position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 3 -ci 20 -img_format png -title Oligodendrocyte_precursor_cells_control_MDD_up -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/results/composition/peak-motifs_test_profiles-1str-ovlp_3nt_ci20.tab Citation: van Helden, et al. (2000). Nucleic Acids Res 28, 1000-1010. Sequence file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta Sequence format fasta Sequence type dna Output file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/results/composition/peak-motifs_test_profiles-1str-ovlp_3nt_ci20.tab Oligo length 3 Occurrences counted on a single strands Conditions of applicability checked. Background model estimation: homogeneous repartition Sequence statistics: Nb of sequences 66 Sum of sequence lengths 50692 Min sequence length 0 Max sequence length 1000 Average sequence length 768 Possible positions 50560 Sequences: # length ID 1 1000 chr17:78351273-78354165 2 1000 chr7:74371028-74373138 3 1000 chr19:15263695-15266979 4 1000 chr5:21481240-21482787 5 1000 chr19:940001-941634 6 865 chr17:79577393-79578257 7 1000 chr7:25367977-25369146 8 786 chr17:50556518-50557303 9 680 chr5:83507243-83507922 10 962 chr9:128920217-128921178 11 778 chr15:71850397-71851174 12 1000 chr11:115622582-115623591 13 1000 chr4:65390947-65392403 14 463 chr21:8212969-8213431 15 557 chr2:12514531-12515087 16 282 chr7:99543112-99543393 17 1000 chr11:19755827-19757437 18 343 chr1:3678383-3678725 19 355 chr16:11180501-11180855 20 971 chr7:98807033-98808003 21 1000 chr9:109182842-109183853 22 1000 chr1:231795739-231796838 23 250 chr4:40804798-40805047 24 776 chr7:158849912-158850687 25 1000 chr1:88327322-88328381 26 241 chr15:30470849-30471089 27 1000 chr1:10781920-10783240 28 1000 chr2:235709984-235711000 29 1000 chr22:36155375-36157489 30 1000 chr20:45357204-45358711 31 319 chr17:37521911-37522229 32 1000 chr17:68076940-68077961 33 847 chr1:40204551-40205397 34 645 chr11:66102438-66103082 35 230 chr10:78283335-78283564 36 997 chr7:101184838-101185834 37 635 chr1:205907617-205908251 38 366 chr20:63210047-63210412 39 929 chr9:108478108-108479036 40 1000 chr8:1526671-1527791 41 848 chr10:102758295-102759142 42 1000 chr4:2432494-2434769 43 1000 chr5:172496618-172497687 44 381 chr19:34261005-34261385 45 352 chr7:1064272-1064623 46 315 chr1:229304996-229305310 47 1000 chr12:124745147-124746497 48 1000 chr7:142414637-142415813 49 465 chr5:136164085-136164549 50 200 chr1:2348317-2348516 51 425 chr18:24112991-24113415 52 879 chr6:19554277-19555155 53 1000 chr10:59007924-59009149 54 1000 chr22:20028502-20030044 55 1000 chr18:56137743-56140706 56 1000 chr3:47961574-47962731 57 812 chr16:53643264-53644075 58 663 chr15:23001772-23002434 59 1000 chr16:12970719-12971999 60 1000 chr20:17420697-17421757 61 1000 chr5:137699063-137700433 62 1000 chr22:49888517-49889763 63 1000 chr20:64285534-64287561 64 335 chr17:59694127-59694461 65 208 chr3:177158527-177158734 66 532 chrX:71627887-71628418 Oligonucleotide statistics: Total occurrences 48926 Position interval parameters: Position interval 20 Number of windows 50 Total positions 50560 Degrees of freedom 49 K-mer clustering parameters: Number of clusters 0 Clustering method complete Position intervals: window [min,max] mid seq occ 1 -25 [-499,-480] -489.5 34 647 2 -24 [-479,-460] -469.5 35 685 3 -23 [-459,-440] -449.5 35 700 4 -22 [-439,-420] -429.5 39 741 