One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/discovered_motifs/oligos_6nt_mkv2_m2/peak-motifs_oligos_6nt_mkv2_m2.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184046_2025-05-16.184046_ZEi16E/results/discovered_motifs/oligos_6nt_mkv2_m2/peak-motifs_oligos_6nt_mkv2_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv2_m2_shift2 ; 36 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv2_m2_shift2 (oligos_6nt_mkv2_m2)
; oligos_6nt_mkv2_m2; m=0 (reference); ncol1=10; shift=2; ncol=12; --gsCCCGCChy ; Alignment reference a 0 0 6 4 0 0 0 0 0 0 8 3 c 0 0 5 12 32 32 32 0 32 31 14 14 g 0 0 14 10 0 0 0 32 0 1 2 3 t 0 0 7 6 0 0 0 0 0 0 8 12

MA0516.3_rc_shift3 (SP2_rc)
; oligos_6nt_mkv2_m2 versus MA0516.3_rc (SP2_rc); m=1/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.850553; ---cCCCGCCCC ; cor=; Ncor= a 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 c 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 g 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 t 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226

MA0599.1_shift2 (KLF5)
; oligos_6nt_mkv2_m2 versus MA0599.1 (KLF5); m=2/35; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.828583; --gCCMCrCCCh ; cor=; Ncor= a 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 c 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 g 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 t 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0

MA0742.2_rc_shift3 (KLF12_rc)
; oligos_6nt_mkv2_m2 versus MA0742.2_rc (KLF12_rc); m=3/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.802794; ---CCCCGCCCC ; cor=; Ncor= a 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 c 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 g 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 t 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948

MA0740.2_rc_shift3 (KLF14_rc)
; oligos_6nt_mkv2_m2 versus MA0740.2_rc (KLF14_rc); m=4/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.795472; ---CCMCGCCCm ; cor=; Ncor= a 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 c 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 g 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 t 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158

MA1511.2_rc_shift3 (KLF10_rc)
; oligos_6nt_mkv2_m2 versus MA1511.2_rc (KLF10_rc); m=5/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.782973; ---CCMCGCCCC ; cor=; Ncor= a 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 c 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 g 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 t 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427

MA1961.2_rc_shift2 (PATZ1_rc)
; oligos_6nt_mkv2_m2 versus MA1961.2_rc (PATZ1_rc); m=6/35; ncol2=11; w=0; offset=0; strand=R; shift=2; score=0.781741; --sCCCCkCCCC ; cor=; Ncor= a 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 c 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 g 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 t 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0

MA0685.2_rc_shift3 (SP4_rc)
; oligos_6nt_mkv2_m2 versus MA0685.2_rc (SP4_rc); m=7/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.767361; ---CyCCKCCCc ; cor=; Ncor= a 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 c 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 g 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 t 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038

MA0079.5_rc_shift3 (SP1_rc)
; oligos_6nt_mkv2_m2 versus MA0079.5_rc (SP1_rc); m=8/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.763754; ---CyCCKCCCC ; cor=; Ncor= a 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 c 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 g 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 t 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485

MA1513.2_shift3 (KLF15)
; oligos_6nt_mkv2_m2 versus MA1513.2 (KLF15); m=9/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.761312; ---cCCCGCCC- ; cor=; Ncor= a 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 c 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 g 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 t 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0

MA0865.3_shift2 (E2F8)
; oligos_6nt_mkv2_m2 versus MA0865.3 (E2F8); m=10/35; ncol2=9; w=0; offset=0; strand=D; shift=2; score=0.743761; --tTCCCGCcA- ; cor=; Ncor= a 0 0 155.0 405.0 78.0 12.0 44.0 39.0 1.0 104.0 1566.0 0 c 0 0 321.0 237.0 1566.0 1566.0 1566.0 7.0 1566.0 1566.0 128.0 0 g 0 0 78.0 96.0 170.0 374.0 6.0 1566.0 26.0 537.0 95.0 0 t 0 0 1012.0 1566.0 16.0 0.0 13.0 13.0 15.0 274.0 97.0 0

MA0741.1_shift2 (KLF16)
; oligos_6nt_mkv2_m2 versus MA0741.1 (KLF16); m=11/35; ncol2=11; w=0; offset=0; strand=D; shift=2; score=0.707833; --gmCMCgCCCM ; cor=; Ncor= a 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 c 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 g 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 t 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0

