One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/results/discovered_motifs/oligos_7nt_mkv2_m4/peak-motifs_oligos_7nt_mkv2_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.175823_2025-05-16.175823_YJjJog/results/discovered_motifs/oligos_7nt_mkv2_m4/peak-motifs_oligos_7nt_mkv2_m4_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv2_m4_shift4 ; 16 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv2_m4_shift4 (oligos_7nt_mkv2_m4)
; oligos_7nt_mkv2_m4; m=0 (reference); ncol1=12; shift=4; ncol=16; ----syGCCTCCCCmv ; Alignment reference a 0 0 0 0 21 28 4 6 7 7 0 5 3 20 38 38 c 0 0 0 0 61 38 10 124 124 2 132 124 124 100 51 40 g 0 0 0 0 35 34 112 4 5 7 2 6 7 10 25 35 t 0 0 0 0 21 38 12 4 2 122 4 3 4 8 24 25

MA1961.2_rc_shift4 (PATZ1_rc)
; oligos_7nt_mkv2_m4 versus MA1961.2_rc (PATZ1_rc); m=1/15; ncol2=11; w=0; offset=0; strand=R; shift=4; score=0.65429; ----sCCCCkCCCCs- ; cor=; Ncor= a 0 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 0 c 0 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 0 g 0 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 0 t 0 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0 0

MA1653.2_shift5 (ZNF148)
; oligos_7nt_mkv2_m4 versus MA1653.2 (ZNF148); m=2/15; ncol2=10; w=0; offset=1; strand=D; shift=5; score=0.650817; -----CCCCTCCCcc- ; cor=; Ncor= a 0 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0 c 0 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0 g 0 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0 t 0 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0

MA1596.1_shift0 (ZNF460)
; oligos_7nt_mkv2_m4 versus MA1596.1 (ZNF460); m=3/15; ncol2=16; w=-4; offset=-4; strand=D; shift=0; score=0.634781; rCCTCmGCCTCCCrrG ; cor=; Ncor= a 412.0 49.0 19.0 27.0 17.0 851.0 61.0 6.0 1.0 13.0 3.0 5.0 12.0 516.0 987.0 243.0 c 131.0 1264.0 1460.0 218.0 1519.0 495.0 23.0 1588.0 1596.0 12.0 1584.0 1583.0 1533.0 110.0 175.0 158.0 g 1023.0 185.0 67.0 83.0 47.0 181.0 1493.0 7.0 9.0 17.0 15.0 15.0 27.0 930.0 421.0 1147.0 t 46.0 114.0 66.0 1284.0 29.0 85.0 35.0 11.0 6.0 1570.0 10.0 9.0 40.0 56.0 29.0 64.0

MA1630.3_rc_shift5 (ZNF281_rc)
; oligos_7nt_mkv2_m4 versus MA1630.3_rc (ZNF281_rc); m=4/15; ncol2=10; w=0; offset=1; strand=R; shift=5; score=0.631174; -----CCCCTCCCCC- ; cor=; Ncor= a 0 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 0 c 0 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 0 g 0 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 0 t 0 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0 0

MA1627.2_shift7 (Wt1)
; oligos_7nt_mkv2_m4 versus MA1627.2 (Wt1); m=5/15; ncol2=10; w=0; offset=3; strand=D; shift=7; score=0.623547; -------cCTCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 c 0 0 0 0 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 g 0 0 0 0 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 t 0 0 0 0 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0

MA0079.5_rc_shift5 (SP1_rc)
; oligos_7nt_mkv2_m4 versus MA0079.5_rc (SP1_rc); m=6/15; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.568774; -----CyCCKCCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 0 c 0 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 0 g 0 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 0 t 0 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0 0

MA2099.1_shift4 (ZNF770)
; oligos_7nt_mkv2_m4 versus MA2099.1 (ZNF770); m=7/15; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 0.5561; ----CrGCCTCm---- ; cor=; Ncor= a 0 0 0 0 292.0 3968.0 179.0 101.0 37.0 87.0 35.0 9257.0 0 0 0 0 c 0 0 0 0 12613.0 857.0 79.0 13393.0 14096.0 140.0 14154.0 3865.0 0 0 0 0 g 0 0 0 0 374.0 9119.0 13947.0 681.0 133.0 215.0 86.0 485.0 0 0 0 0 t 0 0 0 0 1052.0 387.0 126.0 156.0 65.0 13889.0 56.0 724.0 0 0 0 0