5 -21 [-419,-400] -409.5 40 786 6 -20 [-399,-380] -389.5 43 832 7 -19 [-379,-360] -369.5 43 860 8 -18 [-359,-340] -349.5 43 860 9 -17 [-339,-320] -329.5 46 895 10 -16 [-319,-300] -309.5 47 938 11 -15 [-299,-280] -289.5 47 940 12 -14 [-279,-260] -269.5 49 965 13 -13 [-259,-240] -249.5 49 980 14 -12 [-239,-220] -229.5 51 1005 15 -11 [-219,-200] -209.5 52 1033 16 -10 [-199,-180] -189.5 54 1055 17 -9 [-179,-160] -169.5 58 1134 18 -8 [-159,-140] -149.5 61 1200 19 -7 [-139,-120] -129.5 63 1227 20 -6 [-119,-100] -109.5 65 1280 21 -5 [-99,-80] -89.5 66 1320 22 -4 [-79,-60] -69.5 66 1320 23 -3 [-59,-40] -49.5 66 1320 24 -2 [-39,-20] -29.5 66 1320 25 -1 [-19,0] -9.5 66 1320 26 0 [1,20] 10.5 66 1320 27 1 [21,40] 30.5 66 1320 28 2 [41,60] 50.5 66 1320 29 3 [61,80] 70.5 66 1320 30 4 [81,100] 90.5 66 1318 31 5 [101,120] 110.5 65 1272 32 6 [121,140] 130.5 62 1220 33 7 [141,160] 150.5 60 1192 34 8 [161,180] 170.5 58 1123 35 9 [181,200] 190.5 53 1048 36 10 [201,220] 210.5 52 1030 37 11 [221,240] 230.5 51 999 38 12 [241,260] 250.5 49 980 39 13 [261,280] 270.5 49 960 40 14 [281,300] 290.5 47 940 41 15 [301,320] 310.5 47 935 42 16 [321,340] 330.5 45 887 43 17 [341,360] 350.5 43 860 44 18 [361,380] 370.5 43 860 45 19 [381,400] 390.5 43 822 46 20 [401,420] 410.5 40 784 47 21 [421,440] 430.5 39 730 48 22 [441,460] 450.5 35 700 49 23 [461,480] 470.5 35 680 50 24 [481,500] 490.5 33 577 Column headers 1 seq pattern sequence 2 id pattern identifier 3 occ pattern occurrences 4 chi2 observed chi-square 5 df degrees of freedom 6 Pval P-value (probability for one word to be a false positive) 7 Eval E-value; expected number of false positives (Eval = Pval * nb_tests) 8 sig Significance (sig = -log10(Eval)) 9 rank rank of the pattern according to sorting criterion 10 -489.5 occurrences in window 1 [-499,-480] 11 -469.5 occurrences in window 2 [-479,-460] 12 -449.5 occurrences in window 3 [-459,-440] 13 -429.5 occurrences in window 4 [-439,-420] 14 -409.5 occurrences in window 5 [-419,-400] 15 -389.5 occurrences in window 6 [-399,-380] 16 -369.5 occurrences in window 7 [-379,-360] 17 -349.5 occurrences in window 8 [-359,-340] 18 -329.5 occurrences in window 9 [-339,-320] 19 -309.5 occurrences in window 10 [-319,-300] 20 -289.5 occurrences in window 11 [-299,-280] 21 -269.5 occurrences in window 12 [-279,-260] 22 -249.5 occurrences in window 13 [-259,-240] 23 -229.5 occurrences in window 14 [-239,-220] 24 -209.5 occurrences in window 15 [-219,-200] 25 -189.5 occurrences in window 16 [-199,-180] 26 -169.5 occurrences in window 17 [-179,-160] 27 -149.5 occurrences in window 18 [-159,-140] 28 -129.5 occurrences in window 19 [-139,-120] 29 -109.5 occurrences in window 20 [-119,-100] 30 -89.5 occurrences in window 21 [-99,-80] 31 -69.5 occurrences in window 22 [-79,-60] 32 -49.5 occurrences in window 23 [-59,-40] 33 -29.5 occurrences in window 24 [-39,-20] 34 -9.5 occurrences in window 25 [-19,0] 35 10.5 occurrences in window 26 [1,20] 36 30.5 occurrences in window 27 [21,40] 37 50.5 occurrences in window 28 [41,60] 38 70.5 occurrences in window 29 [61,80] 39 90.5 occurrences in window 30 [81,100] 40 110.5 occurrences in window 31 [101,120] 41 130.5 occurrences in window 32 [121,140] 42 150.5 occurrences in window 33 [141,160] 43 170.5 occurrences in window 34 [161,180] 44 190.5 occurrences in window 35 [181,200] 45 210.5 occurrences in window 36 [201,220] 46 230.5 