; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	76	15	5	7	2	110	6	5	3	1	105	15	9
c	9	51	9	90	98	1	86	5	103	107	2	56	19
g	12	11	5	10	9	1	3	2	2	2	3	18	11
t	16	36	94	6	4	1	18	101	5	3	3	24	74
//
; Sites	113
>site_0
TGTCGACCCCAGG
>site_1
GGTCGACACCACT
>site_2
TCCCCACGCCATC
>site_3
CTTCCACTCCGCG
>site_4
GGTTCACGCCATT
>site_5
ATTACGCTCCAAT
>site_6
TACTCACTCCATG
>site_7
TCTCCACTCCCTG
>site_8
CCGTCACTCCAGT
>site_9
CATCCTCTCCAAG
>site_10
AATCCCCTCCACG
>site_11
TCTGCACTCCAAG
>site_12
CCTGCACTCCAGC
>site_13
AGTAGACTCCATC
>site_14
TCTCCACACCAAA
>site_15
CCCCTACTCCAAT
>site_16
TGACCACTACATG
>site_17
ACACCAGTCCAAG
>site_18
ATTGCACTCCAGC
>site_19
GTTCCACTTCAGC
>site_20
ACTCCATTCCAGA
>site_21
ACGCAACTCCACA
>site_22
TTTCGATTCCATT
>site_23
TTTCGAATCCATT
>site_24
TTTCCATTCCATT
>site_25
ACTCCACTTCACT
>site_26
ACTCCACTCCACT
>site_27
ACTCCACTCCACT
>site_28
ATTCCACTCCACT
>site_29
AATCCACCCCAGT
>site_30
GTTCCAATCCACC
>site_31
ACTCCACTCCCCG
>site_32
ACTTCACTCCACT
>site_33
AATCCACTTCACT
>site_34
ACTCCAATCCACT
>site_35
ATTCCACTCCAAT
>site_36
GCTCCATTCCACT
>site_37
ACTCCAGTCCATT
>site_38
ACTCCACTCCAGT
>site_39
ATTCCACTCCACT
>site_40
AATCCATTCCACT
>site_41
ACTCCAATCCATT
>site_42
AATCCACTCCAAT
>site_43
ACTCCAATCCACT
>site_44
GATGCACTCCAAT
>site_45
ACTCCACTCCGAT
>site_46
ACAGCACTCCACT
>site_47
AGTCCACTCCACA
>site_48
ACCCCACTCTAGT
>site_49
ACTCCACCCCACT
>site_50
ACTCCACTCCACC
>site_51
AATGCACTCCACT
>site_52
ATTCCACTCCAAT
>site_53
GTTCCATTCCACT
>site_54
ATTCCACCCCACT
>site_55
ATTCCATTCCACC
>site_56
ATTCCATTCCATT
>site_57
ATTCCATTCCATT
>site_58
CTTCGATTCCATT
>site_59
ATTCGATTCCATT
>site_60
ATTCCACTTCACC
>site_61
CCTCCATTCCACT
>site_62
ATTCCATTCCACC
>site_63
ACTCCACACCATT
>site_64
ACTCCACTCCACA
>site_65
ACTCCACTCCACT
>site_66
TGGGCACTCCACT
>site_67
ATTCCACTCCTGG
>site_68
TTCCCATTCCACT
>site_69
ACTCCACTCCGTT
>site_70
ACTCCACTCCACT
>site_71
ATTCCACTCCACT
>site_72
ACTCCACTCCATT
>site_73
ACTCTACTCCACT
>site_74
ACTCCACTCTACT
>site_75
ACTCCACTCCACT
>site_76
ACTCTACTCCACT
>site_77
ATTCCACTCTACT
>site_78
AACCCATTCCACT
>site_79
ATTACACTCCAAC
>site_80
ACTCCACTCCTGT
>site_81
ACCGCACTCCACT
>site_82
ACTCCAGTCCACC
>site_83
ACTCCACTCCAGT
>site_84
ACTCCACTCCACT
>site_85
ACTCAACTCCACT
>site_86
ACTCCACTCAACT
>site_87
AATCCACTCCACT
>site_88
AATCCAATCCACT
>site_89
ATTCCATTCCACT
>site_90
ATTCCATTCGATT
>site_91