MA0685.2_rc_shift5 (SP4_rc)
; oligos_7nt_mkv2_m4 versus MA0685.2_rc (SP4_rc); m=8/15; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.542222; -----CyCCKCCCc-- ; cor=; Ncor= a 0 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 0 c 0 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 0 g 0 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 0 t 0 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0 0

MA0753.3_shift7 (ZNF740)
; oligos_7nt_mkv2_m4 versus MA0753.3 (ZNF740); m=9/15; ncol2=10; w=0; offset=3; strand=D; shift=7; score=0.519494; -------CCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 c 0 0 0 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 g 0 0 0 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 t 0 0 0 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0

MA1522.2_shift5 (MAZ)
; oligos_7nt_mkv2_m4 versus MA1522.2 (MAZ); m=10/15; ncol2=8; w=0; offset=1; strand=D; shift=5; score=0.505497; -----CCCCTCCc--- ; cor=; Ncor= a 0 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 0 c 0 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 0 g 0 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 0 t 0 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0 0

MA1965.2_shift7 (SP5)
; oligos_7nt_mkv2_m4 versus MA1965.2 (SP5); m=11/15; ncol2=6; w=0; offset=3; strand=D; shift=7; score=0.499549; -------CCTCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 0 c 0 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 0 g 0 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 0 t 0 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0 0

MA0528.3_rc_shift6 (ZNF263_rc)
; oligos_7nt_mkv2_m4 versus MA0528.3_rc (ZNF263_rc); m=12/15; ncol2=7; w=0; offset=2; strand=R; shift=6; score=0.490099; ------TCCTCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 638.0 717.0 1672.0 620.0 986.0 1192.0 1270.0 0 0 0 c 0 0 0 0 0 0 1448.0 52741.0 52875.0 163.0 53435.0 52818.0 51804.0 0 0 0 g 0 0 0 0 0 0 1758.0 2190.0 966.0 1660.0 972.0 1544.0 1659.0 0 0 0 t 0 0 0 0 0 0 52499.0 695.0 830.0 53900.0 950.0 789.0 1610.0 0 0 0

MA1723.2_rc_shift1 (PRDM9_rc)
; oligos_7nt_mkv2_m4 versus MA1723.2_rc (PRDM9_rc); m=13/15; ncol2=20; w=-3; offset=-3; strand=R; shift=1; score=0.447116; -yTkyykCCyCCcTkc ; cor=; Ncor= a 0 29.0 46.0 204.0 186.0 151.0 151.0 2.0 2.0 116.0 37.0 11.0 107.0 11.0 107.0 213.0 c 0 572.0 169.0 107.0 441.0 274.0 204.0 976.0 993.0 344.0 932.0 853.0 529.0 204.0 213.0 485.0 g 0 81.0 2.0 423.0 2.0 178.0 292.0 2.0 2.0 90.0 2.0 11.0 204.0 11.0 379.0 169.0 t 0 318.0 783.0 265.0 371.0 397.0 353.0 20.0 2.0 450.0 29.0 125.0 160.0 774.0 300.0 134.0

MA1578.2_shift10 (VEZF1)
; oligos_7nt_mkv2_m4 versus MA1578.2 (VEZF1); m=14/15; ncol2=6; w=0; offset=6; strand=D; shift=10; score=0.413222; ----------CCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 c 0 0 0 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 g 0 0 0 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0

