; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.044641_2025-04-28.044641_ntYsd5/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.044641_2025-04-28.044641_ntYsd5/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.044641_2025-04-28.044641_ntYsd5/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.044641_2025-04-28.044641_ntYsd5/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	7	8	0	4	21	6	26	3	2	27	1	0	1	31	0	29	1	5	24	4	2	3	17	12
c	6	4	25	3	6	5	1	23	4	3	2	34	0	1	5	1	8	2	1	4	27	6	6	10
g	10	6	6	26	4	1	2	8	1	5	1	0	34	2	3	3	24	1	5	6	3	26	5	6
t	12	17	4	2	4	23	6	1	28	0	31	1	0	1	27	2	2	27	5	21	3	0	7	7
//
; Sites	35
>site_0
GATAAATACATCGATAGTATCGGC
>site_1
GACAACATCCTCGATAGTATAGTG
>site_2
CACTATACTATCGAGGATGTTGTC
>site_3
CTCGATAGAGCCGATAGTATCGAG
>site_4
CTCGATACTATCGGCTCTATCGAG
>site_5
TACGATACTATCGATAGCCGTCAG
>site_6
CTGACGGCTATCGATAGTATCGTA
>site_7
GATGCTACTATCGATAGTATCGAA
>site_8
TTCGATACTATCGATAGTAGCATC
>site_9
TTGTGAACGGTCGATAGTATCGAC
>site_10
GTCGATACTATCGACCGTTCACAA
>site_11
GTCGATAGTATCGACAGAGCGGCA
>site_12
TGCCGCTCTGTCGATACTATCGAC
>site_13
AGTCGCTCTATCGATACTATCGCA
>site_14
TGCGATAGTATCGATAGAGCGACT
>site_15
ATCGATACTATCGCGAGTGGCCAA
>site_16
TTGGCCACTCGCGATAGTATCGAT
>site_17
CACGATAGTATCGATACGTACGAG
>site_18
CTCGTACGTATCGATACTATCGTG
>site_19
TCTGTATACATCGATAGTATCGAC
>site_20
GTCGATACTATCGATGTATACAGA
>site_21
GTCGATACTATCGGCACTATCGGC
>site_22
GCCGATAGTGCCGATAGTATCGAC
>site_23
GCCGATACTATCGATACAAGCCCA
>site_24
TGGGCTTGTATCGATAGTATCGGC
>site_25
TCCGATAACATTGAGTGTATCGCA
>site_26
TGCGATACACTCAATGTTATCGGA
>site_27
GACACTACTATCGTTACTATCGAT
>site_28
ATCGATAGTAACGATAGTAGTGTC
>site_29
ATCGTTACTATCGATAGCTGGCAT
>site_30
ATGCCAGCTATCGATAGTAACGAT
>site_31
TACGTATCTATCGATAGTATCGCA
>site_32
TGCGATACTATCGATAGATACGTA
>site_33
ATCGATACTATCGACAGTGCCCAT
>site_34
ATGGGCACTGTCGATAGTATCGAT
a	10	15	14	11	6	18	4	1	1	41	0	42	1	1	39	1	3	1	29	5	13	8	13	10
c	11	16	7	16	18	6	5	41	0	1	0	0	25	0	2	1	40	0	5	8	5	7	8	5
g	13	3	9	6	6	10	9	0	40	0	1	1	16	0	0	0	0	42	5	8	20	16	8	12
t	9	9	13	10	13	9	25	1	2	1	42	0	1	42	2	41	0	0	4	22	5	12	14	16
//
; Sites	43
>site_0
CAGCGGTCGATACTATCGATGACG
>site_1
GCGTCATCGATAGTATCGACCGCT
>site_2
AATACATCGATAGTATCGGCTTGT
>site_3
GACAAGCCGATACTATCGATGTAT
>site_4
TAGCGACCGATACTATCGTGGCAG
>site_5
ACTTTTGCGATACTATCGGTGTGT
>site_6
GAAACGCCGATAGTATCGAATGAT
>site_7
TATCATTCGATACTATCGGCGTTT
>site_8
CTAACCACTATACTATCGAGGATG
>site_9
ACATCCTCGATAGTATAGTGGTTA
>site_10
ACATCCTCGATAGTATAGTGGTTA
>site_11
CTAACCACTATACTATCGAGGATG
>site_12
TCGCATACGATACTATCGATAGCC
>site_13
CGCACTGCGATAGTATCGCTGACA
>site_14
TTGTCAGCGATACTATCGCAGTGC
>site_15
ACATCGATGCTACTATCGATAGTA
>site_16
CTACTATCGATAGTATCGAACCGT
>site_17
CACGGTTCGATACTATCGATAGTA
>site_18
GAACGGTCGATAGTATCGACAGAG
