RSAT - peak-motifs result

Analysis: TnaA_WD_ALL+ (28/04/2025 20:43)

peak-motifs  -v 1 -title TnaA_WD_ALL+ -i $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6

motif discovery
oligos_6nt_mkv2	oligos_6nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=28.59; e-value=2.6e-29) RC: cgatactatcgatagtatcg oligos_6nt_mkv2_m2 assembly: acatcgatagtatcga (sig=28.59; e-value=2.6e-29) RC: tcgatactatcgatgt oligos_6nt_mkv2_m3 assembly: gcgatagtatcgatactatc (sig=28.59; e-value=2.6e-29) RC: gatagtatcgatactatcgc oligos_6nt_mkv2_m4 assembly: ccgatagtatcgatactatc (sig=28.59; e-value=2.6e-29) RC: gatagtatcgatactatcgg oligos_6nt_mkv2_m5 assembly: aaaata (sig=1.28; e-value=0.052) RC: tatttt oligos_6nt_mkv2_m6 assembly: aaacat (sig=0.19; e-value=0.65) RC: atgttt oligos_6nt_mkv2_m7 assembly: aagaaa (sig=0.14; e-value=0.72) RC: tttctt oligos_6nt_mkv2_m8 assembly: aacaaa (sig=0.12; e-value=0.76) RC: tttgtt oligos_6nt_mkv2_m9 assembly: aattaa (sig=0.03; e-value=0.93) RC: ttaatt oligos_6nt_mkv2_m10 assembly: aggtgg (sig=0.02; e-value=0.95) RC: ccacct	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_6nt	Not a single significant pattern	[local_words_6nt]
positions_6nt	positions_6nt_m1 assembly: ctatcgatag (sig=8.56; e-value=2.8e-09) RC: ctatcgatag positions_6nt_m2 assembly: ctatcgatac (sig=8.56; e-value=2.8e-09) RC: gtatcgatag positions_6nt_m3 : (sig=; e-value=1) RC: positions_6nt_m4 : (sig=; e-value=1) RC: positions_6nt_m5 : (sig=; e-value=1) RC: positions_6nt_m6 : (sig=; e-value=1) RC: positions_6nt_m7 : (sig=; e-value=1) RC: positions_6nt_m8 : (sig=; e-value=1) RC: positions_6nt_m9 : (sig=; e-value=1) RC: positions_6nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv2	oligos_7nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=25.70; e-value=2e-26) RC: cgatactatcgatagtatcg oligos_7nt_mkv2_m2 assembly: aacatcgatactatcgatgt (sig=25.70; e-value=2e-26) RC: acatcgatagtatcgatgtt oligos_7nt_mkv2_m3 assembly: gcgatactatcgatagtatc (sig=25.70; e-value=2e-26) RC: gatactatcgatagtatcgc oligos_7nt_mkv2_m4 assembly: gccgatagtatcgatagc (sig=25.70; e-value=2e-26) RC: gctatcgatactatcggc oligos_7nt_mkv2_m5 assembly: ataaata (sig=1.76; e-value=0.017) RC: tatttat oligos_7nt_mkv2_m6 assembly: ccgccgcc (sig=1.40; e-value=0.04) RC: ggcggcgg oligos_7nt_mkv2_m7 assembly: atactatcgatagtatcgca (sig=25.70; e-value=2e-26) RC: tgcgatactatcgatagtat oligos_7nt_mkv2_m8 assembly: gctatcgatactatcgca (sig=25.70; e-value=2e-26) RC: tgcgatagtatcgatagc oligos_7nt_mkv2_m9 assembly: ccacctcta (sig=0.70; e-value=0.2) RC: tagaggtgg oligos_7nt_mkv2_m10 assembly: ttaataa (sig=0.42; e-value=0.38) RC: ttattaa	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_7nt	Not a single significant pattern	[local_words_7nt]
positions_7nt	positions_7nt_m1 assembly: actatcgatagt (sig=3.77; e-value=0.00017) RC: actatcgatagt positions_7nt_m2 assembly: actatcgatg (sig=3.77; e-value=0.00017) RC: catcgatagt positions_7nt_m3 : (sig=; e-value=1) RC: positions_7nt_m4 : (sig=; e-value=1) RC: positions_7nt_m5 : (sig=; e-value=1) RC: positions_7nt_m6 : (sig=; e-value=1) RC: positions_7nt_m7 : (sig=; e-value=1) RC: positions_7nt_m8 : (sig=; e-value=1) RC: positions_7nt_m9 : (sig=; e-value=1) RC: positions_7nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
dyads	dyads_m1 assembly: gatactatcgatagtatcgc (sig=37.50; e-value=3.2e-38) RC: gcgatactatcgatagtatc dyads_m2 assembly: aacatcgatagtatcgatgt (sig=37.50; e-value=3.2e-38) RC: acatcgatactatcgatgtt dyads_m3 assembly: ccgatagtatcgatactatc (sig=37.50; e-value=3.2e-38) RC: gatagtatcgatactatcgg dyads_m4 assembly: taaaatat (sig=4.47; e-value=3.4e-05) RC: atatttta dyads_m5 assembly: ggcagcaa (sig=1.89; e-value=0.013) RC: ttgctgcc dyads_m6 assembly: caaaaac (sig=1.67; e-value=0.021) RC: gtttttg dyads_m7 assembly: ccgctgcc (sig=1.45; e-value=0.035) RC: ggcagcgg dyads_m8 assembly: tataaatat (sig=2.09; e-value=0.0081) RC: atatttata dyads_m9 assembly: aacatcgatactatcgac (sig=37.50; e-value=3.2e-38) RC: gtcgatagtatcgatgtt dyads_m10 assembly: acgnnnnnnnnnnnnnnnnnntgc (sig=0.95; e-value=0.11) RC: gcannnnnnnnnnnnnnnnnncgt	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv2_m1	k-mer sig=28.59; evalue=2.6e-29 ktCGataCTATCGATAGtatCGam KTCGATACTATCGATAGTATCGAM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ktCGataCTATCGATAGtatCGam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 26 (40.00%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 2.77	