/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab
 Program version       	1.118
 Quick mode 
 Input files
	file2 	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
	file1 	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	match_table_txt	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab
	match_table_html	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.html
	html_index   	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_index.html
	prefix       	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant
	alignments_1ton	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.tab
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.html
 Matrices
	file1	10 matrices	$RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	13	113
		file1	2	11	68
		file1	3	13	91
		file1	4	10	48
		file1	5	10	50
		file1	6	14	98
		file1	7	15	67
		file1	8	12	66
		file1	9	13	50
		file1	10	11	73
	file2	879 matrices	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
		file2		1		6		20
		file2		2		14		43
		file2		3		10		25
		file2		4		15		10
		file2		5		10		17
		file2		6		10		18
		file2		7		17		25
		file2		8		15		33
		file2		9		14		16
		file2		10		6		16
		file2		11		15		1369
		...	869 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_6nt_mkv2_m5 MA1516.2 oligos_6nt_mkv2_m5 KLF3 0.715 0.715 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv2_m5 MA1513.2 oligos_6nt_mkv2_m5 KLF15 0.891 0.713 10 8 8 10 0.8000 0.8000 1.0000 D 2
oligos_6nt_mkv2_m2 MA0090.4 oligos_6nt_mkv2_m2 TEAD1 0.853 0.698 11 9 9 11 0.8182 0.8182 1.0000 D 1
oligos_6nt_mkv2_m5 MA1959.2 oligos_6nt_mkv2_m5 KLF7 0.860 0.688 10 8 8 10 0.8000 0.8000 1.0000 R 2
oligos_6nt_mkv2_m5 MA0493.3 oligos_6nt_mkv2_m5 KLF1 0.840 0.672 10 8 8 10 0.8000 0.8000 1.0000 R 2
oligos_6nt_mkv2_m5 MA0599.1 oligos_6nt_mkv2_m5 KLF5 0.813 0.665 10 10 9 11 0.8182 0.9000 0.9000 D 1
oligos_6nt_mkv2_m5 MA0865.3 oligos_6nt_mkv2_m5 E2F8 0.737 0.663 10 9 9 10 0.9000 0.9000 1.0000 D 1
oligos_6nt_mkv2_m5 MA0742.2 oligos_6nt_mkv2_m5 KLF12 0.907 0.660 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m5 MA1961.2 oligos_6nt_mkv2_m5 PATZ1 0.874 0.655 10 11 9 12 0.7500 0.9000 0.8182 R 1
oligos_6nt_mkv2_m2 MA0809.3 oligos_6nt_mkv2_m2 TEAD4 0.899 0.654 11 8 8 11 0.7273 0.7273 1.0000 D 1