MA0746.3_shift2 (SP3)
; oligos_6nt_mkv2_m2 versus MA0746.3 (SP3); m=12/35; ncol2=11; w=0; offset=0; strand=D; shift=2; score=0.705257; --rCCACGCCCm ; cor=; Ncor= a 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 c 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 g 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 t 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0

MA0471.3_rc_shift2 (E2F6_rc)
; oligos_6nt_mkv2_m2 versus MA0471.3_rc (E2F6_rc); m=13/35; ncol2=8; w=0; offset=0; strand=R; shift=2; score=0.689485; --TTCCCGCC-- ; cor=; Ncor= a 0 0 757.0 268.0 296.0 353.0 813.0 2125.0 205.0 453.0 0 0 c 0 0 5021.0 2322.0 31614.0 31973.0 30573.0 693.0 31790.0 29387.0 0 0 g 0 0 1595.0 1171.0 834.0 434.0 539.0 26424.0 837.0 1148.0 0 0 t 0 0 25725.0 29337.0 354.0 338.0 1173.0 3856.0 266.0 2110.0 0 0

MA1959.2_rc_shift3 (KLF7_rc)
; oligos_6nt_mkv2_m2 versus MA1959.2_rc (KLF7_rc); m=14/35; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.680604; ---CcMCGCCC- ; cor=; Ncor= a 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 c 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 g 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 t 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0

MA1564.2_shift3 (SP9)
; oligos_6nt_mkv2_m2 versus MA1564.2 (SP9); m=15/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.671594; ---cCmCGCCCm ; cor=; Ncor= a 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 c 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 g 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 t 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0

MA0493.3_rc_shift3 (KLF1_rc)
; oligos_6nt_mkv2_m2 versus MA0493.3_rc (KLF1_rc); m=16/35; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.665761; ---CCmCrCCC- ; cor=; Ncor= a 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 c 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 g 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 t 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0

MA1122.2_rc_shift2 (TFDP1_rc)
; oligos_6nt_mkv2_m2 versus MA1122.2_rc (TFDP1_rc); m=17/35; ncol2=8; w=0; offset=0; strand=R; shift=2; score=0.650422; --TTCCCGCs-- ; cor=; Ncor= a 0 0 55.0 30.0 29.0 26.0 7.0 71.0 26.0 120.0 0 0 c 0 0 137.0 98.0 1919.0 1865.0 1932.0 22.0 1862.0 940.0 0 0 g 0 0 170.0 24.0 32.0 80.0 54.0 1886.0 71.0 684.0 0 0 t 0 0 1645.0 1855.0 27.0 36.0 14.0 28.0 48.0 263.0 0 0

MA1517.2_shift3 (KLF6)
; oligos_6nt_mkv2_m2 versus MA1517.2 (KLF6); m=18/35; ncol2=9; w=0; offset=1; strand=D; shift=3; score=0.648773; ---cCACRCCCm ; cor=; Ncor= a 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 c 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 g 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 t 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0

MA1515.2_shift3 (KLF2)
; oligos_6nt_mkv2_m2 versus MA1515.2 (KLF2); m=19/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.640334; ---CCmCrCCC- ; cor=; Ncor= a 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 c 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 g 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 t 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0

MA1630.3_rc_shift3 (ZNF281_rc)
; oligos_6nt_mkv2_m2 versus MA1630.3_rc (ZNF281_rc); m=20/35; ncol2=10; w=0; offset=1; strand=R; shift=3; score=0.616553; ---CCCCTCCCC ; cor=; Ncor= a 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 c 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 g 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 t 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0

MA1653.2_shift3 (ZNF148)
; oligos_6nt_mkv2_m2 versus MA1653.2 (ZNF148); m=21/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.610477; ---CCCCTCCCc ; cor=; Ncor= a 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 c 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 g 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 t 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0

MA1512.2_shift3 (KLF11)
; oligos_6nt_mkv2_m2 versus MA1512.2 (KLF11); m=22/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.610277; ---cCACGCCCm ; cor=; Ncor= a 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 c 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 g 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 t 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0

MA1516.2_shift1 (KLF3)
; oligos_6nt_mkv2_m2 versus MA1516.2 (KLF3); m=23/35; ncol2=10; w=-1; offset=-1; strand=D; shift=1; score=0.607266; -grCCrCGCCC- ; cor=; Ncor= a 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 c 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 g 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 t 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0

MA0039.5_shift3 (KLF4)
; oligos_6nt_mkv2_m2 versus MA0039.5 (KLF4); m=24/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.59962; ---CCCCACCC- ; cor=; Ncor= a 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 c 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 g 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 t 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0

