>site_3
TCTTGTAAAT
>site_4
TCTTGTAAAT
>site_5
CGTTGTAAAG
>site_6
TTTTGTAATG
>site_7
TATTGTAATT
>site_8
TTTTGTAATA
>site_9
TATTGTAATA
>site_10
AATTGTAAAT
>site_11
ATTTGTAAAT
>site_12
TTTTGTAAAA
>site_13
ATTTGTAAAT
>site_14
TTTTGTAAAA
>site_15
ATTTGTAAAT
>site_16
TTTTGTAAAA
>site_17
ATTTGTAAAT
>site_18
TTTTGTAAAA
>site_19
ATTTGTAAAT
>site_20
TTTTGTAAAA
>site_21
ATTTGTAAAT
>site_22
TTTTGTAAAA
>site_23
AATTGTAAAT
>site_24
ATTTGTAAAT
>site_25
TTTTGTAAAA
>site_26
ATTTGTAAAT
>site_27
TTTTGTAAAA
>site_28
ATTTGTAAAT
>site_29
TTTTGTAAAA
>site_30
AATTGTAAAT
>site_31
ATTTGTAAAT
>site_32
TTTTGTAAAA
>site_33
ATTTGTAAAT
>site_34
TTTTGTAAAA
>site_35
ATTTGTAAAT
>site_36
TTTTGTAAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.160500_2025-04-26.160500_72i0jt/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-26.160505
; Job done	2025-04-26.160506
; Seconds	0.14
;	user	0.14
;	system	0.04
;	cuser	1.2
;	csystem	0.18
