/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title Exc_L5_or_6_NP_control_MDD_up -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	16
	Sum of sequence lengths      	13818
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	863
	Possible positions           	13802
 Sequences:
	#	length	ID
	1	1000	chr11:3021993-3023082
	2	1000	chr1:5479037-5480839
	3	1000	chr20:29444717-29445908
	4	946	chr13:59057804-59058749
	5	392	chr12:98801504-98801895
	6	951	chr5:160492038-160492988
	7	437	chr10:74185104-74185540
	8	1000	chr3:36594293-36596002
	9	1000	chr7:48867717-48869305
	10	1000	chr21:42209654-42210718
	11	320	chr20:50707457-50707776
	12	1000	chr4:154741837-154742911
	13	1000	chr8:125543544-125544998
	14	772	chr11:72541206-72541977
	15	1000	chr17:27938549-27940482
	16	1000	chr2:4599230-4600631
 Oligonucleotide statistics:
	Total occurrences    	13719
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	13802
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	10	200
	2	-24	[-479,-460]	-469.5	12	230
	3	-23	[-459,-440]	-449.5	12	240
	4	-22	[-439,-420]	-429.5	12	240
	5	-21	[-419,-400]	-409.5	12	240
	6	-20	[-399,-380]	-389.5	13	246
	7	-19	[-379,-360]	-369.5	13	260
	8	-18	[-359,-340]	-349.5	13	260
	9	-17	[-339,-320]	-329.5	13	260
	10	-16	[-319,-300]	-309.5	13	260
	11	-15	[-299,-280]	-289.5	13	260
	12	-14	[-279,-260]	-269.5	13	260
	13	-13	[-259,-240]	-249.5	13	260
	14	-12	[-239,-220]	-229.5	13	260
	15	-11	[-219,-200]	-209.5	14	279
	16	-10	[-199,-180]	-189.5	15	296
	17	-9	[-179,-160]	-169.5	15	300
	18	-8	[-159,-140]	-149.5	16	320
	19	-7	[-139,-120]	-129.5	16	320
	20	-6	[-119,-100]	-109.5	16	320
	21	-5	[-99,-80]	-89.5	16	320
	22	-4	[-79,-60]	-69.5	16	320
	23	-3	[-59,-40]	-49.5	16	320
	24	-2	[-39,-20]	-29.5	16	320
	25	-1	[-19,0]	-9.5	16	320
	26	0	[1,20]	10.5	16	320
	27	1	[21,40]	30.5	16	320
	28	2	[41,60]	50.5	16	320
	29	3	[61,80]	70.5	16	320
	30	4	[81,100]	90.5	16	320
	31	5	[101,120]	110.5	16	320
	32	6	[121,140]	130.5	16	320
	33	7	[141,160]	150.5	16	319
	34	8	[161,180]	170.5	15	300
	35	9	[181,200]	190.5	15	295
	36	10	[201,220]	210.5	14	277
	37	11	[221,240]	230.5	13	260
	38	12	[241,260]	250.5	13	260
	39	13	[261,280]	270.5	13	260
	40	14	[281,300]	290.5	13	260
	41	15	[301,320]	310.5	13	260
	42	16	[321,340]	330.5	13	260
	43	17	[341,360]	350.5	13	260
	44	18	[361,380]	370.5	13	260
	45	19	[381,400]	390.5	13	245
	46	20	[401,420]	410.5	12	240
	47	21	[421,440]	430.5	12	240
	48	22	[441,460]	450.5	12	240
	49	23	[461,480]	470.5	12	225
	50	24	[481,500]	490.5	10	190

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
tt tt 1142 101.6 49 1.5e-05 0.00024 3.61 1 18 20 17 12 23 19 17 20 15 12 23 26 15 15 21 21 29 15 22 24 23 27 25 28 25 23 22 33 31 30 26 43 13 21 28 51 21 30 13 20 26 27 21 21 13 22 22 23 29 21