occurrences in window 37 [221,240] 47 250.5 occurrences in window 38 [241,260] 48 270.5 occurrences in window 39 [261,280] 49 290.5 occurrences in window 40 [281,300] 50 310.5 occurrences in window 41 [301,320] 51 330.5 occurrences in window 42 [321,340] 52 350.5 occurrences in window 43 [341,360] 53 370.5 occurrences in window 44 [361,380] 54 390.5 occurrences in window 45 [381,400] 55 410.5 occurrences in window 46 [401,420] 56 430.5 occurrences in window 47 [421,440] 57 450.5 occurrences in window 48 [441,460] 58 470.5 occurrences in window 49 [461,480] 59 490.5 occurrences in window 50 [481,500]
| seq | id | occ | chi2 | df | Pval | Eval | sig | rank | -489.5 | -469.5 | -449.5 | -429.5 | -409.5 | -389.5 | -369.5 | -349.5 | -329.5 | -309.5 | -289.5 | -269.5 | -249.5 | -229.5 | -209.5 | -189.5 | -169.5 | -149.5 | -129.5 | -109.5 | -89.5 | -69.5 | -49.5 | -29.5 | -9.5 | 10.5 | 30.5 | 50.5 | 70.5 | 90.5 | 110.5 | 130.5 | 150.5 | 170.5 | 190.5 | 210.5 | 230.5 | 250.5 | 270.5 | 290.5 | 310.5 | 330.5 | 350.5 | 370.5 | 390.5 | 410.5 | 430.5 | 450.5 | 470.5 | 490.5 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ccc | ccc | 994 | 118.4 | 49 | 1.1e-07 | 7.3e-06 | 5.14 | 1 | 15 | 14 | 15 | 20 | 8 | 13 | 14 | 14 | 12 | 16 | 28 | 16 | 10 | 11 | 9 | 17 | 15 | 19 | 18 | 20 | 34 | 33 | 35 | 24 | 24 | 34 | 35 | 18 | 33 | 25 | 19 | 45 | 42 | 17 | 33 | 23 | 17 | 24 | 21 | 12 | 12 | 10 | 20 | 17 | 10 | 23 | 7 | 15 | 15 | 13 |
| aaa | aaa | 1126 | 118.4 | 49 | 1.1e-07 | 7.3e-06 | 5.14 | 2 | 20 | 15 | 12 | 16 | 20 | 22 | 18 | 35 | 29 | 31 | 18 | 18 | 16 | 18 | 22 | 28 | 28 | 25 | 27 | 41 | 24 | 19 | 23 | 39 | 53 | 12 | 14 | 33 | 29 | 27 | 21 | 27 | 15 | 16 | 23 | 30 | 35 | 22 | 16 | 20 | 24 | 16 | 12 | 16 | 20 | 9 | 23 | 20 | 13 | 16 |
| ttt | ttt | 1185 | 114.4 | 49 | 3.8e-07 | 2.4e-05 | 4.62 | 3 | 11 | 7 | 8 | 5 | 29 | 18 | 15 | 10 | 26 | 31 | 39 | 27 | 26 | 27 | 19 | 20 | 30 | 42 | 32 | 26 | 34 | 34 | 28 | 30 | 16 | 30 | 35 | 37 | 20 | 20 | 22 | 25 | 33 | 18 | 24 | 25 | 22 | 13 | 28 | 21 | 27 | 37 | 24 | 25 | 18 | 28 | 21 | 12 | 17 | 13 |
| cac | cac | 855 | 78.7 | 49 | 4.5e-03 | 0.29 | 0.54 | 4 | 7 | 12 | 7 | 15 | 10 | 21 | 8 | 9 | 20 | 11 | 29 | 17 | 17 | 13 | 12 | 24 | 19 | 32 | 22 | 19 | 20 | 19 | 29 | 16 | 18 | 23 | 31 | 26 | 39 | 31 | 12 | 23 | 17 | 18 | 17 | 15 | 21 | 16 | 12 | 14 | 12 | 13 | 10 | 9 | 15 | 9 | 13 | 10 | 13 | 10 |
| ggg | ggg | 1271 | 74.8 | 49 | 1.0e-02 | 0.66 | 0.18 | 5 | 20 | 22 | 18 | 16 | 23 | 19 | 22 | 25 | 26 | 18 | 15 | 19 | 20 | 19 | 27 | 34 | 26 | 31 | 22 | 35 | 23 | 29 | 29 | 30 | 45 | 34 | 39 | 32 | 36 | 29 | 50 | 23 | 25 | 20 | 43 | 18 | 21 | 27 | 25 | 23 | 30 | 34 | 24 | 25 | 27 | 24 | 12 | 16 | 11 | 10 |
| gag | gag | 1149 | 71.9 | 49 | 1.8e-02 | 1.2 | -0.06 | 6 | 27 | 14 | 24 | 23 | 25 | 20 | 22 | 23 | 24 | 28 | 11 | 18 | 23 | 23 | 27 | 19 | 25 | 24 | 28 | 36 | 18 | 24 | 33 | 33 | 33 | 33 | 36 | 23 | 18 | 35 | 23 | 27 | 30 | 20 | 21 | 25 | 20 | 24 | 19 | 23 | 22 | 31 | 17 | 19 | 18 | 9 | 17 | 20 | 9 | 5 |
| ctg | ctg | 1427 | 71.1 | 49 | 2.1e-02 | 1.4 | -0.13 | 7 | 13 | 21 | 18 | 14 | 12 | 19 | 31 | 26 | 18 | 18 | 12 | 33 | 21 | 30 | 17 | 21 | 34 | 30 | 39 | 38 | 36 | 42 | 39 | 45 | 41 | 37 | 41 | 39 | 38 | 42 | 46 | 42 | 27 | 30 | 29 | 31 | 25 | 32 | 20 | 33 | 28 | 25 | 31 | 39 | 33 | 14 | 18 | 26 | 17 | 16 |