oligos_6nt_mkv2_m5 MA0516.3 oligos_6nt_mkv2_m5 SP2 0.896 0.652 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m5 MA1511.2 oligos_6nt_mkv2_m5 KLF10 0.876 0.637 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m5 MA0685.2 oligos_6nt_mkv2_m5 SP4 0.867 0.631 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m5 MA0740.2 oligos_6nt_mkv2_m5 KLF14 0.864 0.628 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m5 MA0079.5 oligos_6nt_mkv2_m5 SP1 0.859 0.625 10 9 8 11 0.7273 0.8000 0.8889 R 2
oligos_6nt_mkv2_m2 MA0808.1 oligos_6nt_mkv2_m2 TEAD3 0.855 0.622 11 8 8 11 0.7273 0.7273 1.0000 D 1
oligos_6nt_mkv2_m5 MA1515.2 oligos_6nt_mkv2_m5 KLF2 0.771 0.616 10 8 8 10 0.8000 0.8000 1.0000 D 2
oligos_6nt_mkv2_m5 MA1122.2 oligos_6nt_mkv2_m5 TFDP1 0.751 0.600 10 8 8 10 0.8000 0.8000 1.0000 R 1
oligos_6nt_mkv2_m5 MA0039.5 oligos_6nt_mkv2_m5 KLF4 0.750 0.600 10 8 8 10 0.8000 0.8000 1.0000 D 2
oligos_6nt_mkv2_m5 MA1522.2 oligos_6nt_mkv2_m5 MAZ 0.747 0.598 10 8 8 10 0.8000 0.8000 1.0000 D 2
oligos_6nt_mkv2_m5 MA0471.3 oligos_6nt_mkv2_m5 E2F6 0.737 0.590 10 8 8 10 0.8000 0.8000 1.0000 R 1
oligos_6nt_mkv2_m5 MA2328.1 oligos_6nt_mkv2_m5 ZBED4 0.871 0.581 10 10 8 12 0.6667 0.8000 0.8000 D -2
oligos_6nt_mkv2_m4 MA1979.2 oligos_6nt_mkv2_m4 ZNF416 0.706 0.578 10 10 9 11 0.8182 0.9000 0.9000 D -1
oligos_6nt_mkv2_m5 MA0746.3 oligos_6nt_mkv2_m5 SP3 0.770 0.577 10 11 9 12 0.7500 0.9000 0.8182 D 1
oligos_7nt_mkv2_m5 MA1979.2 oligos_7nt_mkv2_m5 ZNF416 0.763 0.572 11 10 9 12 0.7500 0.8182 0.9000 D -1
oligos_6nt_mkv2_m2 MA1121.2 oligos_6nt_mkv2_m2 TEAD2 0.887 0.564 11 7 7 11 0.6364 0.6364 1.0000 D 1
oligos_6nt_mkv2_m2 MA0152.3 oligos_6nt_mkv2_m2 Nfatc2 0.773 0.562 11 8 8 11 0.7273 0.7273 1.0000 R 3
oligos_6nt_mkv2_m5 MA0741.1 oligos_6nt_mkv2_m5 KLF16 0.728 0.546 10 11 9 12 0.7500 0.9000 0.8182 D 1
oligos_6nt_mkv2_m5 MA0736.1 oligos_6nt_mkv2_m5 GLIS2 0.756 0.540 10 14 10 14 0.7143 1.0000 0.7143 D -2
oligos_7nt_mkv2_m5 MA0161.3 oligos_7nt_mkv2_m5 NFIC 0.819 0.521 11 7 7 11 0.6364 0.6364 1.0000 D 2
oligos_6nt_mkv2_m5 MA1564.2 oligos_6nt_mkv2_m5 SP9 0.779 0.519 10 10 8 12 0.6667 0.8000 0.8000 D 2
oligos_6nt_mkv2_m4 MA1153.2 oligos_6nt_mkv2_m4 Smad4 0.735 0.515 10 7 7 10 0.7000 0.7000 1.0000 R 2
oligos_6nt_mkv2_m4 MA0161.3 oligos_6nt_mkv2_m4 NFIC 0.732 0.513 10 7 7 10 0.7000 0.7000 1.0000 D 2
oligos_6nt_mkv2_m5 MA1630.3 oligos_6nt_mkv2_m5 ZNF281 0.767 0.511 10 10 8 12 0.6667 0.8000 0.8000 R 2
oligos_6nt_mkv2_m5 MA1653.2 oligos_6nt_mkv2_m5 ZNF148 0.766 0.510 10 10 8 12 0.6667 0.8000 0.8000 D 2
