; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	25	45	5	2	0	85	4	74	3	11	31
c	24	11	5	84	1	2	2	0	12	27	15
g	14	16	4	1	86	0	3	8	69	12	14
t	25	16	74	1	1	1	79	6	4	38	28
//
; Sites	88
>site_0
GGTCGATACTA
>site_1
CATCGATAGTA
>site_2
GTTCTATAGTT
>site_3
CATCGAGAGGA
>site_4
TCTCGATGGCG
>site_5
TTTCGACAGCC
>site_6
GGTCGCTAGGT
>site_7
CCACGATAGTA
>site_8
CGTCGATAGAT
>site_9
CGCCGATAGTA
>site_10
ATTCGATACTA
>site_11
CTTCGTTAGCT
>site_12
GATCGAAAGAG
>site_13
ATTCGATAATC
>site_14
ACTCGATAGAG
>site_15
AGCCGATAGTA
>site_16
ACTCGATACTA
>site_17
AATCGATACTT
>site_18
GATCGAGAGCA
>site_19
CAACGATAGCT
>site_20
GTTCGATAGCT
>site_21
TATCGATTGCT
>site_22
AATCGATACTA
>site_23
TATCGATTGAA
>site_24
AATCGATAGTT
>site_25
ATTAGATAGCG
>site_26
TATCGATAGTA
>site_27
TATCGATAGTA
>site_28
GTTCGATACTA
>site_29
TCTCGATATCA
>site_30
GCTCGATAGCA
>site_31
ATTTGATAGTG
>site_32
TGTCCATAGGT
>site_33
CTTCGAAAGTC
>site_34
GGTCGATGGAC
>site_35
GTGCGATAGTT
>site_36
TATCGATGGCC
>site_37
CATCGATAGCA
>site_38
TATCGATTGCT
>site_39
AATCGATACAT
>site_40
AATAGATAGGG
>site_41
AGTCGAAAGTC
>site_42
TGTGGATAGCC
>site_43
AGGCGATAGCC
>site_44
TATCGATTGCT
>site_45
AATCGATAGGC
>site_46
ATTCGATACCG
>site_47
CGTCGAAAGAC
>site_48
GCACGATAGTA
>site_49
TATCGATACTA
>site_50
TATCGATACGT
>site_51
TTTCGATAGCC
>site_52
CCCCGATAGCT
>site_53
CCTCGATGGGG
>site_54
CATCGATAGTT
>site_55
TATCGATGGCA
>site_56
CACCGATAGTG
>site_57
TATCGACAGAT
>site_58
TGTCGATAGTT
>site_59
AGTCGATGGGC
>site_60
CGTCGATAGTG
>site_61
AATCGATAGTG
>site_62
CTTCGATATTG
>site_63
CATCGATTGTA
>site_64
AATCGATGGTT
>site_65
CATCGATAGTA
>site_66
AGTCGATACTA
>site_67
AATCGAGAGAA
>site_68
ATGCGATAGGC
>site_69
GCTCGATAGTT
>site_70
TATCGATGGTT
>site_71
CATCGATAGGT
>site_72
AATCGATACCT
>site_73
TATCGATTGGG
>site_74
GTGCGATAGGA
>site_75
AATCGATAGCT
>site_76
CACCGATAGCT
>site_77
CGACGATAGTA
>site_78
TATCGATAAAT
>site_79
TATCGATAGTC
>site_80
TAACGATAGTA
>site_81
TATCGATAGTA
>site_82
TATCGATAGCT
>site_83
CATCGCTAGCC
>site_84
AATCGATAGTA
>site_85
CATCGATATCA
>site_86
GCTCGATAAAG
>site_87
CATCGATATCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.203737_2025-04-28.203737_n2namY/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1_rc.png
;
; Host name	rsat
; Job started	2025-04-28.203804
; Job done	2025-04-28.203804
; Seconds	0.11
;	user	0.11
;	system	0.01
;	cuser	0.24
;	csystem	0.04
