One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174057_2025-05-16.174057_O2IjFa/results/discovered_motifs/oligos_6nt_mkv1_m1/peak-motifs_oligos_6nt_mkv1_m1.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174057_2025-05-16.174057_O2IjFa/results/discovered_motifs/oligos_6nt_mkv1_m1/peak-motifs_oligos_6nt_mkv1_m1_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv1_m1_shift2 ; 24 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv1_m1_shift2 (oligos_6nt_mkv1_m1)
; oligos_6nt_mkv1_m1; m=0 (reference); ncol1=11; shift=2; ncol=13; --CmCCGCGCCgs ; Alignment reference a 0 0 1 4 0 0 3 0 0 0 0 3 0 c 0 0 9 5 12 11 1 13 1 13 12 3 4 g 0 0 3 3 0 1 9 0 12 0 0 5 8 t 0 0 0 1 1 1 0 0 0 0 1 2 1

MA1516.2_shift2 (KLF3)
; oligos_6nt_mkv1_m1 versus MA1516.2 (KLF3); m=1/23; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.73491; --grCCrCGCCC- ; cor=; Ncor= a 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 c 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 g 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 t 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0

MA2328.1_shift3 (ZBED4)
; oligos_6nt_mkv1_m1 versus MA2328.1 (ZBED4); m=2/23; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.650244; ---CcCGCyCCGC ; cor=; Ncor= a 0 0 0 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 22.0 19.0 c 0 0 0 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 19.0 589.0 g 0 0 0 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 580.0 35.0 t 0 0 0 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0 39.0 17.0

MA0742.2_rc_shift4 (KLF12_rc)
; oligos_6nt_mkv1_m1 versus MA0742.2_rc (KLF12_rc); m=3/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.647245; ----CCCCGCCCC ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948

MA0079.5_rc_shift2 (SP1_rc)
; oligos_6nt_mkv1_m1 versus MA0079.5_rc (SP1_rc); m=4/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.635638; --CyCCKCCCC-- ; cor=; Ncor= a 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 0 c 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 0 g 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 0 t 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0 0

MA0746.3_shift3 (SP3)
; oligos_6nt_mkv1_m1 versus MA0746.3 (SP3); m=5/23; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.630163; ---rCCACGCCCm ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0

MA1511.2_rc_shift4 (KLF10_rc)
; oligos_6nt_mkv1_m1 versus MA1511.2_rc (KLF10_rc); m=6/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.622995; ----CCMCGCCCC ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427

MA1961.2_rc_shift3 (PATZ1_rc)
; oligos_6nt_mkv1_m1 versus MA1961.2_rc (PATZ1_rc); m=7/23; ncol2=11; w=0; offset=1; strand=R; shift=3; score=0.622493; ---sCCCCkCCCC ; cor=; Ncor= a 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 c 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 g 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 t 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0

MA0685.2_rc_shift2 (SP4_rc)
; oligos_6nt_mkv1_m1 versus MA0685.2_rc (SP4_rc); m=8/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.61701; --CyCCKCCCc-- ; cor=; Ncor= a 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 0 c 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 0 g 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 0 t 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0 0

MA0516.3_rc_shift2 (SP2_rc)
; oligos_6nt_mkv1_m1 versus MA0516.3_rc (SP2_rc); m=9/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.612826; --cCCCGCCCC-- ; cor=; Ncor= a 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 0 c 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 0 g 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 0 t 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0 0

MA0740.2_rc_shift4 (KLF14_rc)
; oligos_6nt_mkv1_m1 versus MA0740.2_rc (KLF14_rc); m=10/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.606231; ----CCMCGCCCm ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158

MA1515.2_shift4 (KLF2)
; oligos_6nt_mkv1_m1 versus MA1515.2 (KLF2); m=11/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.60007; ----CCmCrCCC- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0

MA0741.1_shift3 (KLF16)
; oligos_6nt_mkv1_m1 versus MA0741.1 (KLF16); m=12/23; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.593659; ---gmCMCgCCCM ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0

MA1517.2_shift4 (KLF6)
; oligos_6nt_mkv1_m1 versus MA1517.2 (KLF6); m=13/23; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.587296; ----cCACRCCCm ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0

MA1959.2_rc_shift4 (KLF7_rc)
; oligos_6nt_mkv1_m1 versus MA1959.2_rc (KLF7_rc); m=14/23; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.577503; ----CcMCGCCC- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0

MA1564.2_shift4 (SP9)
; oligos_6nt_mkv1_m1 versus MA1564.2 (SP9); m=15/23; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.574388; ----cCmCGCCCm ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0

MA0493.3_rc_shift4 (KLF1_rc)
; oligos_6nt_mkv1_m1 versus MA0493.3_rc (KLF1_rc); m=16/23; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.566292; ----CCmCrCCC- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0

MA1513.2_shift4 (KLF15)
; oligos_6nt_mkv1_m1 versus MA1513.2 (KLF15); m=17/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.552397; ----cCCCGCCC- ; cor=; Ncor= a 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 c 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 g 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 t 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0

