RSAT - peak-motifs result

Analysis: TnaA_WD_ALL_1kbaround (29/04/2025 00:03)

peak-motifs  -v 1 -title TnaA_WD_ALL_1kbaround -i $RSAT/public_html/tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan

motif discovery
oligos_6nt_mkv2	oligos_6nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=28.25; e-value=5.6e-29) RC: cgatactatcgatagtatcg oligos_6nt_mkv2_m2 assembly: gggcagcagcg (sig=12.78; e-value=1.7e-13) RC: cgctgctgccc oligos_6nt_mkv2_m3 assembly: atttatttaataaataa (sig=11.59; e-value=2.6e-12) RC: ttatttattaaataaat oligos_6nt_mkv2_m4 assembly: ccgccgccca (sig=6.66; e-value=2.2e-07) RC: tgggcggcgg oligos_6nt_mkv2_m5 assembly: aaaataaatatttatttt (sig=11.59; e-value=2.6e-12) RC: aaaataaatatttatttt oligos_6nt_mkv2_m6 assembly: aacaacaaa (sig=5.63; e-value=2.3e-06) RC: tttgttgtt oligos_6nt_mkv2_m7 assembly: gctcctccttg (sig=5.56; e-value=2.8e-06) RC: caaggaggagc oligos_6nt_mkv2_m8 assembly: tcgatactatcgatggc (sig=28.25; e-value=5.6e-29) RC: gccatcgatagtatcga oligos_6nt_mkv2_m9 assembly: ttgaagaagac (sig=4.48; e-value=3.3e-05) RC: gtcttcttcaa oligos_6nt_mkv2_m10 assembly: aggtggt (sig=3.75; e-value=0.00018) RC: accacct	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_6nt	Not a single significant pattern	[local_words_6nt]
positions_6nt	positions_6nt_m1 assembly: ctatcgatag (sig=63.47; e-value=3.4e-64) RC: ctatcgatag positions_6nt_m2 assembly: catcgatag (sig=63.47; e-value=3.4e-64) RC: ctatcgatg positions_6nt_m3 assembly: acacac (sig=1.11; e-value=0.078) RC: gtgtgt positions_6nt_m4 : (sig=; e-value=1) RC: positions_6nt_m5 : (sig=; e-value=1) RC: positions_6nt_m6 : (sig=; e-value=1) RC: positions_6nt_m7 : (sig=; e-value=1) RC: positions_6nt_m8 : (sig=; e-value=1) RC: positions_6nt_m9 : (sig=; e-value=1) RC: positions_6nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv2	oligos_7nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=26.25; e-value=5.6e-27) RC: cgatactatcgatagtatcg oligos_7nt_mkv2_m2 assembly: gagcagcagc (sig=11.80; e-value=1.6e-12) RC: gctgctgctc oligos_7nt_mkv2_m3 assembly: acatcgatactatcgatgt (sig=26.25; e-value=5.6e-27) RC: acatcgatagtatcgatgt oligos_7nt_mkv2_m4 assembly: atatttatttaattt (sig=9.10; e-value=7.9e-10) RC: aaattaaataaatat oligos_7nt_mkv2_m5 assembly: acacacac (sig=8.91; e-value=1.2e-09) RC: gtgtgtgt oligos_7nt_mkv2_m6 assembly: acaacaaca (sig=8.54; e-value=2.9e-09) RC: tgttgttgt oligos_7nt_mkv2_m7 assembly: tgccgccgcccacc (sig=6.23; e-value=5.9e-07) RC: ggtgggcggcggca oligos_7nt_mkv2_m8 assembly: agaagaaga (sig=4.63; e-value=2.3e-05) RC: tcttcttct oligos_7nt_mkv2_m9 assembly: ggaggagc (sig=4.51; e-value=3.1e-05) RC: gctcctcc oligos_7nt_mkv2_m10 assembly: cagcaacaacaaat (sig=8.54; e-value=2.9e-09) RC: atttgttgttgctg	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_7nt	Not a single significant pattern	[local_words_7nt]
positions_7nt	positions_7nt_m1 assembly: tatcgata (sig=42.02; e-value=9.5e-43) RC: tatcgata positions_7nt_m2 : (sig=; e-value=1) RC: positions_7nt_m3 : (sig=; e-value=1) RC: positions_7nt_m4 : (sig=; e-value=1) RC: positions_7nt_m5 : (sig=; e-value=1) RC: positions_7nt_m6 : (sig=; e-value=1) RC: positions_7nt_m7 : (sig=; e-value=1) RC: positions_7nt_m8 : (sig=; e-value=1) RC: positions_7nt_m9 : (sig=; e-value=1) RC: positions_7nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
dyads	dyads_m1 assembly: ctatcgatag (sig=44.15; e-value=7.1e-45) RC: ctatcgatag dyads_m2 assembly: ttaaaaatataaataaatat (sig=25.47; e-value=3.4e-26) RC: atatttatttatatttttaa dyads_m3 assembly: ggcagcagcagcagc (sig=24.51; e-value=3.1e-25) RC: gctgctgctgctgcc dyads_m4 assembly: cacacacacac (sig=20.47; e-value=3.4e-21) RC: gtgtgtgtgtg dyads_m5 assembly: accacc (sig=11.83; e-value=1.5e-12) RC: ggtggt dyads_m6 assembly: attatttatttaa (sig=25.47; e-value=3.4e-26) RC: ttaaataaataat dyads_m7 assembly: ttaaaaac (sig=11.04; e-value=9.1e-12) RC: gtttttaa dyads_m8 assembly: ttaaataaataaaaac (sig=25.47; e-value=3.4e-26) RC: gtttttatttatttaa dyads_m9 assembly: caannncaa (sig=8.83; e-value=1.5e-09) RC: ttgnnnttg dyads_m10 assembly: taatnnnnnaaaaaaat (sig=9.32; e-value=4.8e-10) RC: atttttttnnnnnatta	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv2_m1	k-mer sig=28.25; evalue=5.6e-29 gkCgataCTATCGATAGtatcGmc GKCGATACTATCGATAGTATCGMC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gkCgataCTATCGATAGtatcGmc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 34 (36.17%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_81::chr3R:30038729-30040729()) Mean nb of predicted sites per peak: 3.