MA0748.3_rc_shift5 (YY2_rc)
; oligos_6nt_mkv2_m2 versus MA0748.3_rc (YY2_rc); m=25/35; ncol2=7; w=0; offset=3; strand=R; shift=5; score=0.593955; -----CCGCCAT ; cor=; Ncor= a 0 0 0 0 0 303.0 79.0 186.0 101.0 27.0 5248.0 36.0 c 0 0 0 0 0 4474.0 5231.0 25.0 5376.0 5509.0 125.0 359.0 g 0 0 0 0 0 516.0 330.0 5384.0 101.0 120.0 273.0 46.0 t 0 0 0 0 0 411.0 64.0 109.0 126.0 48.0 58.0 5263.0

MA1522.2_shift3 (MAZ)
; oligos_6nt_mkv2_m2 versus MA1522.2 (MAZ); m=26/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.591397; ---CCCCTCCc- ; cor=; Ncor= a 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 c 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 g 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 t 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0

MA2328.1_shift4 (ZBED4)
; oligos_6nt_mkv2_m2 versus MA2328.1 (ZBED4); m=27/35; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.565818; ----CcCGCyCC ; cor=; Ncor= a 0 0 0 0 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 c 0 0 0 0 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 g 0 0 0 0 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 t 0 0 0 0 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0

MA2341.1_shift3 (FEZF2)
; oligos_6nt_mkv2_m2 versus MA2341.1 (FEZF2); m=28/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.562868; ---CCCAGCCT- ; cor=; Ncor= a 0 0 0 17.0 5.0 4.0 231.0 6.0 8.0 7.0 14.0 0 c 0 0 0 202.0 206.0 258.0 15.0 8.0 224.0 247.0 10.0 0 g 0 0 0 10.0 9.0 0.0 14.0 251.0 28.0 2.0 8.0 0 t 0 0 0 36.0 45.0 3.0 5.0 0.0 5.0 9.0 233.0 0

MA0747.2_shift3 (SP8)
; oligos_6nt_mkv2_m2 versus MA0747.2 (SP8); m=29/35; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.545156; ---mCACgCCCm ; cor=; Ncor= a 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 c 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 g 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 t 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0

MA0758.1_shift0 (E2F7)
; oligos_6nt_mkv2_m2 versus MA0758.1 (E2F7); m=30/35; ncol2=14; w=-2; offset=-2; strand=D; shift=0; score=0.50767; tTTTCCCGCCAA ; cor=; Ncor= a 222.0 38.0 0.0 0.0 0.0 0.0 0.0 2.0 0.0 0.0 912.0 930.0 c 72.0 7.0 3.0 1.0 960.0 961.0 965.0 1.0 986.0 977.0 0.0 1.0 g 182.0 18.0 0.0 0.0 2.0 10.0 0.0 995.0 0.0 17.0 0.0 3.0 t 577.0 891.0 963.0 957.0 0.0 0.0 0.0 0.0 0.0 1.0 5.0 6.0

MA0753.3_shift4 (ZNF740)
; oligos_6nt_mkv2_m2 versus MA0753.3 (ZNF740); m=31/35; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.479537; ----CCCCCCCC ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0

MA1578.2_shift4 (VEZF1)
; oligos_6nt_mkv2_m2 versus MA1578.2 (VEZF1); m=32/35; ncol2=6; w=0; offset=2; strand=D; shift=4; score=0.454931; ----CCCCCC-- ; cor=; Ncor= a 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 c 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 g 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 t 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0

MA1965.2_shift5 (SP5)
; oligos_6nt_mkv2_m2 versus MA1965.2 (SP5); m=33/35; ncol2=6; w=0; offset=3; strand=D; shift=5; score=0.425085; -----CCTCCC- ; cor=; Ncor= a 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 c 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 g 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 t 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0

MA0657.2_shift1 (KLF13)
; oligos_6nt_mkv2_m2 versus MA0657.2 (KLF13); m=34/35; ncol2=17; w=-1; offset=-1; strand=D; shift=1; score=0.421152; -tRmCACGCCCC ; cor=; Ncor= a 0 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 c 0 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 g 0 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 t 0 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0