GTTTGACTCCATT
>site_92
ACTCCACTTCACC
>site_93
ACTCCACTCCACT
>site_94
ATTACACTCCACT
>site_95
ATTCCACCCCATT
>site_96
ACTCCACTCCATT
>site_97
AATACACTCCACT
>site_98
AGTAGACTCCAAT
>site_99
ATTCCACTCCAGT
>site_100
GTTCCATTCCACT
>site_101
TGTCCACACCATC
>site_102
TGCACACTCCACC
>site_103
GCGCCACTGCAGT
>site_104
GGTTCACTGCAAC
>site_105
ACACCACACCAAA
>site_106
CATCCACTCCTCA
>site_107
ATTGCACTCCAGC
>site_108
CCACCACTACATA
>site_109
TCTCTACTCGAGA
>site_110
GACCCACTCCAGC
>site_111
TTGCCACTACACT
>site_112
ATTGCACTCCAGC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	9	15	15	66	1	1	1	0	66	14	10
c	13	34	29	0	0	0	66	58	0	17	11
g	8	7	14	2	0	0	0	7	2	10	7
t	38	12	10	0	67	67	1	3	0	27	40
//
; Sites	68
>site_0
TCCGTTCCAAT
>site_1
CCGATTTCATC
>site_2
CGAATTCTAGG
>site_3
GGGATTCGAAG
>site_4
AGTATTCCAGA
>site_5
TTTATTCCAAC
>site_6
TGTATTCCAAT
>site_7
GCGATTCCAGA
>site_8
AACATTCCACT
>site_9
GAAATTCGATA
>site_10
CGCATTCCAGC
>site_11
TATATTCCAAT
>site_12
CAGATTCCAGT
>site_13
TATATTCCAGT
>site_14
ATTATTCCAAA
>site_15
AATATTCCAGT
>site_16
CACATTCCACG
>site_17
TGAATTCCAAG
>site_18
GTAATTCTAAC
>site_19
GCAATTCCAAT
>site_20
TATATTCCAAT
>site_21
TCCATTCCAGA
>site_22
GCGATTCCATT
>site_23
ATCATTCCATG
>site_24
TCAATTCGATT
>site_25
TCGATTCCATT
>site_26
TCGAATCCATT
>site_27
TCCATTCCATT
>site_28
AACATTCCACT
>site_29
TCCATTCCACT
>site_30
TCCATTCCACT
>site_31
TCCATTCCACT
>site_32
TCCATTCCACC
>site_33
TCCATTCCATT
>site_34
TCCATTCCATT
>site_35
TTGATTCCATT
>site_36
TTGATTCCAGC
>site_37
TCCATTCGATT
>site_38
TCGATTCCATT
>site_39
TCGATTCCATT
>site_40
GCAATTCGATT
>site_41
TCCATTCCACT
>site_42
TCCATTCCACC
>site_43
TCAATTCCATT
>site_44
CCCATTCCACT
>site_45
TCAATTCCATT
>site_46
CCCATTCCACT
>site_47
CCCATTCCACT
>site_48
TCCATTCCACT
>site_49
TCAATTCCATT
>site_50
TCCATTCGATT
>site_51
TTAATTCCATT
>site_52
TTGATTCGATT
>site_53
TTGATTCCATT
>site_54
TTCATTCCACC
>site_55
TCCATTCCACT
>site_56
TGCATTCCGTT
>site_57
AAAATTCCAAG
>site_58
AACATTCCATG
>site_59
TATATTACATA
>site_60
TACATACCATA
>site_61
CTCGTTCCAAC
>site_62
GACATTCTAAC
>site_63
CCGATTCCGGT
>site_64
CTAATTCCACA
>site_65
CCAATTCCATC
>site_66
CCAATTCCACA
>site_67
AATATTCCAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	52	39	58	74	3	86	10	83	5	84	42	31	49
c	7	9	6	3	1	0	5	3	2	1	7	10	7
g	8	5	4	2	1	3	0	4	0	1	3	13	6
t	24	38	23	12	86	2	76	1	84	5	39	37	29
//
; Sites	91