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv2_m2	k-mer sig=12.78; evalue=1.7e-13 rgsrGCAGCAGCrrs SYYGCTGCTGCYSCY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rgsrGCAGCAGCrrs Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 49 (52.13%) Max nb of predicted sites per peak: 13  (TnaA-WD_peak_16::chr2L:13497599-13499599()) Mean nb of predicted sites per peak: 3.29	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv2_m3	k-mer sig=11.59; evalue=2.6e-12 wwATTTatTTAATAAATAaww WWTTATTTATTAAATAAATWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwATTTatTTAATAAATAaww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 55 (58.51%) Max nb of predicted sites per peak: 15  (TnaA-WD_peak_37::chr2R:22936764-22938764()) Mean nb of predicted sites per peak: 3.93	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv2_m4	k-mer sig=6.66; evalue=2.2e-07 cgCCGCCGCCCAcs SGTGGGCGGCGGCG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cgCCGCCGCCCAcs Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 39 (41.49%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_45::chr3L:9142959-9144959()) Mean nb of predicted sites per peak: 2.18	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv2_m5	k-mer sig=11.59; evalue=2.6e-12 ywaAaATAaATATtTATtTtwr YWAAAATAAATATTTATTTTWR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ywaAaATAaATATtTATtTtwr Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 45 (47.87%) Max nb of predicted sites per peak: 17  (TnaA-WD_peak_18::chr2L:16256640-16258640()) Mean nb of predicted sites per peak: 4.78	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_6nt_mkv2_m6	k-mer sig=5.63; evalue=2.3e-06 amAACAACAAaww WWTTTGTTGTTKT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor amAACAACAAaww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 39 (41.49%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_77::chr3R:29062784-29064784()) Mean nb of predicted sites per peak: 1.87	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_6nt_mkv2_m7	k-mer sig=5.56; evalue=2.8e-06 cwGCTCCTCCttGkc GMCAAGGAGGAGCWG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cwGCTCCTCCttGkc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 41 (43.62%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_39::chr2R:23855972-23857972()) Mean nb of predicted sites per peak: 2.07	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_6nt_mkv2_m8	k-mer sig=28.25; evalue=5.6e-29 hdtCGATAsTATCGatrgctm KAGCYATCGATASTATCGAHD	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor hdtCGATAsTATCGatrgctm Dref Dref R 10 0.4762 0.869 0.414 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 41 (43.62%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_117::chrX:10744104-10746104()) Mean nb of predicted sites per peak: 2.37	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   oligos_6nt_mkv2_m9	k-mer sig=4.48; evalue=3.3e-05 dstTGAAGAAGAasa TSTTCTTCTTCAASH	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor dstTGAAGAAGAasa Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 26 (27.66%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_4::chr2L:6078093-6080093()) Mean nb of predicted sites per peak: 1.54	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   oligos_6nt_mkv2_m10	k-mer sig=3.75; evalue=0.00018 vsAGGTGGTsk MSACCACCTSB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vsAGGTGGTsk sna sna D 8 0.6667 0.735 0.490 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 30 (31.91%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_45::chr3L:9142959-9144959()) Mean nb of predicted sites per peak: 1.30	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   positions_6nt_m1	k-mer sig=63.47; evalue=3.4e-64 wrCTATCGATAGyw WRCTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrCTATCGATAGyw Dref Dref R 10 0.7143 0.896 0.640 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 43 (45.74%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_123::chrX:23105028-23107028()) Mean nb of predicted sites per peak: 3.21	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   positions_6nt_m2	k-mer sig=63.47; evalue=3.4e-64 rcyATCGATAGyw WRCTATCGATRGY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rcyATCGATAGyw Dref Dref D 10 0.7692 0.903 0.695 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 50 (53.19%) Max nb of predicted sites per peak: 9  (TnaA-WD_peak_123::chrX:23105028-23107028()) Mean nb of predicted sites per peak: 2.92	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   positions_6nt_m3	k-mer sig=1.11; evalue=0.078 aCACACACac GTGTGTGTGT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aCACACACac twi twi D 7 0.6364 0.719 0.457 