MA0162.5_shift5 (EGR1)
; oligos_6nt_mkv2_m2 versus MA0162.5 (EGR1); m=35/35; ncol2=10; w=0; offset=3; strand=D; shift=5; score=0.405046; -----mCGCCCA ; cor=; Ncor= a 0 0 0 0 0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 c 0 0 0 0 0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 g 0 0 0 0 0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 t 0 0 0 0 0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv2_m2_shift2 (oligos_6nt_mkv2_m2)				; oligos_6nt_mkv2_m2; m=0 (reference); ncol1=10; shift=2; ncol=12; --gsCCCGCChy ; Alignment reference a 0 0 6 4 0 0 0 0 0 0 8 3 c 0 0 5 12 32 32 32 0 32 31 14 14 g 0 0 14 10 0 0 0 32 0 1 2 3 t 0 0 7 6 0 0 0 0 0 0 8 12
MA0516.3_rc_shift3 (SP2_rc)				; oligos_6nt_mkv2_m2 versus MA0516.3_rc (SP2_rc); m=1/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.850553; ---cCCCGCCCC ; cor=; Ncor= a 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 c 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 g 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 t 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226
MA0599.1_shift2 (KLF5)				; oligos_6nt_mkv2_m2 versus MA0599.1 (KLF5); m=2/35; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.828583; --gCCMCrCCCh ; cor=; Ncor= a 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 c 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 g 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 t 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0
MA0742.2_rc_shift3 (KLF12_rc)				; oligos_6nt_mkv2_m2 versus MA0742.2_rc (KLF12_rc); m=3/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.802794; ---CCCCGCCCC ; cor=; Ncor= a 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 c 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 g 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 t 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948
MA0740.2_rc_shift3 (KLF14_rc)				; oligos_6nt_mkv2_m2 versus MA0740.2_rc (KLF14_rc); m=4/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.795472; ---CCMCGCCCm ; cor=; Ncor= a 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 c 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 g 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 t 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158
MA1511.2_rc_shift3 (KLF10_rc)				; oligos_6nt_mkv2_m2 versus MA1511.2_rc (KLF10_rc); m=5/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.782973; ---CCMCGCCCC ; cor=; Ncor= a 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 c 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 g 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 t 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427
MA1961.2_rc_shift2 (PATZ1_rc)				; oligos_6nt_mkv2_m2 versus MA1961.2_rc (PATZ1_rc); m=6/35; ncol2=11; w=0; offset=0; strand=R; shift=2; score=0.781741; --sCCCCkCCCC ; cor=; Ncor= a 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 c 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 g 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 t 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0
MA0685.2_rc_shift3 (SP4_rc)				; oligos_6nt_mkv2_m2 versus MA0685.2_rc (SP4_rc); m=7/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.767361; ---CyCCKCCCc ; cor=; Ncor= a 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 c 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 g 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 t 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038
MA0079.5_rc_shift3 (SP1_rc)				; oligos_6nt_mkv2_m2 versus MA0079.5_rc (SP1_rc); m=8/35; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.763754; ---CyCCKCCCC ; cor=; Ncor= a 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 c 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 g 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 t 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485
MA1513.2_shift3 (KLF15)				; oligos_6nt_mkv2_m2 versus MA1513.2 (KLF15); m=9/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.761312; ---cCCCGCCC- ; cor=; Ncor= a 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 c 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 g 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 t 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0
MA0865.3_shift2 (E2F8)				; oligos_6nt_mkv2_m2 versus MA0865.3 (E2F8); m=10/35; ncol2=9; w=0; offset=0; strand=D; shift=2; score=0.743761; --tTCCCGCcA- ; cor=; Ncor= a 0 0 155.0 405.0 78.0 12.0 44.0 39.0 1.0 104.0 1566.0 0 c 0 0 321.0 237.0 1566.0 1566.0 1566.0 7.0 1566.0 1566.0 128.0 0 g 0 0 78.0 96.0 170.0 374.0 6.0 1566.0 26.0 537.0 95.0 0 t 0 0 1012.0 1566.0 16.0 0.0 13.0 13.0 15.0 274.0 97.0 0
