; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	3	1	0	0	0	0	0	0	2	8
c	6	7	32	0	0	2	0	31	17	5
g	16	16	0	32	31	30	32	0	5	15
t	7	8	0	0	1	0	0	1	8	4
//
; Sites	32
>site_0
GGCGGGGCCG
>site_1
GTCGGGGCTG
>site_2
GGCGGGGCCG
>site_3
GCCGGGGCAG
>site_4
GGCGGGGCCG
>site_5
GGCGGGGCTA
>site_6
GGCGGGGCCT
>site_7
GGCGGGGCCA
>site_8
GGCGGGGCCT
>site_9
GGCGGGGCCG
>site_10
CGCGGGGCCG
>site_11
GCCGGGGCCG
>site_12
GTCGGGGCCG
>site_13
TCCGGGGCTG
>site_14
TGCGGGGCCC
>site_15
GTCGGGGCTG
>site_16
CCCGGGGCCC
>site_17
CTCGGGGCTC
>site_18
CTCGGGGCTC
>site_19
TCCGGGGCTA
>site_20
GTCGGCGCGG
>site_21
CGCGGGGCTT
>site_22
GTCGGGGTCG
>site_23
TGCGGCGCGA
>site_24
GGCGGGGCGA
>site_25
AGCGGGGCGG
>site_26
TGCGGGGCCC
>site_27
CCCGGGGCCA
>site_28
AACGGGGCCA
>site_29
ATCGTGGCAT
>site_30
TGCGGGGCGG
>site_31
TCCGGGGCCA
a	6	4	0	0	0	0	0	0	8	3
c	5	12	32	32	32	0	32	31	14	14
g	14	10	0	0	0	32	0	1	2	3
t	7	6	0	0	0	0	0	0	8	12
//
; Sites	32
>site_0
GCCCCGCCCC
>site_1
GGCCCGCCTC
>site_2
GCCCCGCCTC
>site_3
GCCCCGCCTC
>site_4
GCCCCGCCCT
>site_5
GTCCCGCCTC
>site_6
TCCCCGCCCT
>site_7
TGCCCGCCTC
>site_8
ACCCCGCCCC
>site_9
GACCCGCCAA
>site_10
GCCCCGCCCT
>site_11
GCCCCGCCCT
>site_12
GCCCCGCCCC
>site_13
GCCCCGCCCA
>site_14
TACCCGCGTT
>site_15
CGCCCGCCAA
>site_16
TGCCCGCCAG
>site_17
AGCCCGCCCC
>site_18
ACCCCGCCGT
>site_19
CGCCCGCCGG
>site_20
TTCCCGCCCC
>site_21
TGCCCGCCTT
>site_22
CTCCCGCCTC
>site_23
CTCCCGCCCG
>site_24
GCCCCGCCCC
>site_25
CTCCCGCCCC
>site_26
AACCCGCCAT
>site_27
AGCCCGCCAT
>site_28
GGCCCGCCAT
>site_29
TTCCCGCCAC
>site_30
AGCCCGCCAT
>site_31
GACCCGCCCT
; Host name	rsat
; Job started	2025-05-16.184057
; Job done	2025-05-16.184057
; Seconds	0.11
;	user	0.11
;	system	0.02
;	cuser	0
;	csystem	0