>site_0
AAAATAAATAAAT
>site_1
TAAATAAATAAAT
>site_2
TAAATAAATAAAA
>site_3
AAAATAAATACTG
>site_4
TAAATATATACAG
>site_5
ATAATTTATATTG
>site_6
TCAATATAAATTA
>site_7
AGCTTATATAACT
>site_8
AAGTTATATAAGC
>site_9
ACTATATTTAATA
>site_10
CAAAAATATAAGA
>site_11
TTAATATGTACAC
>site_12
CTAATATAAAATA
>site_13
TTAATATGTAAGA
>site_14
TAACTACATAAAG
>site_15
ACAATAAATAATA
>site_16
TAGATATATAGTT
>site_17
TAACTATATATCT
>site_18
TGAATAAATAACC
>site_19
TAACTACATAAAT
>site_20
TACATGTATAACT
>site_21
CAAATATAAATGA
>site_22
CCAATACATACGA
>site_23
GAATTATCTAACT
>site_24
GCAATATCTAGGC
>site_25
TCAATTTATATAT
>site_26
CAAATATATAAAT
>site_27
AAAATATGTATCT
>site_28
AAATTATATATAT
>site_29
TATATATATAATT
>site_30
ATTATATATATAT
>site_31
TATATATATATAA
>site_32
TATATATATATAA
>site_33
ATTATATATATAT
>site_34
TATATATATAATA
>site_35
ATATTATATATAT
>site_36
GATATATATTATA
>site_37
ATAATATATATCA
>site_38
ATGATATATATTA
>site_39
AATATATATCATA
>site_40
AATATATATGATA
>site_41
ATCATATATATTA
>site_42
ATAATATATATGA
>site_43
CATATATATTATA
>site_44
ATAATGTATAATA
>site_45
ACATTATATAATA
>site_46
GTATTATATAATG
>site_47
ATAATACATATGT
>site_48
TACATATGTAATA
>site_49
ATAATATATTACA
>site_50
GTAATATATTATA
>site_51
ATATTATATATAA
>site_52
ATTATATATAATA
>site_53
ATTATATATAATA
>site_54
ATATTATATATAA
>site_55
ATAATATATATTA
>site_56
ATAATATATATTA
>site_57
ATGACATATAATA
>site_58
ATAGTATATATAA
>site_59
ATTATATATACTA
>site_60
AGTATATATAATA
>site_61
ATATTATATATAC
>site_62
TATATATATTATA
>site_63
ATAATATATATAA
>site_64
ATTATATATATTA
>site_65
AATATATATAATA
>site_66
ATATTATATATAT
>site_67
ATAATATACATTA
>site_68
ATAATGTATATTA
>site_69
TACATATATATAT
>site_70
AATATATATATGT
>site_71
CATATATATATTA
>site_72
ATAATATATATAT
>site_73
TCAGTATATATAA
>site_74
ATTATATATACTG
>site_75
AGTATATATAATA
>site_76
GTATTATATATAC
>site_77
ATAATACATACCA
>site_78
GTCATATATATTT
>site_79
AAAATATATATGA
>site_80
ATAAAATATATAT
>site_81
TAAATATAAAATA
>site_82
ATAATAAATATAA
>site_83
ACAATATACAGGT
>site_84
AAAAGATATATCT
>site_85
AAAATAAATAAAT
>site_86
TAAATAAATAAAT
>site_87
TAAATAAATAAAC
>site_88
AGTATATCTAAGT
>site_89
AAAATATAAAAGT
>site_90
GAAAAATATAAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	16	10	0	0	46	1	2	1	16	18
c	18	14	46	0	2	3	1	45	10	11
g	8	14	2	0	0	42	41	0	12	10
t	6	10	0	48	0	2	4	2	10	9
//
; Sites	48
>site_0
CACTAGGCCC
>site_1
CGCTAGGCCG
>site_2