| ctc | ctc | 950 | 70.9 | 49 | 2.2e-02 | 1.4 | -0.15 | 8 | 11 | 13 | 2 | 18 | 12 | 19 | 10 | 15 | 16 | 13 | 16 | 13 | 15 | 17 | 14 | 12 | 16 | 18 | 28 | 29 | 29 | 24 | 32 | 26 | 27 | 33 | 30 | 26 | 32 | 19 | 28 | 32 | 20 | 29 | 18 | 15 | 17 | 19 | 17 | 20 | 12 | 11 | 17 | 14 | 11 | 14 | 19 | 28 | 12 | 12 |
| agg | agg | 1184 | 67.9 | 49 | 3.8e-02 | 2.5 | -0.39 | 9 | 31 | 18 | 20 | 23 | 26 | 18 | 18 | 17 | 28 | 30 | 21 | 27 | 33 | 28 | 24 | 16 | 19 | 24 | 30 | 34 | 26 | 34 | 30 | 39 | 35 | 25 | 27 | 26 | 22 | 32 | 27 | 24 | 33 | 27 | 25 | 23 | 19 | 24 | 20 | 26 | 27 | 25 | 15 | 13 | 17 | 14 | 12 | 14 | 8 | 10 |
| aga | aga | 1105 | 67.8 | 49 | 3.9e-02 | 2.5 | -0.39 | 10 | 22 | 11 | 22 | 16 | 27 | 21 | 25 | 18 | 26 | 26 | 21 | 11 | 32 | 20 | 30 | 26 | 25 | 26 | 35 | 29 | 28 | 21 | 32 | 24 | 36 | 34 | 29 | 25 | 21 | 32 | 20 | 19 | 28 | 17 | 17 | 25 | 13 | 23 | 21 | 16 | 20 | 20 | 12 | 23 | 15 | 11 | 20 | 15 | 10 | 9 |
| tat | tat | 534 | 66.1 | 49 | 5.2e-02 | 3.3 | -0.52 | 11 | 7 | 15 | 11 | 2 | 9 | 15 | 7 | 5 | 9 | 13 | 13 | 12 | 12 | 11 | 10 | 11 | 14 | 14 | 12 | 5 | 20 | 19 | 16 | 12 | 8 | 14 | 7 | 18 | 15 | 9 | 15 | 11 | 16 | 14 | 7 | 13 | 10 | 7 | 10 | 6 | 11 | 5 | 7 | 13 | 2 | 12 | 8 | 6 | 5 | 11 |
| tta | tta | 610 | 65.9 | 49 | 5.4e-02 | 3.5 | -0.54 | 12 | 6 | 8 | 6 | 4 | 10 | 10 | 8 | 10 | 8 | 12 | 18 | 7 | 13 | 17 | 12 | 8 | 18 | 25 | 22 | 12 | 21 | 23 | 11 | 16 | 8 | 17 | 11 | 13 | 17 | 12 | 15 | 16 | 13 | 13 | 15 | 14 | 17 | 10 | 7 | 12 | 10 | 9 | 12 | 11 | 4 | 11 | 11 | 4 | 7 | 16 |
| gca | gca | 924 | 65.2 | 49 | 6.1e-02 | 3.9 | -0.59 | 13 | 17 | 7 | 10 | 20 | 18 | 16 | 16 | 15 | 16 | 21 | 20 | 14 | 19 | 19 | 17 | 18 | 18 | 17 | 17 | 20 | 21 | 15 | 18 | 17 | 31 | 41 | 31 | 27 | 29 | 33 | 14 | 24 | 16 | 30 | 24 | 18 | 21 | 18 | 15 | 16 | 18 | 13 | 11 | 13 | 18 | 17 | 9 | 5 | 15 | 11 |
| aac | aac | 587 | 62.3 | 49 | 9.5e-02 | 6.1 | -0.79 | 14 | 3 | 8 | 3 | 10 | 5 | 10 | 8 | 5 | 14 | 16 | 9 | 12 | 10 | 6 | 11 | 20 | 9 | 16 | 20 | 26 | 13 | 14 | 14 | 16 | 22 | 18 | 9 | 11 | 15 | 15 | 11 | 12 | 16 | 12 | 8 | 12 | 18 | 12 | 15 | 15 | 7 | 11 | 13 | 4 | 12 | 8 | 13 | 6 | 7 | 7 |
| cta | cta | 474 | 62.0 | 49 | 1.0e-01 | 6.4 | -0.81 | 15 | 7 | 12 | 6 | 4 | 12 | 13 | 7 | 8 | 9 | 13 | 11 | 11 | 14 | 8 | 15 | 17 | 13 | 7 | 14 | 11 | 8 | 12 | 13 | 17 | 13 | 8 | 12 | 14 | 15 | 9 | 13 | 11 | 17 | 11 | 9 | 6 | 6 | 7 | 8 | 5 | 5 | 4 | 4 | 7 | 3 | 9 | 7 | 2 | 7 | 0 |
| tag | tag | 482 | 61.4 | 49 | 1.1e-01 | 7.1 | -0.85 | 16 | 9 | 4 | 6 | 7 | 8 | 11 | 7 | 6 | 11 | 11 | 13 | 5 | 17 | 15 | 23 | 9 | 11 | 10 | 16 | 9 | 16 | 14 | 9 | 11 | 15 | 10 | 13 | 13 | 14 | 8 | 15 | 6 | 12 | 11 | 9 | 10 | 11 | 4 | 6 | 7 | 5 | 6 | 4 | 6 | 9 | 8 | 5 | 3 | 9 | 5 |
| ccg | ccg | 341 | 60.6 | 49 | 1.2e-01 | 7.9 | -0.90 | 17 | 1 | 2 | 7 | 3 | 5 | 3 | 0 | 2 | 3 | 6 | 3 | 3 | 3 | 7 | 2 | 5 | 5 | 4 | 6 | 10 | 12 | 12 | 9 | 8 | 10 | 8 | 15 | 10 | 10 | 10 | 13 | 18 | 12 | 12 | 8 | 12 | 10 | 8 | 4 | 7 | 6 | 5 | 9 | 6 | 4 | 8 | 4 | 3 | 4 | 4 |
| gga | gga | 1025 | 59.5 | 49 | 1.4e-01 | 9.2 | -0.96 | 18 | 25 | 18 | 19 | 15 | 19 | 16 | 19 | 23 | 27 | 26 | 10 | 28 | 18 | 21 | 18 | 14 | 15 | 17 | 20 | 26 | 23 | 29 | 28 | 34 | 32 | 25 | 30 | 16 | 25 | 33 | 26 | 26 | 21 | 19 | 18 | 22 | 16 | 23 | 19 | 22 | 20 | 20 | 17 | 16 | 16 | 12 | 16 | 11 | 9 | 7 |
| tca | tca | 874 | 58.2 | 49 | 1.7e-01 | 11 | -1.05 | 19 | 7 | 14 | 6 | 14 | 9 | 15 | 15 | 11 | 20 | 13 | 17 | 17 | 20 | 14 | 26 | 24 | 18 | 26 | 27 | 18 | 19 | 25 | 28 | 28 | 13 | 29 | 17 | 28 | 27 | 20 | 27 | 19 | 23 | 31 | 10 | 16 | 16 | 20 | 20 | 16 | 11 | 10 | 14 | 7 | 11 | 10 | 11 | 11 | 12 | 14 |