>site_19
GCTCTGTCGATACTATCGACCGTT
>site_20
ACACCATCGATATTTTAGCTGCGA
>site_21
GCTCTATCGATACTATCGCAGTGG
>site_22
ACCACTGCGATAGTATCGATAGAG
>site_23
GTGCGTTCGATAGTATCGATGCCG
>site_24
GCGGCATCGATACTATCGAACGCA
>site_25
AATGTATCGATACTATCGCGAGTG
>site_26
CCACTCGCGATAGTATCGATACAT
>site_27
TACGTATCGATACTATCGTGCGTG
>site_28
TATACATCGATAGTATCGACTAAC
>site_29
GGTTAGTCGATACTATCGATGTAT
>site_30
TCTACATAAATACTTCCGAGGTTT
>site_31
ACGGCGCCGATACTATCGATACAA
>site_32
CTTGTATCGATAGTATCGGCGCCG
>site_33
GTTACTGCGATACACTCAATGTTA
>site_34
TATTTATCGATAGTCTCGGTGAGC
>site_35
AGCTCACCGAGACTATCGATAAAT
>site_36
CTACTATCGTTACTATCGATAGCT
>site_37
CAGCTATCGATAGTAACGATAGTA
>site_38
GAAAGGGCGATACTATCGATTGGC
>site_39
CCACTCGCGATGATATCGATGTAT
>site_40
TTCCATGCGATACTATCGATAGAT
>site_41
GATTAATCGATACTATCGACAGTG
>site_42
GCACTGTCGATAGTATCGATTAAT
a	11	8	5	0	2	21	4	27	1	2	27	1	0	1	28	1	23	0	6	19	3	2	5	16
c	9	7	4	26	1	6	3	1	23	1	2	2	32	0	1	4	2	8	3	2	4	21	8	6
g	5	9	8	4	28	2	1	1	8	0	3	1	0	31	2	1	4	21	2	4	7	4	17	4
t	7	8	15	2	1	3	24	3	0	29	0	28	0	0	1	26	3	3	21	7	18	5	2	6
//
; Sites	32
>site_0
AGCCGATACTATCGATGTATTTAT
>site_1
ACTCGATAGAGCCGATAGTATCGA
>site_2
ACTCGATACTATCGGCTCTATCGA
>site_3
ATACGATACTATCGATAGCCGTCA
>site_4
GCTGACGGCTATCGATAGTATCGT
>site_5
CGATGCTACTATCGATAGTATCGA
>site_6
GTTCGATACTATCGATAGTAGCAT
>site_7
TGTCGATACTATCGACCGTTCACA
>site_8
CAGCTAAAATATCGATGGTGTGTC
>site_9
CAGTCGCTCTATCGATACTATCGC
>site_10
CTGCGATAGTATCGATAGAGCGAC
>site_11
CATCGATACTATCGAACGCACATC
>site_12
TCGCGATAGTATCGATACATTTAA
>site_13
TATCGATACTATCGCGAGTGGCCA
>site_14
GTTGGCCACTCGCGATAGTATCGA
>site_15
GCACGATAGTATCGATACGTACGA
>site_16
ACTCGTACGTATCGATACTATCGT
>site_17
CCCCGCAACCATCGATTGTATTCA
>site_18
AGTCGATACTATCGATGTATACAG
>site_19
AGTCGATACTATCGGCACTATCGG
>site_20
TGCCGATAGTGCCGATAGTATCGA
>site_21
CGCCGATACTATCGATACAAGCCC
>site_22
CTGGGCTTGTATCGATAGTATCGG
>site_23
CTGCGATACACTCAATGTTATCGG
>site_24
TGACACTACTATCGTTACTATCGA
>site_25
TATCGATAGTAACGATAGTAGTGT
>site_26
TATCGTTACTATCGATAGCTGGCA
>site_27
GGGCGATACTATCGATTGGCGGCA
>site_28
ATACGTATCTATCGATAGTATCGC
>site_29
ATGCGATACTATCGATAGATACGT
>site_30
AATCGATACTATCGACAGTGCCCA
>site_31
AATGGGCACTGTCGATAGTATCGA
a	11	13	15	5	1	1	42	4	45	1	2	45	1	0	0	38	7	27	8	14	16	13
c	17	15	6	13	46	0	5	0	3	19	1	1	2	51	0	5	11	6	8	16	6	12
g	10	7	20	9	2	50	0	1	1	30	0	2	0	0	51	5	2	7	31	8	11	12
t	13	16	10	24	2	0	4	46	2	1	48	3	48	0	0	3	31	11	4	13	18	14
//
; Sites	51
>site_0
TCATCGATAGTATCGACCGCTG
>site_1
CGGTCGATACTATCGATGACGC
>site_2
AAGCCGATACTATCGATGTATT
>site_3
ACATCGATAGTATCGGCTTGTC
>site_4
GCCACGATAGTATCGGTCGCTA
>site_5
ACACCGATAGTATCGCAAAAGT
>site_6
TAGTCGATAGATTCGCCAGCAA
>site_7
ACGCCGATAGTATCGAATGATA
>site_8
CACTCGATAGAGCCGATAGTAT
>site_9
GAGCCGATAGTATCGAGTGCAA
>site_10
CTATCGATAGTATCGTATGCGA
