; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	33	23	83	6	4	77	64	0	80	27	29
c	12	14	1	1	79	1	10	78	5	19	26
g	20	19	1	71	1	2	8	4	2	22	10
t	23	32	3	10	4	8	6	6	1	20	23
//
; Sites	88
>site_0
ATCGCAACACA
>site_1
GCAGCACCAGG
>site_2
GAAGCTACACG
>site_3
GAAGCTACACG
>site_4
TGAGCACCACA
>site_5
TCAGCATCACC
>site_6
AGAGCAACGAC
>site_7
ACAGCCACACA
>site_8
ATAACAACAGT
>site_9
TTAGCAACTGT
>site_10
GTAGCAACCGA
>site_11
GGAGCAACCGC
>site_12
GCTGCAACAGC
>site_13
GCTGCAACAAT
>site_14
GAAGCACCACA
>site_15
TTAGCACCAAG
>site_16
ATAGAAACACC
>site_17
CAAGCAGCAGA
>site_18
ACAGAAACATC
>site_19
AGAGCATCACT
>site_20
CGAGGAACAGT
>site_21
AGAGCATCACA
>site_22
ACAGCACCAGC
>site_23
AGAGCAACGAG
>site_24
CAAGAAACATA
>site_25
ATAGCAAGATC
>site_26
ATAACAACAGC
>site_27
CCAGCACCAAT
>site_28
TTATCAACAGC
>site_29
ATAGCTACAAA
>site_30
ATAGCAAGAGT
>site_31
CGAGCAAGACC
>site_32
AGATCAACAAT
>site_33
CAAGCTACAAC
>site_34
GAAGCTACAAG
>site_35
TGAGCAATATA
>site_36
AGGGCAACAAA
>site_37
GAAGCAACAAC
>site_38
CTAGCTACAAC
>site_39
TGAGCAGCACT
>site_40
CTAGCAACATA
>site_41
GTATCAACAGG
>site_42
GTAGTAACAGG
>site_43
TAAACAACACC
>site_44
AAAGCAGCAAT
>site_45
TTAGTAACACC
>site_46
ATAGCAGCAAA
>site_47
AAATCAACAGA
>site_48
AAATCAACACT
>site_49
ATACCAACATT
>site_50
ATAGCAATAAT
>site_51
TGATCAACATA
>site_52
ACATCAACAAT
>site_53
GAAGCAACATA
>site_54
AAAGCAGCATT
>site_55
GGAGCATCATT
>site_56
TTAGCAATATG
>site_57
GAAGCTACAGG
>site_58
ATAGCACCATT
>site_59
ATAGCAGCAAA
>site_60
GTAGCACCATA
>site_61
AAAGCAGCAAT
>site_62
CGAGCACCATC
>site_63
ATAGCAACAGA
>site_64
AAAGCAACCTC
>site_65
GAAGAAACAAA
>site_66
TCAGCAACCAC
>site_67
TAAACAACACA
>site_68
TTAGCAAGATA
>site_69
TTAGTAACAAT
>site_70
CTAGTAACAAT
>site_71
TCAGCTACATT
>site_72
CTAGCAATAAA
>site_73
TTAGCATCAGT
>site_74
TCAGCGACAGA
>site_75
ATAGCAGCACC
>site_76
TATGCAACACC
>site_77
CGATCAACAAA
>site_78
TAAGCAATATA
>site_79
GGAGCACCAGC
>site_80
GGATCAACAAC
>site_81
TCAACAACATA
>site_82
AGAGCGACAGC
>site_83
TCATCAACACT
>site_84
GTAGCATCATC
>site_85
ATAGCAATAGC
>site_86
AAAACAACAAA
>site_87
TAAGCAACCAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	14	19	2	54	53	4	7	3	51	18	19
c	9	8	1	0	1	0	44	2	3	8	14
g	16	11	51	2	1	3	2	48	2	10	13
t	19	20	4	2	3	51	5	5	2	22	12