| tct | tct | 1004 | 57.9 | 49 | 1.8e-01 | 11 | -1.06 | 20 | 10 | 16 | 8 | 16 | 13 | 12 | 11 | 18 | 12 | 11 | 15 | 10 | 20 | 23 | 20 | 20 | 21 | 15 | 26 | 34 | 26 | 26 | 23 | 29 | 29 | 30 | 27 | 34 | 33 | 19 | 35 | 30 | 24 | 29 | 20 | 15 | 16 | 22 | 21 | 25 | 16 | 11 | 21 | 21 | 16 | 11 | 16 | 24 | 14 | 10 |
| tgg | tgg | 1173 | 56.2 | 49 | 2.2e-01 | 14 | -1.16 | 21 | 10 | 25 | 24 | 8 | 15 | 16 | 25 | 21 | 24 | 21 | 17 | 28 | 23 | 21 | 21 | 17 | 19 | 23 | 25 | 26 | 27 | 31 | 31 | 33 | 35 | 38 | 35 | 34 | 38 | 39 | 30 | 29 | 30 | 28 | 19 | 25 | 20 | 23 | 16 | 24 | 21 | 14 | 18 | 30 | 26 | 18 | 7 | 18 | 13 | 14 |
| ctt | ctt | 871 | 54.4 | 49 | 2.8e-01 | 18 | -1.25 | 22 | 13 | 2 | 9 | 14 | 13 | 13 | 14 | 18 | 14 | 9 | 10 | 19 | 21 | 19 | 13 | 22 | 28 | 25 | 20 | 25 | 17 | 31 | 14 | 19 | 19 | 27 | 22 | 24 | 22 | 27 | 16 | 19 | 21 | 17 | 20 | 21 | 20 | 11 | 25 | 23 | 14 | 8 | 17 | 16 | 13 | 14 | 17 | 11 | 14 | 11 |
| agc | agc | 977 | 54.3 | 49 | 2.8e-01 | 18 | -1.25 | 23 | 14 | 11 | 7 | 14 | 12 | 18 | 26 | 14 | 20 | 15 | 10 | 22 | 14 | 17 | 15 | 18 | 16 | 21 | 17 | 26 | 27 | 32 | 24 | 23 | 25 | 39 | 33 | 32 | 28 | 39 | 26 | 27 | 21 | 23 | 28 | 23 | 17 | 15 | 17 | 17 | 19 | 14 | 15 | 12 | 16 | 17 | 12 | 8 | 13 | 8 |
| aca | aca | 912 | 53.6 | 49 | 3.0e-01 | 19 | -1.29 | 24 | 9 | 9 | 10 | 13 | 10 | 13 | 20 | 13 | 17 | 17 | 28 | 14 | 20 | 17 | 17 | 23 | 29 | 28 | 25 | 32 | 17 | 25 | 21 | 22 | 18 | 23 | 29 | 21 | 34 | 30 | 20 | 15 | 27 | 14 | 16 | 19 | 19 | 19 | 16 | 15 | 14 | 12 | 15 | 6 | 19 | 13 | 18 | 9 | 11 | 11 |
| att | att | 731 | 53.5 | 49 | 3.0e-01 | 20 | -1.29 | 25 | 7 | 12 | 14 | 6 | 13 | 10 | 12 | 18 | 15 | 13 | 17 | 12 | 18 | 12 | 17 | 12 | 20 | 23 | 24 | 13 | 25 | 25 | 24 | 12 | 15 | 13 | 13 | 23 | 16 | 9 | 21 | 24 | 20 | 20 | 10 | 18 | 12 | 14 | 12 | 15 | 12 | 12 | 9 | 14 | 10 | 12 | 10 | 5 | 5 | 13 |
| gcg | gcg | 287 | 52.8 | 49 | 3.3e-01 | 21 | -1.32 | 26 | 3 | 4 | 4 | 4 | 1 | 7 | 3 | 1 | 2 | 4 | 2 | 3 | 3 | 5 | 6 | 4 | 8 | 2 | 10 | 7 | 11 | 3 | 11 | 18 | 7 | 6 | 8 | 7 | 8 | 11 | 8 | 5 | 8 | 3 | 11 | 6 | 7 | 10 | 9 | 4 | 3 | 9 | 4 | 6 | 4 | 3 | 3 | 4 | 4 | 3 |
| ggt | ggt | 679 | 52.6 | 49 | 3.4e-01 | 22 | -1.33 | 27 | 8 | 16 | 13 | 10 | 12 | 11 | 12 | 8 | 15 | 9 | 16 | 15 | 19 | 16 | 11 | 12 | 12 | 18 | 16 | 25 | 15 | 13 | 15 | 18 | 20 | 16 | 16 | 25 | 18 | 15 | 20 | 13 | 19 | 19 | 11 | 7 | 10 | 11 | 8 | 18 | 15 | 10 | 13 | 15 | 15 | 12 | 1 | 7 | 6 | 4 |
| gtt | gtt | 613 | 52.6 | 49 | 3.4e-01 | 22 | -1.34 | 28 | 4 | 10 | 7 | 5 | 3 | 11 | 6 | 7 | 6 | 12 | 13 | 14 | 8 | 13 | 13 | 12 | 6 | 18 | 20 | 23 | 16 | 20 | 12 | 26 | 13 | 16 | 18 | 19 | 15 | 15 | 16 | 11 | 12 | 15 | 14 | 4 | 15 | 9 | 13 | 16 | 13 | 12 | 13 | 12 | 10 | 15 | 8 | 8 | 7 | 9 |
| aat | aat | 754 | 51.8 | 49 | 3.6e-01 | 23 | -1.37 | 29 | 11 | 12 | 14 | 9 | 15 | 15 | 12 | 21 | 12 | 20 | 14 | 14 | 13 | 13 | 25 | 14 | 22 | 22 | 22 | 20 | 23 | 18 | 18 | 19 | 21 | 9 | 9 | 14 | 16 | 12 | 18 | 17 | 13 | 20 | 11 | 18 | 14 | 14 | 18 | 13 | 14 | 15 | 14 | 9 | 8 | 8 | 13 | 12 | 14 | 12 |
| tac | tac | 385 | 51.8 | 49 | 3.6e-01 | 23 | -1.37 | 30 | 3 | 6 | 4 | 6 | 5 | 5 | 8 | 10 | 5 | 5 | 15 | 8 | 7 | 6 | 7 | 9 | 18 | 12 | 8 | 9 | 7 | 13 | 8 | 7 | 7 | 8 | 11 | 9 | 7 | 10 | 11 | 7 | 8 | 7 | 13 | 6 | 4 | 13 | 8 | 7 | 6 | 5 | 4 | 11 | 4 | 10 | 4 | 2 | 6 | 6 |
