One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184201_2025-05-16.184201_aBOVlS/results/discovered_motifs/oligos_7nt_mkv2_m3/peak-motifs_oligos_7nt_mkv2_m3.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184201_2025-05-16.184201_aBOVlS/results/discovered_motifs/oligos_7nt_mkv2_m3/peak-motifs_oligos_7nt_mkv2_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv2_m3_shift2 ; 33 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv2_m3_shift2 (oligos_7nt_mkv2_m3)
; oligos_7nt_mkv2_m3; m=0 (reference); ncol1=12; shift=2; ncol=14; --ccCCCCACCCcs ; Alignment reference a 0 0 26 31 0 9 5 4 108 4 2 11 35 19 c 0 0 55 43 133 127 133 133 8 132 131 102 57 52 g 0 0 34 35 7 6 3 3 16 7 6 21 21 46 t 0 0 30 36 5 3 4 5 13 2 6 11 32 28

MA1961.2_rc_shift3 (PATZ1_rc)
; oligos_7nt_mkv2_m3 versus MA1961.2_rc (PATZ1_rc); m=1/32; ncol2=11; w=0; offset=1; strand=R; shift=3; score=0.826243; ---sCCCCkCCCCs ; cor=; Ncor= a 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 c 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 g 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 t 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0

MA0599.1_shift3 (KLF5)
; oligos_7nt_mkv2_m3 versus MA0599.1 (KLF5); m=2/32; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.77174; ---gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0

MA1653.2_shift4 (ZNF148)
; oligos_7nt_mkv2_m3 versus MA1653.2 (ZNF148); m=3/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.710226; ----CCCCTCCCcc ; cor=; Ncor= a 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 c 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 g 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 t 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0

MA1107.3_shift3 (KLF9)
; oligos_7nt_mkv2_m3 versus MA1107.3 (KLF9); m=4/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.688515; ---gCCACACCCAC ; cor=; Ncor= a 0 0 0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 c 0 0 0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 g 0 0 0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 t 0 0 0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0

MA0741.1_shift3 (KLF16)
; oligos_7nt_mkv2_m3 versus MA0741.1 (KLF16); m=5/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.685959; ---gmCMCgCCCMC ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0

MA1630.3_rc_shift4 (ZNF281_rc)
; oligos_7nt_mkv2_m3 versus MA1630.3_rc (ZNF281_rc); m=6/32; ncol2=10; w=0; offset=2; strand=R; shift=4; score=0.684942; ----CCCCTCCCCC ; cor=; Ncor= a 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 c 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 g 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 t 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0

MA0753.3_shift4 (ZNF740)
; oligos_7nt_mkv2_m3 versus MA0753.3 (ZNF740); m=7/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.676299; ----CCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0

MA0746.3_shift3 (SP3)
; oligos_7nt_mkv2_m3 versus MA0746.3 (SP3); m=8/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.660427; ---rCCACGCCCmC ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0

MA0039.5_shift4 (KLF4)
; oligos_7nt_mkv2_m3 versus MA0039.5 (KLF4); m=9/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.658739; ----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0

MA1511.2_rc_shift4 (KLF10_rc)
; oligos_7nt_mkv2_m3 versus MA1511.2_rc (KLF10_rc); m=10/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.647408; ----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0

MA0685.2_rc_shift4 (SP4_rc)
; oligos_7nt_mkv2_m3 versus MA0685.2_rc (SP4_rc); m=11/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.645735; ----CyCCKCCCc- ; cor=; Ncor= a 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 c 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 g 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 t 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0

MA0740.2_rc_shift4 (KLF14_rc)
; oligos_7nt_mkv2_m3 versus MA0740.2_rc (KLF14_rc); m=12/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.638374; ----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0

MA0742.2_rc_shift4 (KLF12_rc)
; oligos_7nt_mkv2_m3 versus MA0742.2_rc (KLF12_rc); m=13/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.630805; ----CCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 0 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 0 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 0 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948 0

MA0516.3_rc_shift4 (SP2_rc)
; oligos_7nt_mkv2_m3 versus MA0516.3_rc (SP2_rc); m=14/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.622945; ----cCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 c 0 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 g 0 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 t 0 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0

MA1564.2_shift4 (SP9)
; oligos_7nt_mkv2_m3 versus MA1564.2 (SP9); m=15/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.622863; ----cCmCGCCCmc ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0

MA0079.5_rc_shift4 (SP1_rc)
; oligos_7nt_mkv2_m3 versus MA0079.5_rc (SP1_rc); m=16/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.621742; ----CyCCKCCCC- ; cor=; Ncor= a 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 c 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 g 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 t 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0

MA0493.3_rc_shift4 (KLF1_rc)
; oligos_7nt_mkv2_m3 versus MA0493.3_rc (KLF1_rc); m=17/32; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.619521; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0

MA1512.2_shift4 (KLF11)
; oligos_7nt_mkv2_m3 versus MA1512.2 (KLF11); m=18/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.594504; ----cCACGCCCmC ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0

MA1959.2_rc_shift4 (KLF7_rc)
; oligos_7nt_mkv2_m3 versus MA1959.2_rc (KLF7_rc); m=19/32; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.582006; ----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0