//
; Sites	58
>site_0
CTGAATAGAGA
>site_1
CTGAATCGCTC
>site_2
CAGAATCGCGT
>site_3
TCGAAGCGAAG
>site_4
GAGAATTGAAG
>site_5
TTGAATCGTCT
>site_6
CCGACTCGAAG
>site_7
TGGAATGGATA
>site_8
GTGAATAGAAA
>site_9
TTGAATCGCCC
>site_10
TTGAATAGATG
>site_11
CAGGATCGACC
>site_12
AGGATTCGAAC
>site_13
TTGATTCGATA
>site_14
TCGAATCAATG
>site_15
GCGAATTGAGT
>site_16
GAGTATCGACT
>site_17
AGGTATCGATA
>site_18
TGGAAACGATA
>site_19
TAGAATGGAAA
>site_20
GCGAATCTATC
>site_21
AAGAATAGAGC
>site_22
CCCAATCGAGC
>site_23
GTTAATCGAGG
>site_24
AGGAATCGGAA
>site_25
TCGAAACGAGG
>site_26
GAGGATCGATG
>site_27
AAGAAACGATG
>site_28
GAGAATCGAAC
>site_29
AGGAATAGATC
>site_30
GAGAATCGAAC
>site_31
ACGAATCCAAT
>site_32
GTGAATTGATA
>site_33
GTGAATCAATT
>site_34
TAGAATCTAAT
>site_35
TGGAATAGAGT
>site_36
GTGAATCCAAC
>site_37
AGGATTCGAAG
>site_38
ATGAATTGATA
>site_39
AAGAATAGAAG
>site_40
TGTAATCGACT
>site_41
TGGAGTCGATT
>site_42
ATGAATCTATA
>site_43
GTGAATCAATA
>site_44
TTGAATCGGAC
>site_45
CAGAAACGACA
>site_46
GATAATCGATG
>site_47
CTAAATCGAGA
>site_48
AAAAATCGAGC
>site_49
TAGAATCTACA
>site_50
GTGAATTGACC
>site_51
TGGAATCTAAT
>site_52
CAGAATCGATG
>site_53
TTGAATCGAAA
>site_54
GTTAATCGAAA
>site_55
AAGAAGCGATA
>site_56
AAGAAGCGATA
>site_57
TTGAATCGTTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	7	4	2	20	0	0	1	19	2	1	9	4
c	4	4	18	0	2	20	1	1	0	1	5	7
g	7	5	1	0	1	1	20	2	0	18	4	4
t	4	9	1	2	19	1	0	0	20	2	4	7
//
; Sites	22
>site_0
AACTTCGATGGC
>site_1
GCCATCGAAGTT
>site_2
CACATCGAAGAC
>site_3
GTCTTCGATGTG
>site_4
CTCATCGATAAA
>site_5
TTTATCGATGAG
>site_6
GGCATCGCTGGC
>site_7
GCCAGCGATGCC
>site_8
CGCATCAATGGC
>site_9
GCCATTGATGCG
>site_10
AGGATCGATGTT
>site_11
AACATCGATCCT
>site_12
TACATCCATGAC
>site_13
GTCATGGATGTA
>site_14
ATAATCGATGAG
>site_15
CTCATCGATTAT
>site_16
AGAATCGATGAA
>site_17
TTCATCGATTCT
>site_18
TTCATCGGTGGT
>site_19
ACCACCGATGAA
>site_20
ATCATCGGTGCC
>site_21
GGCACCGATGAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	15	10	33	33	33	0	33	33	0	12	17
c	6	10	0	0	0	0	0	0	0	4	5
g	4	6	0	0	0	0	0	0	0	10	2
t	8	7	0	0	0	33	0	0	33	7	9
//
; Sites	33
>site_0
AAAAATAATCA
>site_1
CAAAATAATAC
>site_2
AAAAATAATTT
>site_3
CCAAATAATGC
>site_4
AAAAATAATGT
>site_5
GTAAATAATGA
>site_6
CGAAATAATAA
