; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	9	12	5	2	0	0	34	2	3	7	6
c	11	4	31	35	2	33	3	0	31	14	9
g	8	12	0	0	3	1	0	35	1	7	8
t	9	9	1	0	32	3	0	0	2	9	14
//
; Sites	37
>site_0
ATCCCCAGCGA
>site_1
ACCCTCAGTGA
>site_2
TGCCTCAGCCT
>site_3
CAACTCAGCAT
>site_4
AGCCGCAACGC
>site_5
AACCTGAGCGT
>site_6
TGCATCAGCAT
>site_7
ATCATCAGCAG
>site_8
TGCCTCAGCTG
>site_9
CTACTCAGCTT
>site_10
TGCCTCAGCCT
>site_11
GGCCTCCGCCA
>site_12
CTCCTCAGATC
>site_13
GACCTCAGTCC
>site_14
GTACTCAGCTG
>site_15
AACCTCCGCCT
>site_16
GAACTCAGCGC
>site_17
CCCCTCAGCCC
>site_18
CTCCGCAGCCC
>site_19
CCCCTCAGGTT
>site_20
CCCCTCAGCCA
>site_21
TGCCTCAGCTG
>site_22
GATCTCAGCAT
>site_23
AGCCTTAGCTT
>site_24
CTACTCAGCAT
>site_25
GGCCTTAGCAA
>site_26
CACCTCAGCCT
>site_27
TGCCTCAGCCT
>site_28
ATCCTCAGAAG
>site_29
TACCTCAGAGG
>site_30
TGCCTCAGCCC
>site_31
CACCCCAGCGG
>site_32
AACCTCCGCTG
>site_33
GACCTCAGCCA
>site_34
CACCTTAGCCC
>site_35
GGCCGCAGCCC
>site_36
TTCCTCAACTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	12	13	8	42	3	43	0	1	2	11	13
c	11	15	33	1	2	0	2	1	2	7	7
g	12	12	4	2	41	0	0	43	41	12	13
t	12	7	2	2	1	4	45	2	2	17	14
//
; Sites	47
>site_0
GGCAGATGGAT
>site_1
CCAAGATGGGG
>site_2
AACAGATTGCC
>site_3
GGCAGATGCTA
>site_4
TACAGATGGAG
>site_5
ACCAAATGGTC
>site_6
CCCAGATGATT
>site_7
CGCATATGGGC
>site_8
CACAGATGGGG
>site_9
ATCTGATGGCT
>site_10
CACAGATAGAT
>site_11
GAAAGATGGGA
>site_12
GGGAGATGGCT
>site_13
TAAAGATGGGT
>site_14
CCCAGTTGGTG
>site_15
GGCAGTTGGCG
>site_16
CAAAGATGGAG
>site_17
TCAAGATGGAA
>site_18
TCCAGATGGTG
>site_19
AACAGATGGAC
>site_20
CCAAGATGGTG
>site_21
GACGGATGCGT
>site_22
GACGGATCGAA
>site_23
TCCAGACGGTC
>site_24
GACAGATGGGA
>site_25
GGCAGATGGTT
>site_26
CACAGTTGGTG
>site_27
ACAAGATGGTG
>site_28
CCGAGACGGGT
>site_29
TAGAGATGGGA
>site_30
ACCAGATTGTT
>site_31
TTCAGTTGGGT
>site_32
TTCAAATGGAT
>site_33
GGCAGATGGGA
>site_34
AGAAGATGGAA
>site_35
ACCAGATGTTA
>site_36
GTCAAATGGAA
>site_37
ACCCGATGGGA
>site_38
AGCAGATGATC
>site_39
ACTAGATGGTG
>site_40
TTTAGATGGTG
>site_41
TGCAGATGTAT
>site_42
CTCTGATGGTA
>site_43
TTGAGATGGCC
>site_44
GCCACATGGCG
>site_45
TGCACATGGTT
>site_46
AGCAGATGGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
; Host name	rsat
; Job started	2025-05-16.174427
; Job done	2025-05-16.174428
; Seconds	0.12
;	user	0.12
;	system	0.02
;	cuser	0.46
;	csystem	0.09