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv2_m2	k-mer sig=28.59; evalue=2.6e-29 hrmyatCGATAsTATCGayr YRTCGATASTATCGATRKYD	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor hrmyatCGATAsTATCGayr Dref Dref D 10 0.5000 0.872 0.436 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 29 (44.62%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv2_m3	k-mer sig=28.59; evalue=2.6e-29 wkkCGATAsTATCGATaswatCgm KCGATWSTATCGATASTATCGMMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkkCGATAsTATCGATaswatCgm Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (43.08%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_112::chrX:1033062-1033340(.)) Mean nb of predicted sites per peak: 1.86	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv2_m4	k-mer sig=28.59; evalue=2.6e-29 wkyCGATAsTATCGATaswdtygw WCRAHWSTATCGATASTATCGRMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkyCGATAsTATCGATaswdtygw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 25 (38.46%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv2_m5	k-mer sig=1.28; evalue=0.052 rwAAAATAwh DWTATTTTWY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rwAAAATAwh hb hb D 8 0.7273 0.715 0.520 NA NA Antp Antp D 6 0.6000 0.813 0.488 NA NA ap ap D 6 0.6000 0.769 0.462 NA NA Total matches= 7 (4 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (35.38%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_69::chr3R:17718233-17718505(.)) Mean nb of predicted sites per peak: 1.52	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_6nt_mkv2_m6	k-mer sig=0.19; evalue=0.65 aaAAACATyr YRATGTTTTT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aaAAACATyr twi twi D 7 0.6364 0.750 0.477 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 18 (27.69%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_35::chr2R:21501874-21502185(.)) Mean nb of predicted sites per peak: 1.22	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_6nt_mkv2_m7	k-mer sig=0.14; evalue=0.72 waAAGAAAwr YWTTTCTTTW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor waAAGAAAwr sd sd R 10 0.8333 0.701 0.584 NA NA zen zen D 6 0.6000 0.746 0.448 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 11 (16.92%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 1.55	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_6nt_mkv2_m8	k-mer sig=0.12; evalue=0.76 ymAACAAAww WWTTTGTTKR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ymAACAAAww pan pan D 6 0.6000 0.834 0.501 NA NA zen zen D 6 0.6000 0.767 0.460 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 17 (26.15%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_123::chrX:23105922-23106133(.)) Mean nb of predicted sites per peak: 1.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   oligos_6nt_mkv2_m9	k-mer sig=0.03; evalue=0.93 taAATTAAww WWTTAATTTA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor taAATTAAww Dfd Dfd R 8 0.8000 0.896 0.716 NA NA en en R 8 0.8000 0.894 0.715 NA NA ftz ftz D 8 0.8000 0.857 0.686 NA NA Total matches= 8 (5 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 17 (26.15%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_29::chr2R:12869631-12869837(.)) Mean nb of predicted sites per peak: 1.59	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   oligos_6nt_mkv2_m10	k-mer sig=0.02; evalue=0.95 rgAGGTGGrw WYCCACCTCY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rgAGGTGGrw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (21.54%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_57::chr3R:938882-939143(.)) Mean nb of predicted sites per peak: 1.21	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   positions_6nt_m1	k-mer sig=8.56; evalue=2.8e-09 wrCtATCGATaGyw WRCTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrCtATCGATaGyw Dref Dref D 10 0.7143 0.885 0.632 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 33 (50.77%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.73	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   positions_6nt_m2	k-mer sig=8.56; evalue=2.8e-09 wrCTATCGATAstw WASTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrCTATCGATAstw Dref Dref R 10 0.7143 0.889 0.635 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 35 (53.85%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.40	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   oligos_7nt_mkv2_m1	k-mer sig=25.70; evalue=2e-26 ktCGatACTATCGATAGTatCGam