; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	17	8	5	1	0	40	1	0	44	19	8
c	13	8	40	40	41	2	1	41	0	8	12
g	8	7	0	1	0	1	41	2	0	8	17
t	7	22	0	3	4	2	2	2	1	10	8
//
; Sites	45
>site_0
TCCCCAGCAAC
>site_1
ATACCAGCACA
>site_2
GCCCCAGCATC
>site_3
ACCCCCGCAAC
>site_4
CACCTAGCAAT
>site_5
AGCCCAGGACG
>site_6
TGCCCAGCAGA
>site_7
GCCCCACCAAC
>site_8
CTCGCAGCATC
>site_9
ATCCTAGCAGG
>site_10
ACCCCAGGAAC
>site_11
CACCCTGCAAC
>site_12
CTCCCAGCATG
>site_13
CTCCCAGCATA
>site_14
ATCCCAGCATG
>site_15
CTCCCAGCAAA
>site_16
ATCCCAGTATT
>site_17
CTCCCAGCAAG
>site_18
GTCCCAGCATG
>site_19
CTCCCAGCAAG
>site_20
ATCCTAGCATG
>site_21
CTCCCAGCAAG
>site_22
AGACCAGCAAG
>site_23
TACCCTGCAAA
>site_24
CACCCAGCAGG
>site_25
AGCTCAGCAAG
>site_26
ATCCCAGCACT
>site_27
TTCCTAGCAGC
>site_28
AGCCCAGCATG
>site_29
CTCCCCGCAGA
>site_30
ACCACAGCAAG
>site_31
TTACCAGCAAA
>site_32
GTCTCAGCAAT
>site_33
AACCCATCACT
>site_34
ATACCAGCACT
>site_35
GGCCCAGCACT
>site_36
AACCCAGCAGG
>site_37
GCCCCAGCTAC
>site_38
CTCCCAACACG
>site_39
GTCCCAGCAAA
>site_40
AACTCAGCACC
>site_41
CACCCGGCAGC
>site_42
TCACCAGCATC
>site_43
TTCCCAGTAGT
>site_44
GGCCCATCAAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	9	17	31	30	29	0	32	34	30	14	10
c	14	3	0	1	2	34	2	0	4	3	13
g	7	5	0	1	1	0	0	0	0	3	2
t	4	9	3	2	2	0	0	0	0	14	9
//
; Sites	34
>site_0
CTAAGCAAATC
>site_1
CTAAACAAAAT
>site_2
GAAAACAAATT
>site_3
AAAAACAAATT
>site_4
CAAGACAAATA
>site_5
GGTAACAAATC
>site_6
GTAAACCAAGA
>site_7
CCAAACAACTC
>site_8
CTACACAAATA
>site_9
GTAATCAAAGG
>site_10
ACAAACAAAAC
>site_11
AAAAACAAAAA
>site_12
CGTAACAAAGA
>site_13
TTAAACAAACT
>site_14
CATAACAAATA
>site_15
GAAAACAAAAG
>site_16
TTAAACAACTT
>site_17
GTAATCAAAAT
>site_18
TGATACAAATT
>site_19
GGAAACAAATT
>site_20
AGAAACAAATC
>site_21
TAATACAAATA
>site_22
AAAAACAAAAC
>site_23
AAAAACAAAAA
>site_24
CAAAACAAAAC
>site_25
AAAAACAAACC
>site_26
ACAAACCAAAC
>site_27
CAAACCAAACC
>site_28
CAAACCAAAAC
>site_29
CAAAACAAAAC
>site_30
CAAAACAAAAC
>site_31
CTAAACAACAA
>site_32
CAAAACAAAAT
>site_33
AAAAACAACTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	11	4	26	1	2	2	25	26	4	9	8
c	7	8	1	1	22	24	0	1	0	5	6
g	3	4	0	25	1	0	1	0	0	5	3
t	6	11	0	0	2	1	1	0	23	8	10
//
; Sites	27
>site_0
ACAGCCAATAT
>site_1
ACAGTCAATTC
>site_2
AGAACCAATAA
>site_3
TTAGCCGAACG
>site_4
TTAGCCAATAA
>site_5
GTAGCCTATGT
>site_6
TAAGCAAATCA
>site_7
ACAGACAATAA
>site_8
TTAGCCAATTT
>site_9
AGAGACAATAC
>site_10
CTAGCCAAAAT
>site_11
CTAGCCACTTT
>site_12
GCAGCCAATTT
>site_13
TTAGCCAATGG
>site_14
AAAGCCAATCC
>site_15
ACAGCCAATCC
>site_16
TCAGCCAATGT
>site_17
AAAGGCAATTA
>site_18
ACAGCAAATAC
>site_19
AGCGCCAATAC
>site_20
CTACCCAATTA
>site_21
CCAGTCAATGA
>site_22
CTAGCTAATAT
>site_23
CTAGCCAAATT
>site_24
GAAGCCAATGT
>site_25
AGAGCCAATCA
>site_26
CTAGCCAAATG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.174600_2025-05-16.174600_au3zWU/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-05-16.174613
; Job done	2025-05-16.174614
; Seconds	0.11
;	user	0.12
;	system	0.03
;	cuser	0.75
;	csystem	0.11
