; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	0	2	29	0	3	3	1	1	0	28	0	1	1	0	30	0	0	1	2	28	0	5	1
c	1	0	1	0	1	1	1	1	2	1	1	0	0	3	30	0	1	0	1	1	0	4	2	1
g	27	1	27	0	1	26	24	28	0	28	0	1	28	0	0	0	0	30	0	27	2	3	23	26
t	0	29	0	1	28	0	2	0	27	1	1	29	1	26	0	0	29	0	28	0	0	23	0	2
//
; Sites	30
>site_0
GTGATGGGTGATGTCATGTGATGG
>site_1
GTGATGGGTGATGTCATGTGATGG
>site_2
GTGATGGGTGATGTCATGTGATGT
>site_3
GTGATGTGTGATGTCATGTGATGG
>site_4
GTGATGGGTGATGTCATGTGATGC
>site_5
GTGATGCATGATGTCATGTGATGG
>site_6
GTGATGGGTGATGTCATGTGATGG
>site_7
GTGATGGGTGATGCCATGTGATGG
>site_8
GTGATGGGTTATGTCATGTGATGG
>site_9
GTGATGGGTGATGCCATGTGACAG
>site_10
CTGTGATGAGTGGTCATGTGATGG
>site_11
GTGATGGGTGATGTCATGTGATGG
>site_12
GGGATGGGCGATGTCATGTGATGG
>site_13
GTAATGGGTGATGTCATGTGGGGG
>site_14
GTGATAGGTGATGTCATGTGATCG
>site_15
GTGATGGGTGATGTCATGTGATGG
>site_16
GTGATGGGTGATGTCATGTGATGG
>site_17
ATCATGGGTGATGTCATGTGACAG
>site_18
GTGATGGGTGATGTCATGTGATGG
>site_19
GTGATGGGTGATGCCATGTGACAT
>site_20
GTGATGAGTGATGTCATGTGATGG
>site_21
GTGATGGGTGATGTCATGTGATAG
>site_22
GTGATGAGTGATGTCATGTGACAG
>site_23
GTGATGGGTGCTGTCATGTAATGG
>site_24
ATGACCACCCATTACATGACAGCA
>site_25
GTGATGGGTGATGTCATGTGATGG
>site_26
GTGATGGGTGATATCATGTAATGG
>site_27
GTAATGGGTGATGTCATGCGGGGG
>site_28
GTGATAGGTGATGTCATGTGATGG
>site_29
GTGATGGGTGATGTCACGTGATGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	37	8	3	44	0	49	3	3	45	0	51	4	6	45	0	8	5	43	4	3	51	0	41	7
c	13	9	49	10	52	4	2	12	3	50	5	5	43	3	53	44	42	8	7	50	3	46	9	9
g	5	2	3	1	0	3	0	40	4	2	1	1	6	3	3	3	1	5	1	1	0	4	6	0
t	2	38	2	2	5	1	52	2	5	5	0	47	2	6	1	2	9	1	45	3	3	7	1	41
//
; Sites	57
>site_0
ATCACATGACATCACCCATCACAT
>site_1
ATCACATGACATCACCCATCACAT
>site_2
ATCACATGACATCACCCATCACAT
>site_3
ATCACATGACATCACACATCACAT
>site_4
ATCACATGACATCACCCATCACAT
>site_5
ATCACATGACATCATGCATCACAT
>site_6
ATCACATGACATCACCCATCACAT
>site_7
ATCACATGGCATCACCCATCACAT
>site_8
ATCACATGACATAACCCATCACAT
>site_9
GTCACATGGCATCACCCATCACAT
>site_10
ACCACCTGTCACATGGCATCACCC
>site_11
ATCACATGACCACTCATCACAGGA
>site_12
CACCCATCACATGACCACTCATCA
>site_13
ATCACATGACATCACCCATCACAT
>site_14
CGCCCATCCCATCACCCATCACAT
>site_15
ATGACATCGCCCATCCCATCACCC
>site_16
ATCACATGACATCGCCCATCCCAT
>site_17
ATCACATGACATCACCTGTCACAT
>site_18
CACCCATCACATGACCACCCATCA
>site_19
CCCATTACATATCACCCATCACAT
>site_20
CACCCATTACATATCACCCATCAC
>site_21
GACATCACCCATTACATATCACCC
>site_22
CCCACATGACATCACCCATTACAT
>site_23
ATCACATGACCACCCCCACATGAC
>site_24
ATCACATGACATCACCTATCACAT
>site_25
ATCACATGACATCACCCATCACAT
>site_26
ATCACATGACATCACCCATCACAT
>site_27
ATGATATGACATCACCCATCACAT
>site_28
GTCACATGACATCACCCATGATAT
>site_29
ATCACATGACATCACCCATCACAT
>site_30
GTCACATGGCATCACCCATCACAT
>site_31
ACCACATGTCACATGGCATCACCC
>site_32
ATCACATGACATCACCTGTCACAT
>site_33
ATCACATGACATCACTCATCACAT
>site_34
ATCACATGACATCACCCATCACAT
>site_35
GTCACATGACATCACTCATCACAT
>site_36
ATTACATGACAGCACCCATCACAT
>site_37
CACCCATTACATGACAGCACCCAT
>site_38
ACCACCCATTACATGACAGCACCC
