; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	3	3	0	2	10	4	14	2	4	16	1	0	1	16	0	11	0	1	13	3	0	2	10	4
c	5	3	13	2	5	0	2	12	3	1	1	17	0	0	1	0	4	1	1	0	14	3	2	6
g	6	2	3	14	0	1	1	4	0	1	0	0	17	1	1	3	12	2	0	5	2	13	3	5
t	4	10	2	0	3	13	1	0	11	0	16	1	0	1	16	4	2	14	4	10	2	0	3	3
//
; Sites	18
>site_0
CTCGATAGAGCCGATAGTATCGAG
>site_1
CTCGATACTATCGGCTCTATCGAG
>site_2
GATGCTACTATCGATAGTATCGAA
>site_3
TTCGATACTATCGATAGTAGCATC
>site_4
CACGATAGTATCGATACGTACGAG
>site_5
CTCGTACGTATCGATACTATCGTG
>site_6
GTGAATACAATCGATGGTTGCGGG
>site_7
CCCGCAACCATCGATTGTATTCAC
>site_8
TCTGTATACATCGATAGTATCGAC
>site_9
GTCGATACTATCGATGTATACAGA
>site_10
TCCGATAACATTGAGTGTATCGCA
>site_11
TGCGATACACTCAATGTTATCGGA
>site_12
GACACTACTATCGTTACTATCGAT
>site_13
ATCGATAGTAACGATAGTAGTGTC
>site_14
ATCGTTACTATCGATAGCTGGCAT
>site_15
ATGCCAGCTATCGATAGTAACGAT
>site_16
GGCGATACTATCGATTGGCGGCAC
>site_17
GTGCCGCCAATCGATAGTATCGCC
a	6	5	11	11	7	2	11	1	0	0	17	1	17	0	0	17	1	0	2	14	3	5	5	5
c	3	6	2	1	7	8	2	3	18	0	0	0	0	5	1	1	1	17	1	2	5	2	3	4
g	8	6	1	3	2	4	5	1	0	19	1	1	0	13	0	1	1	0	15	1	2	7	8	4
t	2	2	5	4	3	5	1	14	1	0	1	17	2	1	18	0	16	2	1	2	9	5	3	6
//
; Sites	19
>site_0
ACAGCGGTCGATACTATCGATGAC
>site_1
AGCGTCATCGATAGTATCGACCGC
>site_2
GGAAACGCCGATAGTATCGAATGA
>site_3
GATAGAGCCGATAGTATCGAGTGC
>site_4
GATACTATCGATAGTAGCATCGAT
>site_5
GCTACTATCGATAGTATCGAACCG
>site_6
GCACGGTTCGATACTATCGATAGT
>site_7
AGCACGCACGATAGTATCGATACG
>site_8
CAAAACACCGATAGTGCCATCGAT
>site_9
GCAACCATCGATTGTATTCACTCT
>site_10
GTATACATCGATAGTATCGACTAA
>site_11
TGGTTAGTCGATACTATCGATGTA
>site_12
AAAAACCTCGGAAGTATTTATGTA
>site_13
GATAACATTGAGTGTATCGCAGTA
>site_14
ATATTTATCGATAGTCTCGGTGAG
>site_15
ACTACTATCGTTACTATCGATAGC
>site_16
CCAGCTATCGATAGTAACGATAGT
>site_17
TGAAAGGGCGATACTATCGATTGG
>site_18
CGATACATCGATATCATCGCGAGT
a	8	14	24	40	3	37	35	40	2	38	13	11
c	7	10	3	1	2	1	0	0	1	1	9	8
g	6	4	4	0	4	1	2	1	0	1	5	10
t	20	13	10	0	32	2	4	0	38	1	14	12
//
; Sites	41
>site_0
TGGACAAATACC
>site_1
ACCATAAATAAC
>site_2
TTAATAAAAAGG
>site_3
CAACTAAATATC
>site_4
GTAATAAATATG
>site_5
CACATATATACA
>site_6
TAGATATATAAT
>site_7
TCTAAAAATAGG
>site_8
CCTATAAATACG
>site_9
TAGATAAACATC
>site_10
GCTAGAAATAAG
>site_11
AGAATAAATGCT
>site_12
TTAATAAATAAA
>site_13
AAAATAAATAAA
>site_14
AAAATAAATACG
>site_15
ATAATAAGTAAC
>site_16
TTTAGAAATAGT
>site_17
TTAATATATATT
>site_18
AGAATATATATT
>site_19
GGTATTAATAAA
>site_20
TTTATTAATACC
>site_21
TTAATAAATCCT