MA1713.2_shift1 (ZNF610)
; oligos_6nt_mkv1_m1 versus MA1713.2 (ZNF610); m=18/23; ncol2=10; w=-1; offset=-1; strand=D; shift=1; score=0.55099; -scGCCGCTCC-- ; cor=; Ncor= a 0 176.0 354.0 68.0 37.0 18.0 18.0 4.0 18.0 6.0 123.0 0 0 c 0 1222.0 1347.0 121.0 2245.0 2312.0 45.0 2357.0 34.0 2315.0 1976.0 0 0 g 0 738.0 392.0 2118.0 84.0 41.0 2312.0 21.0 45.0 62.0 186.0 0 0 t 0 250.0 293.0 79.0 20.0 15.0 11.0 4.0 2289.0 3.0 101.0 0 0

MA1512.2_shift4 (KLF11)
; oligos_6nt_mkv1_m1 versus MA1512.2 (KLF11); m=19/23; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.547314; ----cCACGCCCm ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0

MA1650.2_shift4 (ZBTB14)
; oligos_6nt_mkv1_m1 versus MA1650.2 (ZBTB14); m=20/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.519051; ----CCGCGCAC- ; cor=; Ncor= a 0 0 0 0 335.0 41.0 93.0 68.0 132.0 56.0 4500.0 99.0 0 c 0 0 0 0 3525.0 4292.0 294.0 4078.0 305.0 4178.0 37.0 3674.0 0 g 0 0 0 0 614.0 155.0 4098.0 319.0 4043.0 261.0 10.0 651.0 0 t 0 0 0 0 73.0 59.0 62.0 82.0 67.0 52.0 0.0 123.0 0

MA0747.2_shift4 (SP8)
; oligos_6nt_mkv1_m1 versus MA0747.2 (SP8); m=21/23; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.494519; ----mCACgCCCm ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0

MA0162.5_shift0 (EGR1)
; oligos_6nt_mkv1_m1 versus MA0162.5 (EGR1); m=22/23; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.457777; mCGCCCACgC--- ; cor=; Ncor= a 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 0 0 c 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 0 0 g 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 0 0 t 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0 0 0