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 45 (47.87%) Max nb of predicted sites per peak: 17  (TnaA-WD_peak_118::chrX:17826563-17828563()) Mean nb of predicted sites per peak: 3.58	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   oligos_7nt_mkv2_m1	k-mer sig=26.25; evalue=5.6e-27 ktCGataCTATCGATAGtatCGam KTCGATACTATCGATAGTATCGAM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ktCGataCTATCGATAGtatCGam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 31 (32.98%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_81::chr3R:30038729-30040729()) Mean nb of predicted sites per peak: 2.61	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   oligos_7nt_mkv2_m2	k-mer sig=11.80; evalue=1.6e-12 agsAGCAGCAGCag CTGCTGCTGCTSCT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor agsAGCAGCAGCag Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 45 (47.87%) Max nb of predicted sites per peak: 19  (TnaA-WD_peak_64::chr3R:9017134-9019134()) Mean nb of predicted sites per peak: 4.16	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   oligos_7nt_mkv2_m3	k-mer sig=26.25; evalue=5.6e-27 mkmyatCGATAsTATCGatrkwk MWMYATCGATASTATCGATRKMK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mkmyatCGATAsTATCGatrkwk Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 34 (36.17%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_32::chr2R:15931015-15933015()) Mean nb of predicted sites per peak: 2.50	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   oligos_7nt_mkv2_m4	k-mer sig=9.10; evalue=7.9e-10 wwATATTTATTTAatTwwt AWWAATTAAATAAATATWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwATATTTATTTAatTwwt Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 60 (63.83%) Max nb of predicted sites per peak: 14  (TnaA-WD_peak_73::chr3R:21096857-21098857()) Mean nb of predicted sites per peak: 3.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   oligos_7nt_mkv2_m5	k-mer sig=8.91; evalue=1.2e-09 aCACACACACac GTGTGTGTGTGT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aCACACACACac Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 41 (43.62%) Max nb of predicted sites per peak: 25  (TnaA-WD_peak_118::chrX:17826563-17828563()) Mean nb of predicted sites per peak: 6.15	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   oligos_7nt_mkv2_m6	k-mer sig=8.54; evalue=2.9e-09 caaCAACAACArm KYTGTTGTTGTTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor caaCAACAACArm Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 40 (42.55%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_64::chr3R:9017134-9019134()) Mean nb of predicted sites per peak: 2.90	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   oligos_7nt_mkv2_m7	k-mer sig=6.23; evalue=5.9e-07 scyGCCGCCGCCCaCscc GGSGTGGGCGGCGGCRGS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor scyGCCGCCGCCCaCscc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 41 (43.62%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_55::chr3L:19143044-19145044()) Mean nb of predicted sites per peak: 2.68	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 21   oligos_7nt_mkv2_m8	k-mer sig=4.63; evalue=2.3e-05 graGAAGAAGAav BTTCTTCTTCTYC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor graGAAGAAGAav Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 34 (36.17%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_78::chr3R:29590832-29592832()) Mean nb of predicted sites per peak: 1.71	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 22   oligos_7nt_mkv2_m9	k-mer sig=4.51; evalue=3.1e-05 saGGAGGAGCcg CGGCTCCTCCTS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor saGGAGGAGCcg Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 39 (41.49%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_23::chr2L:20311115-20313115()) Mean nb of predicted sites per peak: 1.74	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 23   oligos_7nt_mkv2_m10	k-mer sig=8.54; evalue=2.9e-09 arCAgCAACAACAacarc GYTGTTGTTGTTGCTGYT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor arCAgCAACAACAacarc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 45 (47.87%) Max nb of predicted sites per peak: 18  (TnaA-WD_peak_64::chr3R:9017134-9019134()) Mean nb of predicted sites per peak: 4.02	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 24   positions_7nt_m1	k-mer sig=42.02; evalue=9.5e-43 rcTATCGATAgy RCTATCGATAGY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rcTATCGATAgy Dref Dref D 10 0.8333 0.917 0.764 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 47 (50.00%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_123::chrX:23105028-23107028()) Mean