

rsync -ruptl /var/www/html/rsat/perl-scripts/lib/js /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac


rsync -ruptl /var/www/html/rsat/public_html/images/program_icons/matrix-clustering_icons /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_query_matrices.meme -from meme -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_input_motifs_processed_1.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_input_motifs_processed_1.tf -from tf -to transfac -prefix_id ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_input_motifs_processed.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_input_motifs_processed.tf  > /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -split -from tf -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/motif


 cat /var/www/html/rsat/R-scripts/matrix-clustering.R | /usr/bin/R --slave --no-save --no-restore --no-environ --args " infile = '/var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/pairwise_compa.tab'; hclust.method = 'average'; description.file = '/var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab'; distance.table = '/var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/distance_table.tab'; alignment.file = '/var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/alignment_table.tab'; verbosity = 0; metric = 'Ncor'; heatmap.color.palette = 'YlOrRd'; heatmap.color.classes = '9'; export.newick = 0; radial.only = 0; draw.heatmap = 0; draw.consensus = 0; pos.hclust.in.heatmap = 'column'; lthsp = 'Ncor_0.4_cor_0.6_'; out.prefix = '/var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering'; "


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_1_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_1_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_2_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_2_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_3_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_3_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_4_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_4_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_5_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_5_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_6_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_6_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/cluster_7_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_data/cluster_7_transfac_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m1_MA1219.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_1/cluster_1_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m2_MA1222.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_2/cluster_2_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m3_MA1232.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_3/cluster_3_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_2/cluster_2_matrices_temp.tf -from tf -to tf  -attr name cluster_2 -attr accession cluster_2 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1222.1' -set_attr merged_ID 'MA1222.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_2/cluster_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_1/cluster_1_matrices_temp.tf -from tf -to tf  -attr name cluster_1 -attr accession cluster_1 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1219.1' -set_attr merged_ID 'MA1219.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_1/cluster_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_3/cluster_3_matrices_temp.tf -from tf -to tf  -attr name cluster_3 -attr accession cluster_3 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1232.1' -set_attr merged_ID 'MA1232.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_3/cluster_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_2/cluster_2_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_1/cluster_1_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_3/cluster_3_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m4_MA1233.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_4/cluster_4_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m5_MA1234.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m6_MA1248.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices_temp.tf -from tf -to tf  -attr name cluster_5 -attr accession cluster_5 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1234.1' -set_attr merged_ID 'MA1234.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_4/cluster_4_matrices_temp.tf -from tf -to tf  -attr name cluster_4 -attr accession cluster_4 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1233.2' -set_attr merged_ID 'MA1233.2' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_4/cluster_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices_temp.tf -from tf -to tf  -attr name cluster_6 -attr accession cluster_6 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1248.1' -set_attr merged_ID 'MA1248.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_4/cluster_4_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_5/cluster_5_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_6/cluster_6_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1_m7_MA1263.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices_temp.tf -from tf -to tf  -attr name cluster_7 -attr accession cluster_7 -set_attr merged_AC 'ma1219.1_ma1222.1_ma1232.1_ma1233.2_ma1234.1_ma1248.1_ma1263.1:::MA1263.1' -set_attr merged_ID 'MA1263.1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_clusters_information/cluster_7/cluster_7_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


rm -r /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_pairwise_compa_logos


cp /var/www/html/rsat/public_html/templates_html/display_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_logo_tree.html


cp /var/www/html/rsat/public_html/templates_html/display_small_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_portable_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_temporary.html /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_portable_logo_tree.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_html/pairwise_compa_matrix_descriptions.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/distance_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/distance_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/alignment_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/alignment_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/clusters.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/clusters.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/clusters_motif_names.tab -o /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_tables/clusters_motif_names.html


mv -f /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2025/05/14/matrix-clustering_2025-05-14.125904_RjhXac/matrix-clustering_portable_logo_tree.html