>site_39
ATGACCACCCATTACATGACAGCA
>site_40
ATCACATGACCACCCATTACATGA
>site_41
CCATCACATGACCACCCATTACAT
>site_42
CACCCATCACATGACCACCCATTA
>site_43
ATCACATGACATCACCCATCACAT
>site_44
TGCCCATCACATCACCCATCACAT
>site_45
TCACCATCACATCACCCATCACAT
>site_46
ATCACATGACATCACCTGTCACAT
>site_47
CACCCATCACATGACCACCCATCA
>site_48
ATTACATGATATCACCCATCACAT
>site_49
CCCGCATGACATCACCCATTACAT
>site_50
ATCACATGACCACCCCCGCATGAC
>site_51
CACCTATCACATGACCACCCCCGC
>site_52
ATCACATGACATCACCTATCACAT
>site_53
ATCACGTGACATCACCCATCACAT
>site_54
ATCATGTGATATCACCCATCACGT
>site_55
ATCACGTGATGTCGCCCATCATGT
>site_56
CCATCATATGATCGCCCATCACGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	5	6	1	12	0	8	6	0	7	0	17	0	0	16	0	7	0	9	7	0	12	2
c	5	4	8	3	8	7	0	13	10	15	0	0	15	1	16	8	8	2	0	13	4	11
g	5	2	3	2	0	0	4	4	0	0	0	1	0	0	0	2	0	6	1	0	1	1
t	2	5	5	0	9	2	7	0	0	2	0	16	2	0	1	0	9	0	9	4	0	3
//
; Sites	17
>site_0
GACATAACCCATCACATGGCAT
>site_1
CGCCCATCCCATCACCCATCAC
>site_2
GACATCGCCCATCCCATCACCC
>site_3
CATATCACCCATCACATGACCA
>site_4
CCCATTACATATCACCCATCAC
>site_5
GACATCACCCATTACATATCAC
>site_6
CCCACATGACATCACCCATTAC
>site_7
ATTACATGACAGCACCCATCAC
>site_8
ATGACCACCCATTACATGACAG
>site_9
TGCCCATCACATCACCCATCAC
>site_10
ATGATTGCCCATCACATCACCC
>site_11
TCACCATCACATCACCCATCAC
>site_12
GATATCACCCATCACATGACCA
>site_13
ATTACATGATATCACCCATCAC
>site_14
CCCGCATGACATCACCCATTAC
>site_15
GATGTCGCCCATCATGTGATAT
>site_16
ATGATCGCCCATCACGTGATGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	2	0	0	1	1	1	0	1	0	0	1	0	2	0	0	1	0	2	0	0	1	0	0	0
c	0	1	1	0	1	1	1	0	0	0	0	1	0	0	0	0	2	0	0	1	1	1	1	1
g	0	0	1	0	0	0	0	1	1	1	0	1	0	0	2	0	0	0	1	1	0	1	1	1
t	0	1	0	1	0	0	1	0	1	1	1	0	0	2	0	1	0	0	1	0	0	0	0	0
//
; Sites	2
>site_0
ACCACCCATTACATGACAGCACCC
>site_1
ATGTAATGGGTGATGTCATGCGGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	0	1	1	1	17	0	7	2	2	2	0	17	0	1	1	0	19	0	1	1	1	17	0	5
c	2	2	1	2	1	5	1	2	0	1	1	1	1	0	3	18	0	1	1	1	2	1	5	2
g	1	16	1	16	0	1	11	13	16	0	16	0	1	18	0	1	0	1	17	1	16	1	1	12
t	16	0	16	0	1	13	0	2	1	16	2	1	17	0	15	0	0	17	0	16	0	0	13	0
//
; Sites	19
>site_0
TGTGATGCATGATGTCATGTGATG
>site_1
TGTGATGGGTGATGCCATGTGATG
>site_2
TGTGATGGGTTATGTCATGTGATG
>site_3
TGTGATGGGTGATGCCATGTGACA
>site_4
CCTGTGATGAGTGGTCATGTGATG
>site_5
TGGGATGGGCGATGTCATGTGATG
>site_6
TGTGACAGGTGATGTCATGTGATG
>site_7
TGTGATAGGTGATGTCATGTGATC
>site_8
TGTGATGGGTGATGCCATGTGACA
>site_9
TGTGACAGGTGATGTCATGTGATG
>site_10
TGTGATGAGTGATGTCATGTGATG
>site_11
TGTGATGGGTGATGTCATGTGATA
>site_12
TGTGATGAGTGATGTCATGTGACA
>site_13
TGTGATGGGTGCTGTCATGTAATG
>site_14
CCACCCATTACATGACAGCACCCA
>site_15
GACCACCCATTACATGACAGCACC
>site_16
TGTGACAGGTGATGTCATGTGATG
>site_17
TGTAATGGGTGATGTCATGCGGGG
>site_18
TGTGATAGGTGATGTCATGTGATG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175517_2025-05-16.175517_w6aMRg/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-05-16.175534
; Job done	2025-05-16.175536
; Seconds	0.16
;	user	0.16
;	system	0.04
;	cuser	1.32
;	csystem	0.19