| gcc | gcc | 994 | 51.5 | 49 | 3.8e-01 | 24 | -1.38 | 31 | 15 | 15 | 14 | 11 | 11 | 15 | 22 | 18 | 19 | 13 | 16 | 18 | 14 | 23 | 12 | 17 | 20 | 17 | 18 | 24 | 35 | 33 | 30 | 21 | 18 | 31 | 32 | 30 | 24 | 33 | 33 | 28 | 30 | 14 | 22 | 31 | 21 | 15 | 14 | 16 | 20 | 14 | 20 | 11 | 18 | 17 | 13 | 15 | 14 | 9 |
| tgt | tgt | 925 | 50.9 | 49 | 4.0e-01 | 26 | -1.41 | 32 | 13 | 12 | 20 | 12 | 9 | 13 | 17 | 13 | 9 | 16 | 12 | 22 | 10 | 21 | 16 | 17 | 20 | 23 | 27 | 25 | 32 | 28 | 27 | 28 | 27 | 20 | 22 | 23 | 20 | 18 | 24 | 20 | 18 | 13 | 21 | 14 | 17 | 21 | 24 | 11 | 15 | 25 | 21 | 23 | 19 | 18 | 13 | 15 | 14 | 7 |
| gaa | gaa | 890 | 49.4 | 49 | 4.6e-01 | 29 | -1.47 | 33 | 16 | 16 | 11 | 8 | 17 | 17 | 18 | 20 | 19 | 24 | 16 | 17 | 16 | 12 | 15 | 19 | 9 | 28 | 21 | 27 | 31 | 24 | 21 | 27 | 32 | 18 | 18 | 20 | 13 | 29 | 24 | 18 | 17 | 17 | 17 | 17 | 15 | 18 | 22 | 17 | 18 | 13 | 16 | 13 | 14 | 9 | 17 | 13 | 9 | 7 |
| gtc | gtc | 573 | 48.2 | 49 | 5.1e-01 | 32 | -1.51 | 34 | 5 | 8 | 8 | 8 | 6 | 2 | 13 | 8 | 9 | 10 | 6 | 6 | 13 | 13 | 13 | 16 | 8 | 14 | 18 | 15 | 14 | 13 | 16 | 19 | 16 | 12 | 18 | 18 | 22 | 15 | 20 | 18 | 12 | 20 | 14 | 10 | 6 | 17 | 12 | 5 | 6 | 8 | 10 | 8 | 12 | 8 | 5 | 8 | 8 | 4 |
| ata | ata | 505 | 48.2 | 49 | 5.1e-01 | 32 | -1.51 | 35 | 4 | 6 | 5 | 7 | 5 | 9 | 9 | 12 | 13 | 10 | 10 | 9 | 11 | 11 | 17 | 9 | 18 | 9 | 12 | 12 | 22 | 10 | 13 | 13 | 12 | 9 | 7 | 12 | 11 | 11 | 14 | 7 | 10 | 13 | 9 | 17 | 7 | 7 | 11 | 5 | 12 | 8 | 10 | 12 | 5 | 8 | 8 | 5 | 8 | 11 |
| cag | cag | 1435 | 48.1 | 49 | 5.1e-01 | 32 | -1.51 | 36 | 15 | 18 | 17 | 17 | 23 | 19 | 30 | 16 | 22 | 28 | 27 | 31 | 25 | 19 | 27 | 28 | 24 | 36 | 31 | 34 | 32 | 39 | 41 | 42 | 38 | 57 | 45 | 39 | 40 | 52 | 31 | 36 | 40 | 38 | 34 | 31 | 28 | 25 | 29 | 24 | 29 | 20 | 21 | 18 | 21 | 31 | 19 | 13 | 18 | 17 |
| atc | atc | 526 | 48.1 | 49 | 5.1e-01 | 32 | -1.51 | 37 | 8 | 7 | 5 | 12 | 11 | 12 | 8 | 8 | 10 | 13 | 14 | 4 | 14 | 14 | 19 | 12 | 10 | 13 | 12 | 10 | 12 | 9 | 15 | 14 | 13 | 16 | 8 | 16 | 15 | 10 | 17 | 9 | 6 | 12 | 6 | 16 | 8 | 10 | 15 | 10 | 9 | 7 | 6 | 7 | 6 | 9 | 5 | 7 | 11 | 6 |
| caa | caa | 759 | 48.0 | 49 | 5.1e-01 | 33 | -1.52 | 38 | 10 | 12 | 8 | 16 | 11 | 8 | 14 | 14 | 21 | 22 | 15 | 12 | 20 | 15 | 22 | 22 | 21 | 14 | 24 | 21 | 18 | 20 | 13 | 11 | 16 | 18 | 18 | 17 | 24 | 18 | 16 | 18 | 19 | 19 | 12 | 12 | 16 | 19 | 12 | 16 | 14 | 11 | 9 | 4 | 15 | 9 | 12 | 9 | 12 | 10 |
| agt | agt | 696 | 48.0 | 49 | 5.2e-01 | 33 | -1.52 | 39 | 6 | 7 | 11 | 10 | 8 | 6 | 10 | 15 | 9 | 16 | 18 | 11 | 11 | 10 | 25 | 13 | 15 | 16 | 18 | 14 | 16 | 15 | 12 | 19 | 12 | 21 | 28 | 23 | 19 | 21 | 24 | 14 | 21 | 19 | 16 | 11 | 20 | 12 | 9 | 8 | 13 | 11 | 9 | 9 | 13 | 12 | 10 | 11 | 11 | 8 |
| gat | gat | 532 | 46.8 | 49 | 5.6e-01 | 36 | -1.56 | 40 | 9 | 4 | 10 | 9 | 8 | 7 | 8 | 8 | 16 | 11 | 6 | 3 | 17 | 12 | 15 | 14 | 14 | 11 | 11 | 9 | 20 | 10 | 13 | 9 | 16 | 14 | 12 | 18 | 16 | 17 | 13 | 16 | 13 | 10 | 9 | 10 | 12 | 10 | 9 | 8 | 9 | 8 | 6 | 12 | 6 | 4 | 5 | 5 | 13 | 7 |
| gtg | gtg | 943 | 46.6 | 49 | 5.7e-01 | 36 | -1.56 | 41 | 10 | 16 | 22 | 14 | 16 | 11 | 16 | 18 | 15 | 14 | 22 | 19 | 14 | 20 | 16 | 15 | 21 | 18 | 15 | 26 | 35 | 24 | 20 | 24 | 26 | 25 | 25 | 27 | 15 | 22 | 25 | 25 | 32 | 17 | 16 | 22 | 18 | 14 | 14 | 15 | 14 | 21 | 21 | 21 | 21 | 16 | 13 | 14 | 17 | 6 |