KTCGATACTATCGATAGTATCGAM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ktCGatACTATCGATAGTatCGam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (35.38%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 2.61	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   oligos_7nt_mkv2_m2	k-mer sig=25.70; evalue=2e-26 smwcyrtCGATAsTATCGatrkwk MWMYATCGATASTATCGAYRGWKS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor smwcyrtCGATAsTATCGatrkwk Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 27 (41.54%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.22	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   oligos_7nt_mkv2_m3	k-mer sig=25.70; evalue=2e-26 mgkCGaTASTATCGATaStatCsa TSGATASTATCGATASTATCGMCK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mgkCGaTASTATCGATaStatCsa Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 24 (36.92%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.33	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   oligos_7nt_mkv2_m4	k-mer sig=25.70; evalue=2e-26 cyryCGATAsTATCGAtagmwb VWKCTATCGATASTATCGRYRG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cyryCGATAsTATCGAtagmwb Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 29 (44.62%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   oligos_7nt_mkv2_m5	k-mer sig=1.76; evalue=0.017 hrATAAATAwh DWTATTTATYD	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor hrATAAATAwh br-Z4 br-Z4 R 8 0.7273 0.811 0.590 NA NA zen zen D 6 0.5455 0.895 0.488 NA NA Antp Antp D 6 0.5455 0.875 0.477 NA NA Total matches= 9 (6 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 18 (27.69%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_84::chr4:43674-43954(.)) Mean nb of predicted sites per peak: 1.22	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   oligos_7nt_mkv2_m6	k-mer sig=1.40; evalue=0.04 cgCCGCCGCCsm KSGGCGGCGGCG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cgCCGCCGCCsm brk brk D 7 0.5833 0.718 0.419 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (21.54%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_43::chr3L:8203015-8203253(.)) Mean nb of predicted sites per peak: 1.93	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   oligos_7nt_mkv2_m7	k-mer sig=25.70; evalue=2e-26 sratactATCGATAGTATCGasks SMSTCGATACTATCGATAGTATYS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor sratactATCGATAGTATCGasks Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (43.08%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.36	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   oligos_7nt_mkv2_m8	k-mer sig=25.70; evalue=2e-26 rhkctaTCGATAsTATCGmyrs SYRKCGATASTATCGATAGMDY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rhkctaTCGATAsTATCGmyrs Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 32 (49.23%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.12	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 21   oligos_7nt_mkv2_m9	k-mer sig=0.70; evalue=0.2 tgCCACCTCTagc GCTAGAGGTGGCA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tgCCACCTCTagc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 17 (26.15%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_67::chr3R:15385232-15385432(.)) Mean nb of predicted sites per peak: 1.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 22   oligos_7nt_mkv2_m10	k-mer sig=0.42; evalue=0.38 trTTAATAArw WYTTATTAAYA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor trTTAATAArw Dfd Dfd D 8 0.7273 0.741 0.539 NA NA en en R 8 0.7273 0.717 0.521 NA NA Antp Antp D 6 0.5455 0.913 0.498 NA NA Total matches= 7 (4 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 10 (15.38%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_46::chr3L:10871817-10873573(.)) Mean nb of predicted sites per peak: 1.40	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 23   positions_7nt_m1	k-mer sig=3.77; evalue=0.00017 rwaCTATCGATaGtwy RWACTATCGATAGTWY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rwaCTATCGATaGtwy Dref Dref R 10 0.6250 0.887 0.554 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 31 (47.69%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.71	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 24   positions_7nt_m2	k-mer sig=3.77; evalue=0.00017 awacTATCGATrgt ACYATCGATAGTWT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor awacTATCGATrgt Dref Dref R 10 0.7143 0.881 0.629 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 40 (61.54%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_71::chr3R:18412826-18413041(.)) Mean