; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174416_2025-05-16.174416_Ix0OVW/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	7	4	0	0	1	25	1	0	0	11	8
c	5	9	26	2	0	2	0	0	26	8	3
g	11	10	1	2	27	1	25	28	0	2	10
t	5	5	1	24	0	0	2	0	2	7	7
//
; Sites	28
>site_0
GGCTGAGGCAG
>site_1
CACCGAGGCTG
>site_2
TTCTGCGGCTC
>site_3
TCCTGAGGCTG
>site_4
AGCTGAGGCAT
>site_5
GGCTGAGGCAT
>site_6
GGCGGAGGCCA
>site_7
TCCCGAGGCAC
>site_8
ACCTGAGGCCA
>site_9
GACGGATGCGT
>site_10
GCCTGATGCAT
>site_11
GACTGAGGTCG
>site_12
GACTGAGGCCG
>site_13
TTCTGAGGCCT
>site_14
GTGTGAGGCGA
>site_15
AGCTGAGGCAG
>site_16
CTCTGAGGCAA
>site_17
AGCTAAGGCTC
>site_18
TCCTGAGGCCT
>site_19
CCCTGAAGCTA
>site_20
GGCTGAGGCAA
>site_21
CTCTGAGGTAG
>site_22
GGCTGAGGCAA
>site_23
AGCTGGGGCCG
>site_24
CCCTGAGGCAG
>site_25
GGCTGCGGCCA
>site_26
ACCTGAGGCTG
>site_27
ACTTGAGGCTT
; Host name	rsat
; Job started	2025-05-16.174430
; Job done	2025-05-16.174430
; Seconds	0.11
;	user	0.11
;	system	0.01
;	cuser	0
;	csystem	0