MA1710.2_rc_shift1 (ZNF257_rc)
; oligos_7nt_mkv2_m4 versus MA1710.2_rc (ZNF257_rc); m=15/15; ncol2=10; w=-3; offset=-3; strand=R; shift=1; score=0.407295; -cyCTygCCTC----- ; cor=; Ncor= a 0 162.0 1.0 1.0 1.0 1.0 124.0 1.0 1.0 74.0 1.0 0 0 0 0 0 c 0 625.0 480.0 997.0 166.0 396.0 1.0 997.0 997.0 1.0 997.0 0 0 0 0 0 g 0 101.0 85.0 1.0 1.0 55.0 637.0 1.0 1.0 1.0 1.0 0 0 0 0 0 t 0 112.0 434.0 1.0 832.0 549.0 239.0 1.0 1.0 924.0 1.0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv2_m4_shift4 (oligos_7nt_mkv2_m4)				; oligos_7nt_mkv2_m4; m=0 (reference); ncol1=12; shift=4; ncol=16; ----syGCCTCCCCmv ; Alignment reference a 0 0 0 0 21 28 4 6 7 7 0 5 3 20 38 38 c 0 0 0 0 61 38 10 124 124 2 132 124 124 100 51 40 g 0 0 0 0 35 34 112 4 5 7 2 6 7 10 25 35 t 0 0 0 0 21 38 12 4 2 122 4 3 4 8 24 25
MA1961.2_rc_shift4 (PATZ1_rc)				; oligos_7nt_mkv2_m4 versus MA1961.2_rc (PATZ1_rc); m=1/15; ncol2=11; w=0; offset=0; strand=R; shift=4; score=0.65429; ----sCCCCkCCCCs- ; cor=; Ncor= a 0 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 0 c 0 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 0 g 0 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 0 t 0 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0 0
MA1653.2_shift5 (ZNF148)				; oligos_7nt_mkv2_m4 versus MA1653.2 (ZNF148); m=2/15; ncol2=10; w=0; offset=1; strand=D; shift=5; score=0.650817; -----CCCCTCCCcc- ; cor=; Ncor= a 0 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0 c 0 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0 g 0 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0 t 0 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0
MA1596.1_shift0 (ZNF460)				; oligos_7nt_mkv2_m4 versus MA1596.1 (ZNF460); m=3/15; ncol2=16; w=-4; offset=-4; strand=D; shift=0; score=0.634781; rCCTCmGCCTCCCrrG ; cor=; Ncor= a 412.0 49.0 19.0 27.0 17.0 851.0 61.0 6.0 1.0 13.0 3.0 5.0 12.0 516.0 987.0 243.0 c 131.0 1264.0 1460.0 218.0 1519.0 495.0 23.0 1588.0 1596.0 12.0 1584.0 1583.0 1533.0 110.0 175.0 158.0 g 1023.0 185.0 67.0 83.0 47.0 181.0 1493.0 7.0 9.0 17.0 15.0 15.0 27.0 930.0 421.0 1147.0 t 46.0 114.0 66.0 1284.0 29.0 85.0 35.0 11.0 6.0 1570.0 10.0 9.0 40.0 56.0 29.0 64.0
MA1630.3_rc_shift5 (ZNF281_rc)				; oligos_7nt_mkv2_m4 versus MA1630.3_rc (ZNF281_rc); m=4/15; ncol2=10; w=0; offset=1; strand=R; shift=5; score=0.631174; -----CCCCTCCCCC- ; cor=; Ncor= a 0 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 0 c 0 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 0 g 0 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 0 t 0 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0 0
MA1627.2_shift7 (Wt1)				; oligos_7nt_mkv2_m4 versus MA1627.2 (Wt1); m=5/15; ncol2=10; w=0; offset=3; strand=D; shift=7; score=0.623547; -------cCTCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 c 0 0 0 0 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 g 0 0 0 0 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 t 0 0 0 0 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0
MA0079.5_rc_shift5 (SP1_rc)				; oligos_7nt_mkv2_m4 versus MA0079.5_rc (SP1_rc); m=6/15; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.568774; -----CyCCKCCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 0 c 0 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 0 g 0 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 0 t 0 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0 0
MA2099.1_shift4 (ZNF770)				; oligos_7nt_mkv2_m4 versus MA2099.1 (ZNF770); m=7/15; ncol2=8; w=0; offset=0; strand=D; shift=4; score= 0.5561; ----CrGCCTCm---- ; cor=; Ncor= a 0 0 0 0 292.0 3968.0 179.0 101.0 37.0 87.0 35.0 9257.0 0 0 0 0 c 0 0 0 0 12613.0 857.0 79.0 13393.0 14096.0 140.0 14154.0 3865.0 0 0 0 0 g 0 0 0 0 374.0 9119.0 13947.0 681.0 133.0 215.0 86.0 485.0 0 0 0 0 t 0 0 0 0 1052.0 387.0 126.0 156.0 65.0 13889.0 56.0 724.0 0 0 0 0