CACTAGGCCT
>site_3
TGCTAGGCGC
>site_4
CCCTAGTCGG
>site_5
CCCTAGGCGG
>site_6
ATCTAGGCCC
>site_7
GACTAGGCTC
>site_8
GCCTAGTCGC
>site_9
TCCTAGGCAG
>site_10
GCCTACGCGG
>site_11
GCGTAGGCTA
>site_12
GACTACGCCT
>site_13
CTCTAGGCGA
>site_14
AGCTAGGCAT
>site_15
CCCTAGGCCA
>site_16
TACTAGGCAA
>site_17
AACTCGGCTA
>site_18
CGCTAGGTAT
>site_19
CCCTAGACGG
>site_20
CGCTACGCCA
>site_21
CCCTAGACGG
>site_22
CACTAGGCTT
>site_23
AGCTCGGCGA
>site_24
TTCTAGGCAC
>site_25
CGCTAGCCTA
>site_26
CGCTAGGCAA
>site_27
GACTATGCCG
>site_28
ACCTAGGCAG
>site_29
AGCTAGGTAC
>site_30
CCCTAGGCTC
>site_31
AGCTAGGCTC
>site_32
AACTAGGATC
>site_33
CGCTAGTCTT
>site_34
CTCTAGGCAA
>site_35
ACCTAGGCCA
>site_36
ATCTAGGCAG
>site_37
ATCTAGGCAT
>site_38
TCCTAGGCCA
>site_39
GTCTATGCGA
>site_40
TGCTAGGCAA
>site_41
ATCTAGGCAA
>site_42
GTCTAGTCAT
>site_43
ACGTAGGCGC
>site_44
CTCTAGGCAA
>site_45
AGCTAAGCTA
>site_46
AACTAGGCAA
>site_47
AGCTAGGCGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	13	8	1	0	1	0	1	2	7	9
c	15	9	48	47	49	50	0	45	23	19
g	15	19	1	3	0	0	49	0	13	12
t	7	14	0	0	0	0	0	3	7	10
//
; Sites	50
>site_0
GGCCCCGCAC
>site_1
GCCCCCGCGG
>site_2
GGCCCCGCGG
>site_3
CGCCACGCCG
>site_4
TCCCCCGCTT
>site_5
ACCCCCGCCG
>site_6
GCCCCCGCTC
>site_7
ATCCCCGCCC
>site_8
TCCCCCGCCC
>site_9
ACGCCCGCCG
>site_10
GCCCCCGCCT
>site_11
CGCCCCGCGA
>site_12
CGCGCCGCGA
>site_13
GACCCCGTAG
>site_14
ATCCCCGCGC
>site_15
AGCCCCGCGC
>site_16
GACCCCGCGC
>site_17
TTCCCCGCCA
>site_18
TGCCCCGCCA
>site_19
AGCCCCGCCC
>site_20
CGCCCCGCAC
>site_21
CGCCCCGCCG
>site_22
GTCCCCGTAC
>site_23
GGCCCCGCGT
>site_24
GGCCCCGCGT
>site_25
GTCCCCGCGG
>site_26
AGCCCCGCCC
>site_27
ACCCCCGCCA
>site_28
AACCCCGCCC
>site_29
CACGCCGCTA
>site_30
TCCCCCGACG
>site_31
CGCCCCGCAA
>site_32
GACCCCGCTG
>site_33
TGCCCCGTCG
>site_34
CTCCCCGCGC
>site_35
GTCCCCGCCC
>site_36
CGCCCCGCAC
>site_37
CTCCCCGCCT
>site_38
GGCCCCGCCC
>site_39
CGCCCCGCTT
>site_40
TTCCCCGCCT
>site_41
AACCCCGACG
>site_42
CGACCCGCAA
>site_43
ATCCCCGCCT
>site_44
CTCCCCGCCA
>site_45
GTCCCCGCCC
>site_46
CTCCCCGCGC
>site_47
ATCGCCGCTT
>site_48
CACCCCGCTC
>site_49
AACCCCACGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175219_2025-05-16.175219_UyZibC/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-05-16.175231
; Job done	2025-05-16.175233
; Seconds	0.13
;	user	0.13
;	system	0.06
;	cuser	1.24
;	csystem	0.2