| aag | aag | 895 | 46.2 | 49 | 5.9e-01 | 38 | -1.58 | 42 | 20 | 15 | 12 | 13 | 17 | 14 | 21 | 22 | 20 | 24 | 16 | 19 | 23 | 19 | 17 | 17 | 18 | 18 | 23 | 24 | 31 | 23 | 19 | 18 | 20 | 23 | 23 | 24 | 21 | 27 | 29 | 19 | 19 | 17 | 20 | 16 | 12 | 19 | 14 | 13 | 22 | 13 | 9 | 13 | 14 | 7 | 13 | 12 | 5 | 8 |
| cgc | cgc | 288 | 45.8 | 49 | 6.1e-01 | 39 | -1.59 | 43 | 2 | 6 | 6 | 8 | 3 | 5 | 0 | 2 | 0 | 3 | 6 | 4 | 2 | 10 | 2 | 4 | 5 | 2 | 9 | 10 | 7 | 9 | 12 | 8 | 5 | 5 | 11 | 11 | 8 | 12 | 9 | 5 | 6 | 7 | 9 | 10 | 11 | 5 | 4 | 2 | 8 | 5 | 4 | 4 | 6 | 3 | 4 | 1 | 7 | 1 |
| ttg | ttg | 770 | 45.6 | 49 | 6.1e-01 | 39 | -1.59 | 44 | 9 | 6 | 15 | 7 | 8 | 17 | 17 | 15 | 12 | 16 | 10 | 16 | 15 | 16 | 17 | 13 | 13 | 20 | 22 | 25 | 21 | 24 | 24 | 14 | 24 | 22 | 19 | 23 | 20 | 18 | 14 | 14 | 14 | 16 | 15 | 17 | 12 | 11 | 27 | 17 | 13 | 10 | 14 | 13 | 8 | 19 | 12 | 11 | 10 | 5 |
| ttc | ttc | 828 | 44.7 | 49 | 6.5e-01 | 41 | -1.62 | 45 | 7 | 11 | 8 | 13 | 10 | 8 | 9 | 16 | 10 | 10 | 13 | 20 | 17 | 14 | 17 | 22 | 22 | 24 | 17 | 25 | 16 | 29 | 19 | 22 | 17 | 21 | 21 | 23 | 23 | 22 | 23 | 20 | 26 | 25 | 15 | 10 | 18 | 15 | 15 | 24 | 14 | 11 | 15 | 20 | 19 | 11 | 12 | 7 | 9 | 13 |
| cat | cat | 683 | 43.7 | 49 | 6.9e-01 | 44 | -1.64 | 46 | 9 | 6 | 5 | 17 | 11 | 14 | 13 | 17 | 12 | 11 | 19 | 10 | 13 | 19 | 17 | 13 | 18 | 15 | 16 | 14 | 14 | 13 | 21 | 19 | 18 | 19 | 20 | 17 | 17 | 11 | 22 | 12 | 12 | 18 | 7 | 18 | 12 | 14 | 15 | 13 | 12 | 13 | 15 | 8 | 10 | 16 | 5 | 6 | 9 | 8 |
| gct | gct | 915 | 43.1 | 49 | 7.1e-01 | 46 | -1.66 | 47 | 7 | 10 | 9 | 15 | 12 | 17 | 14 | 15 | 13 | 12 | 9 | 26 | 16 | 21 | 13 | 17 | 19 | 18 | 31 | 23 | 19 | 35 | 25 | 26 | 26 | 27 | 31 | 26 | 26 | 26 | 22 | 24 | 25 | 18 | 22 | 16 | 19 | 18 | 14 | 15 | 17 | 11 | 20 | 14 | 19 | 10 | 15 | 15 | 6 | 11 |
| cct | cct | 1072 | 40.9 | 49 | 7.9e-01 | 51 | -1.70 | 48 | 17 | 16 | 12 | 12 | 12 | 15 | 30 | 24 | 19 | 15 | 15 | 19 | 20 | 19 | 18 | 17 | 26 | 30 | 22 | 29 | 34 | 28 | 31 | 30 | 26 | 29 | 28 | 28 | 32 | 29 | 29 | 30 | 23 | 21 | 26 | 21 | 12 | 16 | 15 | 24 | 18 | 13 | 17 | 26 | 16 | 18 | 14 | 20 | 19 | 12 |
| atg | atg | 738 | 40.1 | 49 | 8.2e-01 | 52 | -1.72 | 49 | 16 | 11 | 16 | 10 | 14 | 21 | 11 | 13 | 13 | 16 | 13 | 12 | 13 | 18 | 16 | 16 | 19 | 20 | 13 | 14 | 16 | 12 | 20 | 23 | 20 | 20 | 18 | 16 | 23 | 20 | 16 | 13 | 21 | 14 | 12 | 9 | 18 | 15 | 12 | 12 | 14 | 12 | 17 | 9 | 7 | 10 | 9 | 11 | 14 | 10 |
| act | act | 727 | 39.8 | 49 | 8.2e-01 | 53 | -1.72 | 50 | 6 | 9 | 5 | 9 | 12 | 16 | 9 | 10 | 13 | 12 | 13 | 21 | 14 | 13 | 7 | 17 | 21 | 20 | 22 | 18 | 14 | 18 | 17 | 23 | 20 | 18 | 16 | 16 | 18 | 24 | 18 | 18 | 13 | 17 | 13 | 16 | 22 | 16 | 17 | 16 | 7 | 12 | 17 | 13 | 8 | 11 | 16 | 9 | 11 | 6 |
| tga | tga | 876 | 39.1 | 49 | 8.4e-01 | 54 | -1.73 | 51 | 11 | 11 | 12 | 13 | 13 | 12 | 18 | 15 | 16 | 13 | 11 | 15 | 15 | 15 | 16 | 11 | 20 | 27 | 18 | 25 | 23 | 21 | 23 | 28 | 25 | 14 | 18 | 26 | 13 | 27 | 24 | 23 | 24 | 21 | 14 | 16 | 21 | 14 | 20 | 23 | 19 | 19 | 20 | 14 | 12 | 9 | 15 | 15 | 19 | 9 |
| taa | taa | 577 | 38.6 | 49 | 8.6e-01 | 55 | -1.74 | 52 | 6 | 8 | 7 | 8 | 12 | 10 | 7 | 14 | 10 | 11 | 11 | 14 | 8 | 12 | 14 | 13 | 16 | 19 | 17 | 19 | 17 | 11 | 15 | 22 | 14 | 7 | 10 | 9 | 16 | 9 | 15 | 14 | 11 | 14 | 12 | 15 | 14 | 7 | 11 | 10 | 11 | 13 | 10 | 10 | 7 | 4 | 8 | 9 | 5 | 11 |
| cgg | cgg | 302 | 38.5 | 49 | 8.6e-01 | 55 | -1.74 | 53 | 2 | 2 | 3 | 6 | 4 | 3 | 1 | 4 | 5 | 2 | 4 | 6 | 2 | 2 | 6 | 7 | 3 | 7 | 8 | 9 | 9 | 3 | 9 | 9 | 12 | 7 | 10 | 7 | 12 | 11 | 9 | 8 | 6 | 8 | 7 | 4 | 10 | 12 | 6 | 4 | 9 | 7 | 7 | 5 | 7 | 4 | 4 | 5 | 1 | 4 |