MA0741.1_shift2 (KLF16)				; oligos_6nt_mkv2_m2 versus MA0741.1 (KLF16); m=11/35; ncol2=11; w=0; offset=0; strand=D; shift=2; score=0.707833; --gmCMCgCCCM ; cor=; Ncor= a 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 c 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 g 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 t 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0
MA0746.3_shift2 (SP3)				; oligos_6nt_mkv2_m2 versus MA0746.3 (SP3); m=12/35; ncol2=11; w=0; offset=0; strand=D; shift=2; score=0.705257; --rCCACGCCCm ; cor=; Ncor= a 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 c 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 g 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 t 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0
MA0471.3_rc_shift2 (E2F6_rc)				; oligos_6nt_mkv2_m2 versus MA0471.3_rc (E2F6_rc); m=13/35; ncol2=8; w=0; offset=0; strand=R; shift=2; score=0.689485; --TTCCCGCC-- ; cor=; Ncor= a 0 0 757.0 268.0 296.0 353.0 813.0 2125.0 205.0 453.0 0 0 c 0 0 5021.0 2322.0 31614.0 31973.0 30573.0 693.0 31790.0 29387.0 0 0 g 0 0 1595.0 1171.0 834.0 434.0 539.0 26424.0 837.0 1148.0 0 0 t 0 0 25725.0 29337.0 354.0 338.0 1173.0 3856.0 266.0 2110.0 0 0
MA1959.2_rc_shift3 (KLF7_rc)				; oligos_6nt_mkv2_m2 versus MA1959.2_rc (KLF7_rc); m=14/35; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.680604; ---CcMCGCCC- ; cor=; Ncor= a 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 c 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 g 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 t 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0
MA1564.2_shift3 (SP9)				; oligos_6nt_mkv2_m2 versus MA1564.2 (SP9); m=15/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.671594; ---cCmCGCCCm ; cor=; Ncor= a 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 c 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 g 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 t 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0
MA0493.3_rc_shift3 (KLF1_rc)				; oligos_6nt_mkv2_m2 versus MA0493.3_rc (KLF1_rc); m=16/35; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.665761; ---CCmCrCCC- ; cor=; Ncor= a 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 c 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 g 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 t 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0
MA1122.2_rc_shift2 (TFDP1_rc)				; oligos_6nt_mkv2_m2 versus MA1122.2_rc (TFDP1_rc); m=17/35; ncol2=8; w=0; offset=0; strand=R; shift=2; score=0.650422; --TTCCCGCs-- ; cor=; Ncor= a 0 0 55.0 30.0 29.0 26.0 7.0 71.0 26.0 120.0 0 0 c 0 0 137.0 98.0 1919.0 1865.0 1932.0 22.0 1862.0 940.0 0 0 g 0 0 170.0 24.0 32.0 80.0 54.0 1886.0 71.0 684.0 0 0 t 0 0 1645.0 1855.0 27.0 36.0 14.0 28.0 48.0 263.0 0 0
MA1517.2_shift3 (KLF6)				; oligos_6nt_mkv2_m2 versus MA1517.2 (KLF6); m=18/35; ncol2=9; w=0; offset=1; strand=D; shift=3; score=0.648773; ---cCACRCCCm ; cor=; Ncor= a 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 c 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 g 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 t 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0
MA1515.2_shift3 (KLF2)				; oligos_6nt_mkv2_m2 versus MA1515.2 (KLF2); m=19/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.640334; ---CCmCrCCC- ; cor=; Ncor= a 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 c 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 g 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 t 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0
MA1630.3_rc_shift3 (ZNF281_rc)				; oligos_6nt_mkv2_m2 versus MA1630.3_rc (ZNF281_rc); m=20/35; ncol2=10; w=0; offset=1; strand=R; shift=3; score=0.616553; ---CCCCTCCCC ; cor=; Ncor= a 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 c 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 g 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 t 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0
MA1653.2_shift3 (ZNF148)				; oligos_6nt_mkv2_m2 versus MA1653.2 (ZNF148); m=21/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.610477; ---CCCCTCCCc ; cor=; Ncor= a 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 c 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 g 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 t 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0
MA1512.2_shift3 (KLF11)				; oligos_6nt_mkv2_m2 versus MA1512.2 (KLF11); m=22/35; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.610277; ---cCACGCCCm ; cor=; Ncor= a 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 c 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 g 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 t 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0
