; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/29/oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/29/oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/29/oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/04/29/oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/04/29/oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 28 16 12 6 3 1 3 3 74 56 33 20 22
c 15 21 4 71 69 1 72 2 3 8 9 13 16
g 10 10 11 1 4 0 1 1 2 6 10 23 20
t 27 33 53 2 4 78 4 74 1 10 28 24 22
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m1_rc.png
;
a 95 88 76 19 14 225 22 246 17 235 97 89
c 56 58 51 8 9 7 16 4 216 8 45 55
g 37 32 40 10 11 12 197 5 9 7 42 39
t 70 80 91 221 224 14 23 3 16 8 74 75
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m2_rc.png
;
a 9 9 1 33 0 0 0 0 33 6 9
c 3 5 10 0 33 33 0 0 0 13 4
g 3 14 7 0 0 0 33 0 0 6 4
t 18 5 15 0 0 0 0 33 0 8 16
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m3_rc.png
;
a 16 21 3 64 62 5 3 4 0 9 22 22
c 18 13 2 1 1 2 2 1 65 50 14 17
g 11 15 4 2 2 0 62 3 0 3 18 17
t 24 20 60 2 4 62 2 61 4 7 15 13
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m4_rc.png
;
a 85 72 25 11 15 240 236 19 230 90 75
c 67 52 195 14 221 9 9 231 10 49 76
g 46 64 9 6 9 3 5 6 6 62 47
t 64 74 33 231 17 10 12 6 16 61 64
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m5_rc.png
;
a 41 51 6 5 10 130 9 12 136 51 46
c 26 29 138 137 4 8 4 127 6 35 33
g 33 30 2 3 4 6 7 4 2 39 25
t 54 44 8 9 136 10 134 11 10 29 50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m6_rc.png
;
a 196 247 533 528 73 540 535 541 41 206 197
c 94 101 21 16 48 14 17 10 26 87 116
g 91 129 19 18 421 15 10 16 14 109 92
t 211 115 19 30 50 23 30 25 511 190 187
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m7_rc.png
;
a 28 31 15 56 81 1 5 4 75 79 34 32
c 27 15 53 11 2 81 75 1 2 2 21 16
g 11 15 7 7 0 1 2 2 3 0 10 12
t 19 24 10 11 2 2 3 78 5 4 20 25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m8_rc.png
;
a 18 22 49 0 49 49 0 0 13 23
c 4 9 0 0 0 0 49 0 11 11
g 8 12 0 0 0 0 0 49 15 3
t 19 6 0 49 0 0 0 0 10 12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m9_rc.png
;
a 17 13 45 45 0 0 0 0 13 17
c 6 11 0 0 0 0 45 45 11 13
g 8 9 0 0 45 0 0 0 10 5
t 14 12 0 0 0 45 0 0 11 10
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m10_rc.png
;
a 57 55 128 10 5 14 139 9 138 48 58
c 36 31 10 5 3 10 1 133 5 34 22
g 27 30 6 137 141 1 9 5 6 28 20
t 36 40 12 4 7 131 7 9 7 46 56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m11_rc.png
;
a 82 72 17 229 213 28 222 17 223 75 93
c 54 53 11 2 15 8 13 198 4 40 53
g 44 59 203 4 8 197 4 14 9 54 34
t 65 61 14 10 9 12 6 16 9 76 65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m12_rc.png
;
a 76 68 13 22 227 218 21 215 21 91 75
c 47 48 206 203 7 10 12 11 198 61 51
g 51 52 9 7 2 2 12 4 8 33 51
t 67 73 13 9 5 11 196 11 14 56 64
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m13_rc.png
;
a 56 50 15 7 15 10 167 14 164 63 67
c 41 41 6 9 147 159 3 10 4 42 34
g 24 29 154 8 11 4 4 4 5 24 37
t 59 60 5 156 7 7 6 152 7 51 42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m14_rc.png
;
a 42 34 8 6 7 8 6 136 128 49 46 39
c 27 28 7 7 5 123 7 3 3 22 18 28
g 30 31 115 127 1 4 11 5 6 26 32 26
t 47 53 16 6 133 11 122 2 9 49 50 53
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m15_rc.png
;
a 131 128 311 306 34 15 18 24 315 118 120
c 62 78 10 13 254 6 18 290 9 65 89
g 57 75 6 6 15 13 22 14 5 62 55
t 89 58 12 14 36 305 281 11 10 94 75
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m16_rc.png
;
a 107 101 275 17 273 28 279 30 283 111 126
c 59 76 8 11 11 16 12 246 9 54 57
g 45 55 10 7 15 243 4 14 12 65 48
t 98 77 16 274 10 22 14 19 5 79 78
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m17_rc.png
;
a 40 30 19 12 4 5 5 6 102 25 88 34 37
c 28 39 9 104 110 3 114 2 6 76 10 23 26
g 20 27 12 5 5 2 1 1 6 11 10 36 28
t 40 32 88 7 9 118 8 119 14 16 20 35 37
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m18_rc.png
;
a 101 75 242 234 20 239 30 20 238 115 96
c 48 50 6 11 10 10 7 10 7 39 35
g 45 85 6 4 226 7 215 217 13 56 67
t 71 55 11 16 9 9 13 18 7 55 67
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m19_rc.png
;
a 51 75 180 177 13 13 7 8 5 44 60
c 46 53 5 8 6 12 179 5 11 37 38
g 38 34 9 10 171 167 6 2 11 49 46
t 70 43 11 10 15 13 13 190 178 75 61
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/29//oligo-analysis_2025-04-29.094235_6St5uK_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-04-29.094246
; Job done 2025-04-29.094252
; Seconds 0.28
; user 0.28
; system 0.16
; cuser 4.79
; csystem 0.73