oligos_6nt_mkv2_m1 MA1645.2 oligos_6nt_mkv2_m1 NKX2-2 0.829 0.510 13 8 8 13 0.6154 0.6154 1.0000 D 3
oligos_6nt_mkv2_m5 MA0751.2 oligos_6nt_mkv2_m5 ZIC4 0.710 0.507 10 14 10 14 0.7143 1.0000 0.7143 D -2
oligos_6nt_mkv2_m5 MA1578.2 oligos_6nt_mkv2_m5 VEZF1 0.832 0.499 10 6 6 10 0.6000 0.6000 1.0000 D 0
oligos_7nt_mkv2_m3 MA0108.3 oligos_7nt_mkv2_m3 TBP 0.850 0.496 12 7 7 12 0.5833 0.5833 1.0000 D 4
oligos_6nt_mkv2_m5 MA1584.2 oligos_6nt_mkv2_m5 ZIC5 0.730 0.487 10 15 10 15 0.6667 1.0000 0.6667 D -2
oligos_6nt_mkv2_m3 MA0108.3 oligos_6nt_mkv2_m3 TBP 0.903 0.486 13 7 7 13 0.5385 0.5385 1.0000 D 6
oligos_6nt_mkv2_m1 MA2003.2 oligos_6nt_mkv2_m1 NKX2-4 0.787 0.484 13 8 8 13 0.6154 0.6154 1.0000 D 3
oligos_6nt_mkv2_m5 MA0753.3 oligos_6nt_mkv2_m5 ZNF740 0.715 0.477 10 10 8 12 0.6667 0.8000 0.8000 D 2
oligos_7nt_mkv2_m1 MA1645.2 oligos_7nt_mkv2_m1 NKX2-2 0.830 0.474 14 8 8 14 0.5714 0.5714 1.0000 D 3
oligos_6nt_mkv2_m5 MA1512.2 oligos_6nt_mkv2_m5 KLF11 0.705 0.470 10 10 8 12 0.6667 0.8000 0.8000 D 2
oligos_7nt_mkv2_m4 MA0108.3 oligos_7nt_mkv2_m4 TBP 0.871 0.469 13 7 7 13 0.5385 0.5385 1.0000 D 1
oligos_6nt_mkv2_m3 MA1974.2 oligos_6nt_mkv2_m3 ZNF211 0.722 0.464 13 10 9 14 0.6429 0.6923 0.9000 D 4
oligos_7nt_mkv2_m4 MA0602.2 oligos_7nt_mkv2_m4 Arid5a 0.747 0.460 13 8 8 13 0.6154 0.6154 1.0000 D 5
oligos_7nt_mkv2_m2 MA0152.3 oligos_7nt_mkv2_m2 Nfatc2 0.862 0.460 15 8 8 15 0.5333 0.5333 1.0000 D 6
oligos_6nt_mkv2_m2 MA2333.1 oligos_6nt_mkv2_m2 ZNF35 0.721 0.459 11 7 7 11 0.6364 0.6364 1.0000 D 2
oligos_6nt_mkv2_m4 MA1724.2 oligos_6nt_mkv2_m4 Rfx6 0.783 0.457 10 9 7 12 0.5833 0.7000 0.7778 R -2
oligos_6nt_mkv2_m5 MA1615.2 oligos_6nt_mkv2_m5 Plagl1 0.713 0.454 10 8 7 11 0.6364 0.7000 0.8750 R -1
oligos_6nt_mkv2_m1 MA0673.2 oligos_6nt_mkv2_m1 NKX2-8 0.736 0.453 13 8 8 13 0.6154 0.6154 1.0000 D 3
oligos_7nt_mkv2_m5 MA1153.2 oligos_7nt_mkv2_m5 Smad4 0.711 0.452 11 7 7 11 0.6364 0.6364 1.0000 R 2
oligos_6nt_mkv2_m1 MA0809.3 oligos_6nt_mkv2_m1 TEAD4 0.734 0.452 13 8 8 13 0.6154 0.6154 1.0000 D 3
oligos_7nt_mkv2_m2 MA0090.4 oligos_7nt_mkv2_m2 TEAD1 0.749 0.450 15 9 9 15 0.6000 0.6000 1.0000 R 2
oligos_7nt_mkv2_m1 MA2003.2 oligos_7nt_mkv2_m1 NKX2-4 0.785 0.449 14 8 8 14 0.5714 0.5714 1.0000 D 3
oligos_6nt_mkv2_m5 MA0748.3 oligos_6nt_mkv2_m5 YY2 0.822 0.448 10 7 6 11 0.5455 0.6000 0.8571 R 4