MA1516.2_shift1 (KLF3)				; oligos_6nt_mkv2_m2 versus MA1516.2 (KLF3); m=23/35; ncol2=10; w=-1; offset=-1; strand=D; shift=1; score=0.607266; -grCCrCGCCC- ; cor=; Ncor= a 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 c 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 g 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 t 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0
MA0039.5_shift3 (KLF4)				; oligos_6nt_mkv2_m2 versus MA0039.5 (KLF4); m=24/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.59962; ---CCCCACCC- ; cor=; Ncor= a 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 c 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 g 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 t 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0
MA0748.3_rc_shift5 (YY2_rc)				; oligos_6nt_mkv2_m2 versus MA0748.3_rc (YY2_rc); m=25/35; ncol2=7; w=0; offset=3; strand=R; shift=5; score=0.593955; -----CCGCCAT ; cor=; Ncor= a 0 0 0 0 0 303.0 79.0 186.0 101.0 27.0 5248.0 36.0 c 0 0 0 0 0 4474.0 5231.0 25.0 5376.0 5509.0 125.0 359.0 g 0 0 0 0 0 516.0 330.0 5384.0 101.0 120.0 273.0 46.0 t 0 0 0 0 0 411.0 64.0 109.0 126.0 48.0 58.0 5263.0
MA1522.2_shift3 (MAZ)				; oligos_6nt_mkv2_m2 versus MA1522.2 (MAZ); m=26/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.591397; ---CCCCTCCc- ; cor=; Ncor= a 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 c 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 g 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 t 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0
MA2328.1_shift4 (ZBED4)				; oligos_6nt_mkv2_m2 versus MA2328.1 (ZBED4); m=27/35; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.565818; ----CcCGCyCC ; cor=; Ncor= a 0 0 0 0 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 c 0 0 0 0 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 g 0 0 0 0 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 t 0 0 0 0 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0
MA2341.1_shift3 (FEZF2)				; oligos_6nt_mkv2_m2 versus MA2341.1 (FEZF2); m=28/35; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.562868; ---CCCAGCCT- ; cor=; Ncor= a 0 0 0 17.0 5.0 4.0 231.0 6.0 8.0 7.0 14.0 0 c 0 0 0 202.0 206.0 258.0 15.0 8.0 224.0 247.0 10.0 0 g 0 0 0 10.0 9.0 0.0 14.0 251.0 28.0 2.0 8.0 0 t 0 0 0 36.0 45.0 3.0 5.0 0.0 5.0 9.0 233.0 0
MA0747.2_shift3 (SP8)				; oligos_6nt_mkv2_m2 versus MA0747.2 (SP8); m=29/35; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.545156; ---mCACgCCCm ; cor=; Ncor= a 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 c 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 g 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 t 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0
MA0758.1_shift0 (E2F7)				; oligos_6nt_mkv2_m2 versus MA0758.1 (E2F7); m=30/35; ncol2=14; w=-2; offset=-2; strand=D; shift=0; score=0.50767; tTTTCCCGCCAA ; cor=; Ncor= a 222.0 38.0 0.0 0.0 0.0 0.0 0.0 2.0 0.0 0.0 912.0 930.0 c 72.0 7.0 3.0 1.0 960.0 961.0 965.0 1.0 986.0 977.0 0.0 1.0 g 182.0 18.0 0.0 0.0 2.0 10.0 0.0 995.0 0.0 17.0 0.0 3.0 t 577.0 891.0 963.0 957.0 0.0 0.0 0.0 0.0 0.0 1.0 5.0 6.0
MA0753.3_shift4 (ZNF740)				; oligos_6nt_mkv2_m2 versus MA0753.3 (ZNF740); m=31/35; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.479537; ----CCCCCCCC ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0
MA1578.2_shift4 (VEZF1)				; oligos_6nt_mkv2_m2 versus MA1578.2 (VEZF1); m=32/35; ncol2=6; w=0; offset=2; strand=D; shift=4; score=0.454931; ----CCCCCC-- ; cor=; Ncor= a 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 c 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 g 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 t 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0
MA1965.2_shift5 (SP5)				; oligos_6nt_mkv2_m2 versus MA1965.2 (SP5); m=33/35; ncol2=6; w=0; offset=3; strand=D; shift=5; score=0.425085; -----CCTCCC- ; cor=; Ncor= a 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 c 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 g 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 t 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0
MA0657.2_shift1 (KLF13)				; oligos_6nt_mkv2_m2 versus MA0657.2 (KLF13); m=34/35; ncol2=17; w=-1; offset=-1; strand=D; shift=1; score=0.421152; -tRmCACGCCCC ; cor=; Ncor= a 0 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 c 0 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 g 0 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 t 0 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0
MA0162.5_shift5 (EGR1)				; oligos_6nt_mkv2_m2 versus MA0162.5 (EGR1); m=35/35; ncol2=10; w=0; offset=3; strand=D; shift=5; score=0.405046; -----mCGCCCA ; cor=; Ncor= a 0 0 0 0 0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 c 0 0 0 0 0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 g 0 0 0 0 0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 t 0 0 0 0 0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0