nb of predicted sites per peak: 3.43	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 25   dyads_m1	k-mer sig=44.15; evalue=7.1e-45 wrCTATCGATAGyw WRCTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrCTATCGATAGyw Dref Dref R 10 0.7143 0.896 0.640 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 43 (45.74%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_123::chrX:23105028-23107028()) Mean nb of predicted sites per peak: 3.21	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 26   dyads_m2	k-mer sig=25.47; evalue=3.4e-26 wwwtAaAaATATAaATAaAtataw WTATATTTATTTATATTTTTAWWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwwtAaAaATATAaATAaAtataw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 56 (59.57%) Max nb of predicted sites per peak: 20  (TnaA-WD_peak_31::chr2R:15847138-15849138()) Mean nb of predicted sites per peak: 4.88	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 27   dyads_m3	k-mer sig=24.51; evalue=3.1e-25 gcrGCAGCAGCAGCAGCag CTGCTGCTGCTGCTGCYGC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gcrGCAGCAGCAGCAGCag Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 42 (44.68%) Max nb of predicted sites per peak: 22  (TnaA-WD_peak_16::chr2L:13497599-13499599()) Mean nb of predicted sites per peak: 6.38	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 28   dyads_m4	k-mer sig=20.47; evalue=3.4e-21 CaCACACACACACaC GTGTGTGTGTGTGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor CaCACACACACACaC Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 36 (38.30%) Max nb of predicted sites per peak: 31  (TnaA-WD_peak_71::chr3R:18411934-18413934()) Mean nb of predicted sites per peak: 8.81	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 29   dyads_m5	k-mer sig=11.83; evalue=1.5e-12 csACCACCws SWGGTGGTSG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor csACCACCws Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 47 (50.00%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_16::chr2L:13497599-13499599()) Mean nb of predicted sites per peak: 1.70	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 30   dyads_m6	k-mer sig=25.47; evalue=3.4e-26 wwatTATTTATTTAaww WWTTAAATAAATAATWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwatTATTTATTTAaww br-Z4 br-Z4 D 8 0.4706 0.857 0.403 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 55 (58.51%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_73::chr3R:21096857-21098857()) Mean nb of predicted sites per peak: 2.60	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 31   dyads_m7	k-mer sig=11.04; evalue=9.1e-12 wwTTAAAAACww WWGTTTTTAAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTTAAAAACww hb hb D 9 0.7500 0.797 0.597 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 29 (30.85%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_84::chr4:42814-44814()) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 32   dyads_m8	k-mer sig=25.47; evalue=3.4e-26 wwtTAAATAAAtAAAAAyww WWRTTTTTATTTATTTAAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwtTAAATAAAtAAAAAyww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 56 (59.57%) Max nb of predicted sites per peak: 12  (TnaA-WD_peak_31::chr2R:15847138-15849138()) Mean nb of predicted sites per peak: 2.86	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 33   dyads_m9	k-mer sig=8.83; evalue=1.5e-09 mrCAAsarCAAmm KKTTGYTSTTGYK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mrCAAsarCAAmm Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 48 (51.06%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_23::chr2L:20311115-20313115()) Mean nb of predicted sites per peak: 1.75	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 34   dyads_m10	k-mer sig=9.32; evalue=4.8e-10 wwTAATwwwwwAAAAAAAtaw WTATTTTTTTWWWWWATTAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTAATwwwwwAAAAAAAtaw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 60 (63.83%) Max nb of predicted sites per peak: 9  (TnaA-WD_peak_13::chr2L:8540685-8542685()) Mean nb of predicted sites per peak: 2.78	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title TnaA_WD_ALL_1kbaround -i $RSAT/public_html/tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan

Warning: Not a single pattern was found in file tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan/results/local_words_6nt/peak-motifs_local_words-2str-noov_6nt_windgroup50.tab

Warning: Not a single pattern was found in file tmp/www-data/2025/04/29/peak-motifs.2025-04-29.000107_2025-04-29.000107_DhTyan/results/local_words_7nt/peak-motifs_local_words-2str-noov_7nt_windgroup50.tab