nb of predicted sites per peak: 2.23	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 25   dyads_m1	k-mer sig=37.50; evalue=3.2e-38 tsratactATCGATAGTatCGmsk MSKCGATACTATCGATAGTATYSA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tsratactATCGATAGTatCGmsk Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (43.08%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.54	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 26   dyads_m2	k-mer sig=37.50; evalue=3.2e-38 smwmyatCGATAsTATCGatgkyk MRMCATCGATASTATCGATRKWKS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor smwmyatCGATAsTATCGatgkyk Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 27 (41.54%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.44	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 27   dyads_m3	k-mer sig=37.50; evalue=3.2e-38 wkyCGATAsTATCGATaswatcga TCGATWSTATCGATASTATCGRMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkyCGATAsTATCGATaswatcga Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 26 (40.00%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.19	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 28   dyads_m4	k-mer sig=4.47; evalue=3.4e-05 wrwAAAATAtwk MWATATTTTWYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrwAAAATAtwk hb hb D 9 0.7500 0.702 0.526 NA NA br-Z3 br-Z3 R 9 0.6429 0.715 0.460 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (35.38%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_116::chrX:5737857-5738203(.)) Mean nb of predicted sites per peak: 1.39	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 29   dyads_m5	k-mer sig=1.89; evalue=0.013 ssGGCAGCAAaa TTTTGCTGCCSS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ssGGCAGCAAaa Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 13 (20.00%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_6::chr2L:6088361-6088670(.)) Mean nb of predicted sites per peak: 1.31	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 30   dyads_m6	k-mer sig=1.67; evalue=0.021 vhCAAAAACym KRGTTTTTGDB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vhCAAAAACym hb hb D 9 0.8182 0.764 0.625 NA NA cad cad R 8 0.6667 0.795 0.530 NA NA pan pan D 6 0.5455 0.886 0.483 NA NA Total matches= 3		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 6 (9.23%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_10::chr2L:7297537-7298811(.)) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 31   dyads_m7	k-mer sig=1.45; evalue=0.035 crCCGCtGCCsy RSGGCAGCGGYG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor crCCGCtGCCsy Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (21.54%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_43::chr3L:8203015-8203253(.)) Mean nb of predicted sites per peak: 1.71	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 32   dyads_m8	k-mer sig=2.09; evalue=0.0081 whTATAAATAttw WAATATTTATADW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor whTATAAATAttw br-Z4 br-Z4 R 8 0.6154 0.815 0.502 NA NA cad cad R 8 0.5714 0.723 0.413 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 14 (21.54%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_46::chr3L:10871817-10873573(.)) Mean nb of predicted sites per peak: 1.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 33   dyads_m9	k-mer sig=37.50; evalue=3.2e-38 ghwcyatCGATAsTATCGayrg CYRTCGATASTATCGATRGWDC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ghwcyatCGATAsTATCGayrg Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 29 (44.62%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.45	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 34   dyads_m10	k-mer sig=0.95; evalue=0.11 syACGymssrwgykmsmbsckysTGCsr YSGCASRMGSVKSKMRCWYSSKRCGTRS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor syACGymssrwgykmsmbsckysTGCsr Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 21 (32.31%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 1.19	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title TnaA_WD_ALL+ -i $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6

Warning: Not a single pattern was found in file tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6/results/local_words_6nt/peak-motifs_local_words-2str-noov_6nt_windgroup50.tab

Warning: Not a single pattern was found in file tmp/www-data/2025/04/28/peak-motifs.2025-04-28.204023_2025-04-28.204023_gX3AM6/results/local_words_7nt/peak-motifs_local_words-2str-noov_7nt_windgroup50.tab