oligos_7nt_mkv2_m2 MA0809.3 oligos_7nt_mkv2_m2 TEAD4 0.827 0.441 15 8 8 15 0.5333 0.5333 1.0000 R 3
oligos_6nt_mkv2_m5 MA0747.2 oligos_6nt_mkv2_m5 SP8 0.708 0.436 10 11 8 13 0.6154 0.8000 0.7273 D 2
oligos_6nt_mkv2_m5 MA1117.2 oligos_6nt_mkv2_m5 RELB 0.798 0.435 10 7 6 11 0.5455 0.6000 0.8571 D -1
oligos_7nt_mkv2_m5 MA1724.2 oligos_7nt_mkv2_m5 Rfx6 0.807 0.434 11 9 7 13 0.5385 0.6364 0.7778 R -2
oligos_6nt_mkv2_m1 MA0130.1 oligos_6nt_mkv2_m1 ZNF354C 0.940 0.434 13 6 6 13 0.4615 0.4615 1.0000 D 1
oligos_6nt_mkv2_m1 MA0479.2 oligos_6nt_mkv2_m1 FOXH1 0.705 0.434 13 8 8 13 0.6154 0.6154 1.0000 D 0
oligos_6nt_mkv2_m2 MA0625.3 oligos_6nt_mkv2_m2 NFATC3 0.789 0.431 11 6 6 11 0.5455 0.5455 1.0000 R 3
oligos_7nt_mkv2_m5 MA0670.2 oligos_7nt_mkv2_m5 NFIA 0.787 0.429 11 6 6 11 0.5455 0.5455 1.0000 R 3
oligos_7nt_mkv2_m5 MA1730.2 oligos_7nt_mkv2_m5 ZNF708 0.788 0.424 11 9 7 13 0.5385 0.6364 0.7778 R 4
oligos_6nt_mkv2_m1 MA0063.3 oligos_6nt_mkv2_m1 NKX2-5 0.787 0.424 13 7 7 13 0.5385 0.5385 1.0000 D 4
oligos_7nt_mkv2_m2 MA0808.1 oligos_7nt_mkv2_m2 TEAD3 0.791 0.422 15 8 8 15 0.5333 0.5333 1.0000 R 3
oligos_6nt_mkv2_m2 MA0624.3 oligos_6nt_mkv2_m2 Nfatc1 0.773 0.422 11 6 6 11 0.5455 0.5455 1.0000 R 3
oligos_7nt_mkv2_m1 MA0673.2 oligos_7nt_mkv2_m1 NKX2-8 0.730 0.417 14 8 8 14 0.5714 0.5714 1.0000 D 3
oligos_7nt_mkv2_m1 MA0479.2 oligos_7nt_mkv2_m1 FOXH1 0.727 0.415 14 8 8 14 0.5714 0.5714 1.0000 D 5
oligos_6nt_mkv2_m5 MA1650.2 oligos_6nt_mkv2_m5 ZBTB14 0.830 0.415 10 8 6 12 0.5000 0.6000 0.7500 D 4
oligos_6nt_mkv2_m5 MA1548.2 oligos_6nt_mkv2_m5 PLAGL2 0.824 0.412 10 8 6 12 0.5000 0.6000 0.7500 D -2
oligos_7nt_mkv2_m3 MA1974.2 oligos_7nt_mkv2_m3 ZNF211 0.720 0.411 12 10 8 14 0.5714 0.6667 0.8000 R -2
oligos_7nt_mkv2_m1 MA0809.3 oligos_7nt_mkv2_m1 TEAD4 0.719 0.411 14 8 8 14 0.5714 0.5714 1.0000 D 3
oligos_6nt_mkv2_m2 MA1589.2 oligos_6nt_mkv2_m2 ZNF140 0.706 0.409 11 19 11 19 0.5789 1.0000 0.5789 R -5
oligos_7nt_mkv2_m5 MA0738.2 oligos_7nt_mkv2_m5 HIC2 0.745 0.406 11 6 6 11 0.5455 0.5455 1.0000 R 4
oligos_6nt_mkv2_m2 MA1624.2 oligos_6nt_mkv2_m2 Stat5a 0.745 0.401 11 9 7 13 0.5385 0.6364 0.7778 D 4
oligos_7nt_mkv2_m1 MA0130.1 oligos_7nt_mkv2_m1 ZNF354C 0.934 0.400 14 6 6 14 0.4286 0.4286 1.0000 D 1 
 Host name	rsat
 Job started	2025-05-16.175329
 Job done	2025-05-16.175406
 Seconds	6.26
	user	6.26
	system	2.09
	cuser	26.44
;	csystem	2.84