One-to-n alignments

Command: compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174057_2025-05-16.174057_O2IjFa/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174057_2025-05-16.174057_O2IjFa/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv1_m2_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv1_m2_shift0 (oligos_7nt_mkv1_m2)
; oligos_7nt_mkv1_m2; m=0 (reference); ncol1=11; shift=0; ncol=11; sdGTAATCAkr ; Alignment reference a 2 3 1 2 10 9 0 0 10 1 4 c 3 0 0 1 0 0 1 10 0 2 0 g 4 3 9 0 0 0 0 0 0 3 4 t 1 4 0 7 0 1 9 0 0 4 2

oligos_7nt_mkv1_m2_shift0 (oligos_7nt_mkv1_m2)
; oligos_7nt_mkv1_m2 versus oligos_7nt_mkv1_m2; m=1/1; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; sdGTAATCAkr ; cor=; Ncor= a 2 3 1 2 10 9 0 0 10 1 4 c 3 0 0 1 0 0 1 10 0 2 0 g 4 3 9 0 0 0 0 0 0 3 4 t 1 4 0 7 0 1 9 0 0 4 2

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv1_m3_shift1 ; 5 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)
; oligos_7nt_mkv1_m3; m=0 (reference); ncol1=11; shift=1; ncol=12; -msCACGCCGsC ; Alignment reference a 0 3 1 0 8 0 0 0 0 1 0 0 c 0 5 5 10 0 10 0 9 9 1 6 7 g 0 2 4 0 2 0 10 0 0 7 4 1 t 0 0 0 0 0 0 0 1 1 1 0 2

oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)
; oligos_7nt_mkv1_m3 versus oligos_7nt_mkv1_m3; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=1; score= 1; -msCACGCCGsC ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 0 c 0 5 5 10 0 10 0 9 9 1 6 7 g 0 2 4 0 2 0 10 0 0 7 4 1 t 0 0 0 0 0 0 0 1 1 1 0 2

oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)
; oligos_7nt_mkv1_m3 versus oligos_6nt_mkv1_m3; m=2/4; ncol2=10; w=0; offset=0; strand=D; shift=1; score=0.894328; -ssCACGCCgs- ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 0 c 0 4 4 8 0 9 0 8 9 2 5 0 g 0 3 3 1 1 0 9 0 0 5 4 0 t 0 0 0 0 0 0 0 1 0 1 0 0

oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)
; oligos_7nt_mkv1_m3 versus oligos_6nt_mkv1_m1; m=3/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.714952; CmCCGCGCCgs- ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 0 c 9 5 12 11 1 13 1 13 12 3 4 0 g 3 3 0 1 9 0 12 0 0 5 8 0 t 0 1 1 1 0 0 0 0 1 2 1 0

oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)
; oligos_7nt_mkv1_m3 versus oligos_7nt_mkv1_m1; m=4/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.714952; CmCCGCGCCgs- ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 0 c 9 5 12 11 1 13 1 13 12 3 4 0 g 3 3 0 1 9 0 12 0 0 5 8 0 t 0 1 1 1 0 0 0 0 1 2 1 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv1_m1_shift0 ; 5 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)
; oligos_7nt_mkv1_m1; m=0 (reference); ncol1=11; shift=0; ncol=11; CmCCGCGCCgs ; Alignment reference a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)
; oligos_7nt_mkv1_m1 versus oligos_7nt_mkv1_m1; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)
; oligos_7nt_mkv1_m1 versus oligos_6nt_mkv1_m1; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)
; oligos_7nt_mkv1_m1 versus oligos_6nt_mkv1_m3; m=3/4; ncol2=10; w=0; offset=1; strand=D; shift=1; score=0.766447; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0

oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)
; oligos_7nt_mkv1_m1 versus oligos_7nt_mkv1_m3; m=4/4; ncol2=11; w=0; offset=1; strand=D; shift=1; score=0.714952; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv1_m3_shift1 ; 5 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)
; oligos_6nt_mkv1_m3; m=0 (reference); ncol1=10; shift=1; ncol=11; -ssCACGCCgs ; Alignment reference a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0

oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)
; oligos_6nt_mkv1_m3 versus oligos_6nt_mkv1_m3; m=1/4; ncol2=10; w=0; offset=0; strand=D; shift=1; score= 1; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0

oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)
; oligos_6nt_mkv1_m3 versus oligos_7nt_mkv1_m3; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.894328; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0

oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)
; oligos_6nt_mkv1_m3 versus oligos_6nt_mkv1_m1; m=3/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.766447; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)
; oligos_6nt_mkv1_m3 versus oligos_7nt_mkv1_m1; m=4/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.766447; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv1_m1_shift0 ; 5 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)
; oligos_6nt_mkv1_m1; m=0 (reference); ncol1=11; shift=0; ncol=11; CmCCGCGCCgs ; Alignment reference a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)
; oligos_6nt_mkv1_m1 versus oligos_6nt_mkv1_m1; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)
; oligos_6nt_mkv1_m1 versus oligos_7nt_mkv1_m1; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)
; oligos_6nt_mkv1_m1 versus oligos_6nt_mkv1_m3; m=3/4; ncol2=10; w=0; offset=1; strand=D; shift=1; score=0.766447; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0

oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)
; oligos_6nt_mkv1_m1 versus oligos_7nt_mkv1_m3; m=4/4; ncol2=11; w=0; offset=1; strand=D; shift=1; score=0.714952; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv1_m2_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv1_m2_shift0 (oligos_6nt_mkv1_m2)
; oligos_6nt_mkv1_m2; m=0 (reference); ncol1=10; shift=0; ncol=10; mrAAAAATkw ; Alignment reference a 4 4 11 11 11 11 11 0 2 6 c 4 2 0 0 0 0 0 0 2 0 g 2 4 0 0 0 0 0 0 4 2 t 1 1 0 0 0 0 0 11 3 3

oligos_6nt_mkv1_m2_shift0 (oligos_6nt_mkv1_m2)
; oligos_6nt_mkv1_m2 versus oligos_6nt_mkv1_m2; m=1/1; ncol2=10; w=0; offset=0; strand=D; shift=0; score= 1; mrAAAAATkw ; cor=; Ncor= a 4 4 11 11 11 11 11 0 2 6 c 4 2 0 0 0 0 0 0 2 0 g 2 4 0 0 0 0 0 0 4 2 t 1 1 0 0 0 0 0 11 3 3