MA0685.2_rc_shift5 (SP4_rc)				; oligos_7nt_mkv2_m4 versus MA0685.2_rc (SP4_rc); m=8/15; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.542222; -----CyCCKCCCc-- ; cor=; Ncor= a 0 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 0 c 0 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 0 g 0 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 0 t 0 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0 0
MA0753.3_shift7 (ZNF740)				; oligos_7nt_mkv2_m4 versus MA0753.3 (ZNF740); m=9/15; ncol2=10; w=0; offset=3; strand=D; shift=7; score=0.519494; -------CCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 c 0 0 0 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 g 0 0 0 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 t 0 0 0 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0
MA1522.2_shift5 (MAZ)				; oligos_7nt_mkv2_m4 versus MA1522.2 (MAZ); m=10/15; ncol2=8; w=0; offset=1; strand=D; shift=5; score=0.505497; -----CCCCTCCc--- ; cor=; Ncor= a 0 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 0 c 0 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 0 g 0 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 0 t 0 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0 0
MA1965.2_shift7 (SP5)				; oligos_7nt_mkv2_m4 versus MA1965.2 (SP5); m=11/15; ncol2=6; w=0; offset=3; strand=D; shift=7; score=0.499549; -------CCTCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 0 c 0 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 0 g 0 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 0 t 0 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0 0
MA0528.3_rc_shift6 (ZNF263_rc)				; oligos_7nt_mkv2_m4 versus MA0528.3_rc (ZNF263_rc); m=12/15; ncol2=7; w=0; offset=2; strand=R; shift=6; score=0.490099; ------TCCTCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 638.0 717.0 1672.0 620.0 986.0 1192.0 1270.0 0 0 0 c 0 0 0 0 0 0 1448.0 52741.0 52875.0 163.0 53435.0 52818.0 51804.0 0 0 0 g 0 0 0 0 0 0 1758.0 2190.0 966.0 1660.0 972.0 1544.0 1659.0 0 0 0 t 0 0 0 0 0 0 52499.0 695.0 830.0 53900.0 950.0 789.0 1610.0 0 0 0
MA1723.2_rc_shift1 (PRDM9_rc)				; oligos_7nt_mkv2_m4 versus MA1723.2_rc (PRDM9_rc); m=13/15; ncol2=20; w=-3; offset=-3; strand=R; shift=1; score=0.447116; -yTkyykCCyCCcTkc ; cor=; Ncor= a 0 29.0 46.0 204.0 186.0 151.0 151.0 2.0 2.0 116.0 37.0 11.0 107.0 11.0 107.0 213.0 c 0 572.0 169.0 107.0 441.0 274.0 204.0 976.0 993.0 344.0 932.0 853.0 529.0 204.0 213.0 485.0 g 0 81.0 2.0 423.0 2.0 178.0 292.0 2.0 2.0 90.0 2.0 11.0 204.0 11.0 379.0 169.0 t 0 318.0 783.0 265.0 371.0 397.0 353.0 20.0 2.0 450.0 29.0 125.0 160.0 774.0 300.0 134.0
MA1578.2_shift10 (VEZF1)				; oligos_7nt_mkv2_m4 versus MA1578.2 (VEZF1); m=14/15; ncol2=6; w=0; offset=6; strand=D; shift=10; score=0.413222; ----------CCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 c 0 0 0 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 g 0 0 0 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0
MA1710.2_rc_shift1 (ZNF257_rc)				; oligos_7nt_mkv2_m4 versus MA1710.2_rc (ZNF257_rc); m=15/15; ncol2=10; w=-3; offset=-3; strand=R; shift=1; score=0.407295; -cyCTygCCTC----- ; cor=; Ncor= a 0 162.0 1.0 1.0 1.0 1.0 124.0 1.0 1.0 74.0 1.0 0 0 0 0 0 c 0 625.0 480.0 997.0 166.0 396.0 1.0 997.0 997.0 1.0 997.0 0 0 0 0 0 g 0 101.0 85.0 1.0 1.0 55.0 637.0 1.0 1.0 1.0 1.0 0 0 0 0 0 t 0 112.0 434.0 1.0 832.0 549.0 239.0 1.0 1.0 924.0 1.0 0 0 0 0 0