aa aa 1119 84.2 49 1.3e-03 0.021 1.68 2 13 31 20 23 12 13 24 21 24 28 17 13 22 20 24 19 15 24 25 26 19 35 23 45 24 21 31 40 34 28 30 23 26 24 26 16 19 12 23 23 23 23 12 20 26 20 14 13 9 23
gg gg 851 79.4 49 3.9e-03 0.062 1.20 3 17 9 19 11 18 8 14 13 9 15 21 16 14 16 21 22 11 24 21 36 19 9 21 18 20 12 21 24 20 18 13 25 23 18 15 19 18 16 9 22 11 14 13 12 24 23 18 24 12 5
cc cc 852 75.4 49 9.0e-03 0.14 0.84 4 9 10 16 17 15 15 14 25 16 22 11 15 20 24 17 16 20 36 23 29 9 22 16 22 15 17 17 19 15 12 18 15 23 17 21 15 21 21 6 19 18 12 17 20 17 4 15 13 19 7
gt gt 692 54.3 49 2.8e-01 4.5 -0.65 5 12 12 13 10 19 14 11 12 17 15 11 18 19 9 11 12 16 16 17 11 20 12 18 11 18 7 18 13 14 25 16 17 26 15 9 17 15 16 12 9 12 12 8 7 6 14 12 11 17 10
ac ac 692 51.3 49 3.8e-01 6.2 -0.79 6 9 15 10 17 7 14 14 12 15 20 17 6 14 14 11 20 11 9 21 17 15 21 19 18 20 26 14 10 14 15 17 17 15 17 14 9 9 8 14 15 8 9 14 17 16 10 9 15 7 7
ag ag 962 50.5 49 4.1e-01 6.6 -0.82 7 16 19 20 19 18 19 24 17 19 25 19 21 18 28 18 14 25 13 20 19 29 21 23 14 27 20 29 23 23 23 17 17 26 23 13 18 20 21 24 22 18 16 15 16 20 14 13 7 9 10
ct ct 1041 45.6 49 6.1e-01 9.8 -0.99 8 16 11 17 15 16 21 16 23 24 15 19 21 24 20 18 36 25 22 24 25 21 24 27 25 20 24 20 17 22 21 26 15 21 32 23 16 23 13 20 17 19 18 24 28 16 20 26 24 19 12
tc tc 873 43.6 49 6.9e-01 11 -1.04 9 14 17 13 12 19 11 15 12 24 14 11 22 18 11 19 25 26 19 17 17 20 24 16 23 15 15 16 17 22 17 23 16 20 22 18 11 24 18 15 17 18 12 16 20 13 17 23 18 18 13
ta ta 715 43.5 49 6.9e-01 11 -1.05 10 9 15 17 16 9 12 16 14 20 14 21 19 11 12 15 13 19 15 15 12 19 12 18 20 17 14 21 20 12 13 21 15 20 15 18 9 9 17 16 11 10 15 18 9 8 9 10 8 7 10
ga ga 843 39.1 49 8.4e-01 13 -1.13 11 12 11 18 15 15 17 15 18 11 18 17 16 12 18 18 15 17 14 21 24 24 20 24 14 30 22 22 18 23 23 19 17 20 21 18 17 11 13 22 20 15 10 16 14 20 14 10 11 5 8
gc gc 702 39.0 49 8.5e-01 14 -1.13 12 10 7 9 13 10 19 14 17 9 9 11 11 14 20 15 15 18 23 16 13 20 14 19 9 13 23 18 14 19 14 12 14 13 13 16 17 12 13 16 11 11 19 18 15 13 13 13 8 10 9
at at 931 38.5 49 8.6e-01 14 -1.14 13 11 17 18 19 16 14 21 15 18 12 21 19 13 12 24 17 21 28 19 20 22 22 18 26 20 30 20 26 21 20 26 28 18 17 28 14 14 21 22 14 17 15 22 14 13 17 15 12 8 16
tg tg 1077 38.0 49 8.7e-01 14 -1.14 14 16 10 15 18 22 27 17 23 14 16 18 19 27 17 18 26 20 31 28 27 26 22 29 18 28 28 20 21 23 35 27 28 28 25 20 30 18 18 21 14 19 17 19 19 16 23 21 20 18 17
ca ca 1026 32.5 49 9.7e-01 15 -1.19 15 16 23 17 19 17 20 25 16 21 21 20 16 18 23 21 21 21 26 24 16 26 32 18 24 22 34 24 20 21 22 25 27 22 15 22 15 23 19 24 22 14 16 17 25 21 16 17 13 14 15
cg cg 201 0.0 49 1.0e+00 16 -1.20 16 2 3 1 4 4 3 3 2 4 4 3 2 1 1 8 4 6 5 7 4 8 3 6 5 6 4 7 5 6 4 4 3 5 5 6 3 3 4 3 4 4 5 6 3 3 4 2 2 4 3 
 Host name	rsat
 Job started	2025-05-16.174603
 Job done	2025-05-16.174603
 Seconds	0.18
	user	0.18
	system	0.01
	cuser	0.01
;	csystem	0