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)				; oligos_7nt_mkv1_m3; m=0 (reference); ncol1=11; shift=1; ncol=12; -msCACGCCGsC ; Alignment reference a 0 3 1 0 8 0 0 0 0 1 0 0 c 0 5 5 10 0 10 0 9 9 1 6 7 g 0 2 4 0 2 0 10 0 0 7 4 1 t 0 0 0 0 0 0 0 1 1 1 0 2
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)				; oligos_7nt_mkv1_m3 versus oligos_7nt_mkv1_m3; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=1; score= 1; -msCACGCCGsC ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 0 c 0 5 5 10 0 10 0 9 9 1 6 7 g 0 2 4 0 2 0 10 0 0 7 4 1 t 0 0 0 0 0 0 0 1 1 1 0 2
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)				; oligos_7nt_mkv1_m3 versus oligos_6nt_mkv1_m3; m=2/4; ncol2=10; w=0; offset=0; strand=D; shift=1; score=0.894328; -ssCACGCCgs- ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 0 c 0 4 4 8 0 9 0 8 9 2 5 0 g 0 3 3 1 1 0 9 0 0 5 4 0 t 0 0 0 0 0 0 0 1 0 1 0 0
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)				; oligos_7nt_mkv1_m3 versus oligos_6nt_mkv1_m1; m=3/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.714952; CmCCGCGCCgs- ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 0 c 9 5 12 11 1 13 1 13 12 3 4 0 g 3 3 0 1 9 0 12 0 0 5 8 0 t 0 1 1 1 0 0 0 0 1 2 1 0
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)				; oligos_7nt_mkv1_m3 versus oligos_7nt_mkv1_m1; m=4/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.714952; CmCCGCGCCgs- ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 0 c 9 5 12 11 1 13 1 13 12 3 4 0 g 3 3 0 1 9 0 12 0 0 5 8 0 t 0 1 1 1 0 0 0 0 1 2 1 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)				; oligos_7nt_mkv1_m1; m=0 (reference); ncol1=11; shift=0; ncol=11; CmCCGCGCCgs ; Alignment reference a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)				; oligos_7nt_mkv1_m1 versus oligos_7nt_mkv1_m1; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)				; oligos_7nt_mkv1_m1 versus oligos_6nt_mkv1_m1; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)				; oligos_7nt_mkv1_m1 versus oligos_6nt_mkv1_m3; m=3/4; ncol2=10; w=0; offset=1; strand=D; shift=1; score=0.766447; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)				; oligos_7nt_mkv1_m1 versus oligos_7nt_mkv1_m3; m=4/4; ncol2=11; w=0; offset=1; strand=D; shift=1; score=0.714952; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)				; oligos_6nt_mkv1_m3; m=0 (reference); ncol1=10; shift=1; ncol=11; -ssCACGCCgs ; Alignment reference a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)				; oligos_6nt_mkv1_m3 versus oligos_6nt_mkv1_m3; m=1/4; ncol2=10; w=0; offset=0; strand=D; shift=1; score= 1; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)				; oligos_6nt_mkv1_m3 versus oligos_7nt_mkv1_m3; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.894328; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)				; oligos_6nt_mkv1_m3 versus oligos_6nt_mkv1_m1; m=3/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.766447; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)				; oligos_6nt_mkv1_m3 versus oligos_7nt_mkv1_m1; m=4/4; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.766447; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)				; oligos_6nt_mkv1_m1; m=0 (reference); ncol1=11; shift=0; ncol=11; CmCCGCGCCgs ; Alignment reference a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_6nt_mkv1_m1_shift0 (oligos_6nt_mkv1_m1)				; oligos_6nt_mkv1_m1 versus oligos_6nt_mkv1_m1; m=1/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_7nt_mkv1_m1_shift0 (oligos_7nt_mkv1_m1)				; oligos_6nt_mkv1_m1 versus oligos_7nt_mkv1_m1; m=2/4; ncol2=11; w=0; offset=0; strand=D; shift=0; score= 1; CmCCGCGCCgs ; cor=; Ncor= a 1 4 0 0 3 0 0 0 0 3 0 c 9 5 12 11 1 13 1 13 12 3 4 g 3 3 0 1 9 0 12 0 0 5 8 t 0 1 1 1 0 0 0 0 1 2 1
oligos_6nt_mkv1_m3_shift1 (oligos_6nt_mkv1_m3)				; oligos_6nt_mkv1_m1 versus oligos_6nt_mkv1_m3; m=3/4; ncol2=10; w=0; offset=1; strand=D; shift=1; score=0.766447; -ssCACGCCgs ; cor=; Ncor= a 0 2 2 0 8 0 0 0 0 1 0 c 0 4 4 8 0 9 0 8 9 2 5 g 0 3 3 1 1 0 9 0 0 5 4 t 0 0 0 0 0 0 0 1 0 1 0
oligos_7nt_mkv1_m3_shift1 (oligos_7nt_mkv1_m3)				; oligos_6nt_mkv1_m1 versus oligos_7nt_mkv1_m3; m=4/4; ncol2=11; w=0; offset=1; strand=D; shift=1; score=0.714952; -msCACGCCGs ; cor=; Ncor= a 0 3 1 0 8 0 0 0 0 1 0 c 0 5 5 10 0 10 0 9 9 1 6 g 0 2 4 0 2 0 10 0 0 7 4 t 0 0 0 0 0 0 0 1 1 1 0