>site_11
CATACGATACTATCGATAGCCG
>site_12
ACTGCGATAGTATCGCTGACAA
>site_13
ATTCCAATAGTATCGATTGCTT
>site_14
TCGATGCTACTATCGATAGTAT
>site_15
GGTTCGATACTATCGATAGTAG
>site_16
CTATCGATAGTATCGAACCGTG
>site_17
CTGTCGATACTATCGACCGTTC
>site_18
CGGTCGATAGTATCGACAGAGC
>site_19
ACTGCGATAGTATCGATAGAGC
>site_20
TGGGAGCACGTATCGATAGGTG
>site_21
GCATCGATACTATCGAACGCAC
>site_22
CGTTCGATAGTATCGATGCCGC
>site_23
CTCGCGATAGTATCGATACATT
>site_24
GTATCGATACTATCGCGAGTGG
>site_25
CGCACGATAGTATCGATACGTA
>site_26
TACTCGTACGTATCGATACTAT
>site_27
TCGGTGCTCGTTTCGATAGCCC
>site_28
TAGCCGCAACTATCGACAGATA
>site_29
TAGCCGATATTATCGTATGGTG
>site_30
TAGTCGATACTATCGATGTATA
>site_31
ACATCGATAGTATCGACTAACC
>site_32
CTTCGGTTGCTATCGATAGCCA
>site_33
GTGCCGATAGTATCGACTGCGT
>site_34
CAGTCGATACTATCGGCACTAT
>site_35
GTGCCGATAGTGCCGATAGTAT
>site_36
TCGCCGATAGTTTCGTTCATGG
>site_37
GTATCGATAGTATCGGCGCCGT
>site_38
GCGCCGATACTATCGATACAAG
>site_39
ACTGGGCTTGTATCGATAGTAT
>site_40
ATCGCGATAACATCGATATAAC
>site_41
TCACCGAGACTATCGATAAATA
>site_42
TTATCGATAGTCTCGGTGAGCT
>site_43
CTATCGATAGTAACGATAGTAG
>site_44
CTATCGTTACTATCGATAGCTG
>site_45
AGGGCGATACTATCGATTGGCG
>site_46
GATACGTATCTATCGATAGTAT
>site_47
CATGCGATACTATCGATAGATA
>site_48
CTATCGATAGTATCGCATGGAA
>site_49
CTGTCGATAGTATCGATTAATC
>site_50
TAATCGATACTATCGACAGTGC
a	19	19	52	1	51	44	48	0	53	17	17
c	14	8	2	1	2	2	1	2	1	10	14
g	6	16	1	4	0	4	6	0	1	9	8
t	16	12	0	49	2	5	0	53	0	19	16
//
; Sites	55
>site_0
GGATAAATGGT
>site_1
ATATAAATAAT
>site_2
GGACAAATACC
>site_3
GGATAGATAGA
>site_4
AGATAGATAAA
>site_5
AGATAAATACA
>site_6
CCATAAATAAC
>site_7
AACTAAATATC
>site_8
TAATAAATATG
>site_9
ACATATATACA
>site_10
TAATAAATAAA
>site_11
AGATATATAAT
>site_12
CTAAAAATAGG
>site_13
CTATAAATACG
>site_14
AGATAAACATC
>site_15
AGGTAAATAAA
>site_16
TGATAAGTAGA
>site_17
CCATCAATATA
>site_18
TCATAAATATA
>site_19
ATATAAATAGC
>site_20
CTAGAAATAAG
>site_21
TAATAAATAAA
>site_22
AAATAAATAAA
>site_23
AAATAAATACG
>site_24
GCATAAGTATA
>site_25
TAATAAGTAAC
>site_26
TTAGAAATAGT
>site_27
TAATATATAGT
>site_28
CGATAAGTATC
>site_29
ACATACATATT
>site_30
TTATTAATATA
>site_31
TAATATATATT
>site_32
GAATATATATT
>site_33
TTATTAATACC
>site_34
TAATAAATCCT
>site_35
TAATAAGTAAT
>site_36
TGATAACTACT
>site_37
ACATAAATAGC
>site_38
AGATAAACATA
>site_39
CAATAAATAAA
>site_40
AAATAAATATT
>site_41
AAATAGATAAG
>site_42
CAAGAAATAGA
>site_43
TTATCAATATC
>site_44
TTATAAATAAA
>site_45
CGATAAGTATC
>site_46
AAATAAATATT
>site_47
ACATAAATACT
>site_48
CGATACATATC
>site_49
GTATAAATATT
>site_50
CTAGAAATAAT
>site_51
CGATAAATATC
>site_52
CGATAGATACG
>site_53
AAATAAATAAC
>site_54
CACTAAATAAG
; Host name	rsat
; Job started	2025-04-28.044654
; Job done	2025-04-28.044654
; Seconds	0.14
;	user	0.14
;	system	0.01
;	cuser	0
;	csystem	0