MA1727.2_shift5 (ZNF417)
; oligos_6nt_mkv1_m1 versus MA1727.2 (ZNF417); m=23/23; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.453595; -----GGCGCCA- ; cor=; Ncor= a 0 0 0 0 0 1.0 1.0 7.0 1.0 1.0 31.0 984.0 0 c 0 0 0 0 0 1.0 1.0 936.0 1.0 990.0 954.0 13.0 0 g 0 0 0 0 0 996.0 996.0 1.0 996.0 1.0 1.0 1.0 0 t 0 0 0 0 0 1.0 1.0 55.0 1.0 7.0 13.0 1.0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv1_m1_shift2 (oligos_6nt_mkv1_m1)				; oligos_6nt_mkv1_m1; m=0 (reference); ncol1=11; shift=2; ncol=13; --CmCCGCGCCgs ; Alignment reference a 0 0 1 4 0 0 3 0 0 0 0 3 0 c 0 0 9 5 12 11 1 13 1 13 12 3 4 g 0 0 3 3 0 1 9 0 12 0 0 5 8 t 0 0 0 1 1 1 0 0 0 0 1 2 1
MA1516.2_shift2 (KLF3)				; oligos_6nt_mkv1_m1 versus MA1516.2 (KLF3); m=1/23; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.73491; --grCCrCGCCC- ; cor=; Ncor= a 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 c 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 g 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 t 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0
MA2328.1_shift3 (ZBED4)				; oligos_6nt_mkv1_m1 versus MA2328.1 (ZBED4); m=2/23; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.650244; ---CcCGCyCCGC ; cor=; Ncor= a 0 0 0 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 22.0 19.0 c 0 0 0 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 19.0 589.0 g 0 0 0 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 580.0 35.0 t 0 0 0 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0 39.0 17.0
MA0742.2_rc_shift4 (KLF12_rc)				; oligos_6nt_mkv1_m1 versus MA0742.2_rc (KLF12_rc); m=3/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.647245; ----CCCCGCCCC ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948
MA0079.5_rc_shift2 (SP1_rc)				; oligos_6nt_mkv1_m1 versus MA0079.5_rc (SP1_rc); m=4/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.635638; --CyCCKCCCC-- ; cor=; Ncor= a 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 0 c 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 0 g 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 0 t 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0 0
MA0746.3_shift3 (SP3)				; oligos_6nt_mkv1_m1 versus MA0746.3 (SP3); m=5/23; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.630163; ---rCCACGCCCm ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0
MA1511.2_rc_shift4 (KLF10_rc)				; oligos_6nt_mkv1_m1 versus MA1511.2_rc (KLF10_rc); m=6/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.622995; ----CCMCGCCCC ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427
MA1961.2_rc_shift3 (PATZ1_rc)				; oligos_6nt_mkv1_m1 versus MA1961.2_rc (PATZ1_rc); m=7/23; ncol2=11; w=0; offset=1; strand=R; shift=3; score=0.622493; ---sCCCCkCCCC ; cor=; Ncor= a 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 c 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 g 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 t 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0
MA0685.2_rc_shift2 (SP4_rc)				; oligos_6nt_mkv1_m1 versus MA0685.2_rc (SP4_rc); m=8/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.61701; --CyCCKCCCc-- ; cor=; Ncor= a 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 0 c 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 0 g 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 0 t 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0 0
MA0516.3_rc_shift2 (SP2_rc)				; oligos_6nt_mkv1_m1 versus MA0516.3_rc (SP2_rc); m=9/23; ncol2=9; w=0; offset=0; strand=R; shift=2; score=0.612826; --cCCCGCCCC-- ; cor=; Ncor= a 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 0 c 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 0 g 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 0 t 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0 0
MA0740.2_rc_shift4 (KLF14_rc)				; oligos_6nt_mkv1_m1 versus MA0740.2_rc (KLF14_rc); m=10/23; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.606231; ----CCMCGCCCm ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158
MA1515.2_shift4 (KLF2)				; oligos_6nt_mkv1_m1 versus MA1515.2 (KLF2); m=11/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.60007; ----CCmCrCCC- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0
MA0741.1_shift3 (KLF16)				; oligos_6nt_mkv1_m1 versus MA0741.1 (KLF16); m=12/23; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.593659; ---gmCMCgCCCM ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0
MA1517.2_shift4 (KLF6)				; oligos_6nt_mkv1_m1 versus MA1517.2 (KLF6); m=13/23; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.587296; ----cCACRCCCm ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0
MA1959.2_rc_shift4 (KLF7_rc)				; oligos_6nt_mkv1_m1 versus MA1959.2_rc (KLF7_rc); m=14/23; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.577503; ----CcMCGCCC- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0
MA1564.2_shift4 (SP9)				; oligos_6nt_mkv1_m1 versus MA1564.2 (SP9); m=15/23; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.574388; ----cCmCGCCCm ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0
MA0493.3_rc_shift4 (KLF1_rc)				; oligos_6nt_mkv1_m1 versus MA0493.3_rc (KLF1_rc); m=16/23; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.566292; ----CCmCrCCC- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0
MA1513.2_shift4 (KLF15)				; oligos_6nt_mkv1_m1 versus MA1513.2 (KLF15); m=17/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.552397; ----cCCCGCCC- ; cor=; Ncor= a 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 c 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 g 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 t 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0
MA1713.2_shift1 (ZNF610)				; oligos_6nt_mkv1_m1 versus MA1713.2 (ZNF610); m=18/23; ncol2=10; w=-1; offset=-1; strand=D; shift=1; score=0.55099; -scGCCGCTCC-- ; cor=; Ncor= a 0 176.0 354.0 68.0 37.0 18.0 18.0 4.0 18.0 6.0 123.0 0 0 c 0 1222.0 1347.0 121.0 2245.0 2312.0 45.0 2357.0 34.0 2315.0 1976.0 0 0 g 0 738.0 392.0 2118.0 84.0 41.0 2312.0 21.0 45.0 62.0 186.0 0 0 t 0 250.0 293.0 79.0 20.0 15.0 11.0 4.0 2289.0 3.0 101.0 0 0
MA1512.2_shift4 (KLF11)				; oligos_6nt_mkv1_m1 versus MA1512.2 (KLF11); m=19/23; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.547314; ----cCACGCCCm ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0
MA1650.2_shift4 (ZBTB14)				; oligos_6nt_mkv1_m1 versus MA1650.2 (ZBTB14); m=20/23; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.519051; ----CCGCGCAC- ; cor=; Ncor= a 0 0 0 0 335.0 41.0 93.0 68.0 132.0 56.0 4500.0 99.0 0 c 0 0 0 0 3525.0 4292.0 294.0 4078.0 305.0 4178.0 37.0 3674.0 0 g 0 0 0 0 614.0 155.0 4098.0 319.0 4043.0 261.0 10.0 651.0 0 t 0 0 0 0 73.0 59.0 62.0 82.0 67.0 52.0 0.0 123.0 0
MA0747.2_shift4 (SP8)				; oligos_6nt_mkv1_m1 versus MA0747.2 (SP8); m=21/23; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.494519; ----mCACgCCCm ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0
MA0162.5_shift0 (EGR1)				; oligos_6nt_mkv1_m1 versus MA0162.5 (EGR1); m=22/23; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.457777; mCGCCCACgC--- ; cor=; Ncor= a 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 0 0 c 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 0 0 g 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 0 0 t 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0 0 0
MA1727.2_shift5 (ZNF417)				; oligos_6nt_mkv1_m1 versus MA1727.2 (ZNF417); m=23/23; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.453595; -----GGCGCCA- ; cor=; Ncor= a 0 0 0 0 0 1.0 1.0 7.0 1.0 1.0 31.0 984.0 0 c 0 0 0 0 0 1.0 1.0 936.0 1.0 990.0 954.0 13.0 0 g 0 0 0 0 0 996.0 996.0 1.0 996.0 1.0 1.0 1.0 0 t 0 0 0 0 0 1.0 1.0 55.0 1.0 7.0 13.0 1.0 0