>site_22
CTAAAAAATACA
>site_23
TAAATAAATATA
>site_24
AATATAAATAAA
>site_25
GCAATAGATAGG
>site_26
TTAATAAATTAG
>site_27
TAAATAAAAATA
>site_28
CCAATAAATAAA
>site_29
TCAATGAATATT
>site_30
AAAATAAATATT
>site_31
GAAATAGATAAG
>site_32
CCAAGAAATAGA
>site_33
GTTATCAATATC
>site_34
TTTATAAATAAA
>site_35
CTAAAAAATATG
>site_36
TAAACAAATATT
>site_37
TAAATAAATATT
>site_38
TACATAAATACT
>site_39
TCTAGAAATAAT
>site_40
TCGATAAATATC
a	4	6	4	13	10	7	4	12	2	0	1	21	1	22	0	1	20	1	0	1	17	2	7	5
c	7	6	7	4	4	8	9	4	5	23	0	0	0	0	7	1	1	2	21	1	2	5	5	3
g	4	8	8	3	3	4	4	5	1	0	22	1	1	0	15	0	2	0	0	20	2	3	5	12
t	8	3	4	3	6	4	6	2	15	0	0	1	21	1	1	21	0	20	2	1	2	13	6	3
//
; Sites	23
>site_0
CACAGCGGTCGATACTATCGATGA
>site_1
GAGCGTCATCGATAGTATCGACCG
>site_2
TGGCTGCCACGATAGTATCGGTCG
>site_3
CGGAAACGCCGATAGTATCGAATG
>site_4
TCGAACACTCGATAGAGCCGATAG
>site_5
CGATAGAGCCGATAGTATCGAGTG
>site_6
TTTCTATTCCAATAGTATCGATTG
>site_7
TGCTACTATCGATAGTATCGAACC
>site_8
TGCACGGTTCGATACTATCGATAG
>site_9
TAGCACGCACGATAGTATCGATAC
>site_10
CGTACGTATCGATACTATCGTGCG
>site_11
ACAAAACACCGATAGTGCCATCGA
>site_12
CGCAACCATCGATTGTATTCACTC
>site_13
TGTATACATCGATAGTATCGACTA
>site_14
ATGGTTAGTCGATACTATCGATGT
>site_15
TAAAAACCTCGGAAGTATTTATGT
>site_16
GATATTTATCGATAGTCTCGGTGA
>site_17
ACAGCTCACCGAGACTATCGATAA
>site_18
CACTACTATCGTTACTATCGATAG
>site_19
GCCAGCTATCGATAGTAACGATAG
>site_20
ATGAAAGGGCGATACTATCGATTG
>site_21
GCCGCCAATCGATAGTATCGCCCT
>site_22
CCGATACATCGATATCATCGCGAG
a	6	4	3	0	1	10	4	14	2	2	15	1	0	1	15	0	11	1	2	12	4	0	2	10
c	4	5	4	14	1	4	0	1	11	3	1	1	16	0	0	1	0	4	1	1	0	12	4	1
g	3	4	2	1	15	0	1	1	4	0	1	0	0	16	1	1	2	10	2	0	4	2	11	3
t	4	4	8	2	0	3	12	1	0	12	0	15	1	0	1	15	4	2	12	4	9	3	0	3
//
; Sites	17
>site_0
ACTCGATAGAGCCGATAGTATCGA
>site_1
ACTCGATACTATCGGCTCTATCGA
>site_2
CGATGCTACTATCGATAGTATCGA
>site_3
GTTCGATACTATCGATAGTAGCAT
>site_4
GCACGATAGTATCGATACGTACGA
>site_5
ACTCGTACGTATCGATACTATCGT
>site_6
CCCCGCAACCATCGATTGTATTCA
>site_7
ATCTGTATACATCGATAGTATCGA
>site_8
AGTCGATACTATCGATGTATACAG
>site_9
TTCCGATAACATTGAGTGTATCGC
>site_10
CTGCGATACACTCAATGTTATCGG
>site_11
CACCGAGACTATCGATAAATATCG
>site_12
TGACACTACTATCGTTACTATCGA
>site_13
TATCGATAGTAACGATAGTAGTGT
>site_14
TATCGTTACTATCGATAGCTGGCA
>site_15
AATGCCAGCTATCGATAGTAACGA
>site_16
GGGCGATACTATCGATTGGCGGCA
; Host name	rsat
; Job started	2025-04-28.203749
; Job done	2025-04-28.203749
; Seconds	0.11
;	user	0.11
;	system	0
;	cuser	0
;	csystem	0