| gac | gac | 583 | 38.2 | 49 | 8.7e-01 | 55 | -1.74 | 54 | 5 | 6 | 9 | 9 | 12 | 7 | 13 | 10 | 9 | 6 | 12 | 14 | 14 | 11 | 9 | 6 | 18 | 8 | 16 | 11 | 10 | 16 | 18 | 20 | 14 | 11 | 16 | 11 | 16 | 17 | 18 | 13 | 14 | 12 | 8 | 13 | 12 | 11 | 10 | 13 | 12 | 15 | 14 | 10 | 7 | 10 | 15 | 10 | 8 | 4 |
| tcc | tcc | 857 | 35.6 | 49 | 9.2e-01 | 59 | -1.77 | 55 | 10 | 10 | 8 | 13 | 14 | 13 | 14 | 16 | 14 | 19 | 13 | 14 | 17 | 17 | 12 | 12 | 17 | 25 | 17 | 21 | 23 | 20 | 28 | 19 | 28 | 21 | 30 | 21 | 25 | 19 | 22 | 27 | 15 | 29 | 21 | 15 | 10 | 17 | 15 | 17 | 11 | 14 | 12 | 20 | 17 | 18 | 12 | 14 | 12 | 9 |
| ggc | ggc | 951 | 34.4 | 49 | 9.4e-01 | 60 | -1.78 | 56 | 11 | 9 | 15 | 13 | 10 | 14 | 11 | 12 | 16 | 17 | 17 | 16 | 20 | 17 | 18 | 16 | 18 | 16 | 28 | 17 | 23 | 24 | 26 | 28 | 29 | 34 | 30 | 24 | 28 | 28 | 24 | 27 | 27 | 19 | 25 | 20 | 24 | 24 | 18 | 16 | 17 | 19 | 10 | 16 | 19 | 13 | 9 | 16 | 9 | 14 |
| acc | acc | 581 | 33.8 | 49 | 9.5e-01 | 61 | -1.78 | 57 | 4 | 9 | 8 | 8 | 8 | 9 | 7 | 10 | 10 | 11 | 17 | 12 | 10 | 6 | 8 | 17 | 13 | 15 | 13 | 11 | 13 | 18 | 22 | 14 | 17 | 15 | 17 | 13 | 17 | 18 | 11 | 17 | 12 | 12 | 11 | 7 | 12 | 9 | 10 | 16 | 12 | 14 | 8 | 13 | 5 | 13 | 6 | 7 | 9 | 7 |
| gta | gta | 389 | 33.7 | 49 | 9.5e-01 | 61 | -1.79 | 58 | 9 | 6 | 10 | 9 | 7 | 8 | 7 | 5 | 5 | 6 | 12 | 12 | 8 | 7 | 10 | 7 | 13 | 8 | 8 | 7 | 10 | 10 | 11 | 8 | 8 | 6 | 11 | 8 | 10 | 9 | 9 | 4 | 8 | 8 | 10 | 5 | 10 | 6 | 10 | 7 | 7 | 7 | 2 | 9 | 8 | 7 | 4 | 4 | 4 | 5 |
| cca | cca | 1018 | 33.3 | 49 | 9.6e-01 | 61 | -1.79 | 59 | 12 | 17 | 12 | 15 | 16 | 18 | 15 | 17 | 22 | 22 | 24 | 25 | 17 | 21 | 13 | 23 | 17 | 24 | 22 | 17 | 26 | 30 | 35 | 21 | 27 | 31 | 32 | 26 | 27 | 30 | 22 | 28 | 21 | 20 | 18 | 23 | 21 | 17 | 18 | 19 | 22 | 24 | 13 | 11 | 19 | 19 | 14 | 12 | 16 | 7 |
| tgc | tgc | 905 | 32.9 | 49 | 9.6e-01 | 62 | -1.79 | 60 | 16 | 8 | 14 | 10 | 17 | 22 | 15 | 21 | 14 | 14 | 16 | 16 | 18 | 23 | 15 | 19 | 23 | 20 | 19 | 24 | 24 | 22 | 23 | 20 | 24 | 29 | 27 | 26 | 22 | 21 | 21 | 25 | 21 | 15 | 19 | 18 | 14 | 15 | 17 | 16 | 13 | 11 | 24 | 10 | 20 | 16 | 15 | 13 | 13 | 7 |
| cgt | cgt | 218 | 23.7 | 49 | 1.0e+00 | 64 | -1.81 | 61 | 2 | 3 | 4 | 4 | 3 | 3 | 2 | 1 | 3 | 5 | 2 | 3 | 3 | 4 | 3 | 6 | 3 | 3 | 1 | 5 | 11 | 8 | 8 | 11 | 3 | 4 | 4 | 5 | 5 | 3 | 7 | 9 | 7 | 8 | 6 | 8 | 1 | 4 | 6 | 5 | 3 | 1 | 2 | 4 | 2 | 5 | 4 | 3 | 5 | 3 |
| acg | acg | 195 | 6.5 | 49 | 1.0e+00 | 64 | -1.81 | 62 | 1 | 4 | 2 | 9 | 2 | 4 | 3 | 2 | 1 | 2 | 9 | 3 | 3 | 2 | 3 | 4 | 2 | 5 | 5 | 4 | 7 | 3 | 7 | 2 | 4 | 4 | 4 | 7 | 4 | 7 | 6 | 3 | 4 | 5 | 6 | 2 | 6 | 5 | 3 | 3 | 5 | 4 | 2 | 1 | 4 | 1 | 6 | 3 | 4 | 3 |
| cga | cga | 152 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 63 | 0 | 0 | 2 | 2 | 4 | 3 | 2 | 1 | 1 | 3 | 1 | 4 | 2 | 4 | 3 | 3 | 6 | 3 | 4 | 3 | 6 | 2 | 4 | 2 | 3 | 3 | 3 | 6 | 4 | 4 | 7 | 7 | 3 | 3 | 3 | 2 | 6 | 4 | 4 | 1 | 3 | 5 | 3 | 2 | 0 | 2 | 3 | 4 | 1 | 1 |
| tcg | tcg | 145 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 64 | 3 | 1 | 1 | 4 | 6 | 0 | 0 | 2 | 3 | 2 | 2 | 5 | 0 | 6 | 2 | 8 | 1 | 4 | 1 | 7 | 5 | 5 | 5 | 2 | 1 | 2 | 1 | 7 | 4 | 4 | 4 | 4 | 0 | 4 | 2 | 3 | 5 | 4 | 2 | 0 | 7 | 2 | 0 | 2 | 2 | 4 | 0 | 3 | 2 | 1 |
Host name rsat Job started 2025-05-16.175829 Job done 2025-05-16.175830 Seconds 0.46 user 0.46 system 0.01 cuser 0 ; csystem 0