>site_7
TCAAATAATCA
>site_8
ACAAATAATGA
>site_9
TAAAATAATAA
>site_10
TCAAATAATTT
>site_11
CTAAATAATGT
>site_12
ACAAATAATGA
>site_13
GCAAATAATTT
>site_14
GAAAATAATAA
>site_15
ACAAATAATGG
>site_16
TGAAATAATAC
>site_17
ATAAATAATTA
>site_18
TAAAATAATTA
>site_19
ACAAATAATAA
>site_20
TAAAATAATAG
>site_21
AAAAATAATAA
>site_22
ACAAATAATTA
>site_23
AAAAATAATAA
>site_24
CTAAATAATGC
>site_25
AGAAATAATAA
>site_26
CTAAATAATAC
>site_27
AGAAATAATTT
>site_28
TTAAATAATGT
>site_29
ATAAATAATCA
>site_30
AGAAATAATAT
>site_31
TCAAATAATCA
>site_32
GGAAATAATGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	22	20	2	55	2	2	2	3	42	15	20
c	11	8	45	0	52	49	2	1	6	5	10
g	7	16	3	0	0	4	0	54	4	11	9
t	18	14	8	3	4	3	54	0	6	27	19
//
; Sites	58
>site_0
TTCACCTGTAA
>site_1
AGCACCCGAAT
>site_2
TGCATCTGACA
>site_3
TGCACCTGCTT
>site_4
CAGACCTGAAC
>site_5
TGCACCTGTGT
>site_6
TTCACCTGCGA
>site_7
AGTACCTGATA
>site_8
CACACCTGTTC
>site_9
CACACCTGCTT
>site_10
TTCACCTGGAA
>site_11
AGTACCTGAGC
>site_12
TACACGTGATA
>site_13
AACACCTGCAG
>site_14
GCCACCAGAGG
>site_15
GACACCTGGAT
>site_16
TGCACTTGATA
>site_17
CACATCTGAAG
>site_18
ATCTCCTGAAT
>site_19
GGCACGTGACT
>site_20
ACCACCTGCCC
>site_21
AGCACTTGATT
>site_22
TGCACCTGTAT
>site_23
ATTACCTGAGA
>site_24
AACACCCGAAT
>site_25
GCCACCTGTTC
>site_26
ATAACCTGAGG
>site_27
ACCACGTGATA
>site_28
CACTCCTGATA
>site_29
CTCACATGATG
>site_30
ATCACATGATT
>site_31
TGTACCTGATG
>site_32
CTCACCTAATA
>site_33
TGTACCTGAAT
>site_34
AACACCTAATA
>site_35
AACACCTGCTG
>site_36
ATCACCTAAAT
>site_37
AGCACCTGATG
>site_38
TAAACCTGATA
>site_39
TACACCTCATC
>site_40
ATCACCTGATT
>site_41
TACACGTGATC
>site_42
ATCACCTGGAA
>site_43
ACCACCTGGGA
>site_44
GCCAACTGATT
>site_45
CGCACCTGTCT
>site_46
GATACCTGATA
>site_47
TACATCTGATC
>site_48
CACAACTGATA
>site_49
TATACCTGAAT
>site_50
TATACCTGAGT
>site_51
CAGACCTGATA
>site_52
ACCATCTGAAT
>site_53
TGGACCTGAGG
>site_54
AGCACCTGAGC
>site_55
GTCTCCTGAGA
>site_56
CTCACTTGATC
>site_57
ACCACCAGACA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.012409_2025-05-16.012409_IdvjkC/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-05-16.012426
; Job done	2025-05-16.012427
; Seconds	0.14
;	user	0.14
;	system	0.03
;	cuser	1.25
;	csystem	0.22