MA1522.2_shift4 (MAZ)
; oligos_7nt_mkv2_m3 versus MA1522.2 (MAZ); m=20/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.566925; ----CCCCTCCc-- ; cor=; Ncor= a 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 c 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 g 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 t 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0

MA1515.2_shift4 (KLF2)
; oligos_7nt_mkv2_m3 versus MA1515.2 (KLF2); m=21/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.564037; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0

MA1517.2_shift4 (KLF6)
; oligos_7nt_mkv2_m3 versus MA1517.2 (KLF6); m=22/32; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.55775; ----cCACRCCCm- ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0

MA0747.2_shift4 (SP8)
; oligos_7nt_mkv2_m3 versus MA0747.2 (SP8); m=23/32; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.555702; ----mCACgCCCmC ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0

MA1513.2_shift4 (KLF15)
; oligos_7nt_mkv2_m3 versus MA1513.2 (KLF15); m=24/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.550235; ----cCCCGCCC-- ; cor=; Ncor= a 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 c 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 g 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 t 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0

MA1627.2_shift0 (Wt1)
; oligos_7nt_mkv2_m3 versus MA1627.2 (Wt1); m=25/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.471394; cCTCCCCCAC---- ; cor=; Ncor= a 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 0 0 0 0 c 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 0 0 0 0 g 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 0 0 0 0 t 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 0 0 0 0

MA1578.2_shift2 (VEZF1)
; oligos_7nt_mkv2_m3 versus MA1578.2 (VEZF1); m=26/32; ncol2=6; w=0; offset=0; strand=D; shift=2; score=0.443751; --CCCCCC------ ; cor=; Ncor= a 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 0 0 0 0 c 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 0 0 0 0 g 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0 0 t 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0 0 0 0 0

MA1615.2_rc_shift1 (Plagl1_rc)
; oligos_7nt_mkv2_m3 versus MA1615.2_rc (Plagl1_rc); m=27/32; ncol2=8; w=-1; offset=-1; strand=R; shift=1; score=0.441894; -TGGCCCCa----- ; cor=; Ncor= a 0 371.0 398.0 321.0 142.0 183.0 323.0 118.0 9425.0 0 0 0 0 0 c 0 1032.0 422.0 313.0 13495.0 13517.0 12261.0 13595.0 1338.0 0 0 0 0 0 g 0 686.0 13152.0 12737.0 336.0 266.0 356.0 243.0 1471.0 0 0 0 0 0 t 0 12064.0 181.0 782.0 180.0 187.0 1213.0 197.0 1919.0 0 0 0 0 0

MA0056.3_shift1 (MZF1)
; oligos_7nt_mkv2_m3 versus MA0056.3 (MZF1); m=28/32; ncol2=8; w=-1; offset=-1; strand=D; shift=1; score=0.441538; -AATCCCCA----- ; cor=; Ncor= a 0 5855.0 7149.0 106.0 100.0 135.0 111.0 117.0 6036.0 0 0 0 0 0 c 0 1016.0 426.0 56.0 7949.0 7939.0 7919.0 7673.0 611.0 0 0 0 0 0 g 0 999.0 385.0 98.0 100.0 54.0 58.0 83.0 484.0 0 0 0 0 0 t 0 372.0 282.0 7982.0 93.0 114.0 154.0 369.0 1111.0 0 0 0 0 0

MA1715.1_shift4 (ZNF707)
; oligos_7nt_mkv2_m3 versus MA1715.1 (ZNF707); m=29/32; ncol2=15; w=0; offset=2; strand=D; shift=4; score=0.42175; ----CCCCACTYCT ; cor=; Ncor= a 0 0 0 0 37.0 37.0 12.0 41.0 1109.0 9.0 5.0 4.0 12.0 17.0 c 0 0 0 0 960.0 1057.0 1109.0 1044.0 5.0 1111.0 11.0 821.0 1079.0 83.0 g 0 0 0 0 34.0 31.0 9.0 8.0 17.0 5.0 2.0 11.0 9.0 5.0 t 0 0 0 0 126.0 32.0 27.0 64.0 26.0 32.0 1139.0 321.0 57.0 1052.0

MA0595.1_shift0 (SREBF1)
; oligos_7nt_mkv2_m3 versus MA0595.1 (SREBF1); m=30/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.411654; rTCACcCCAy---- ; cor=; Ncor= a 28.0 0.0 0.0 58.0 0.0 6.0 0.0 2.0 58.0 0.0 0 0 0 0 c 14.0 0.0 58.0 0.0 51.0 38.0 44.0 45.0 0.0 26.0 0 0 0 0 g 16.0 0.0 0.0 0.0 7.0 13.0 0.0 11.0 0.0 7.0 0 0 0 0 t 0.0 58.0 0.0 0.0 0.0 1.0 14.0 0.0 0.0 25.0 0 0 0 0

MA2328.1_shift0 (ZBED4)
; oligos_7nt_mkv2_m3 versus MA2328.1 (ZBED4); m=31/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.405799; CcCGCyCCGC---- ; cor=; Ncor= a 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 22.0 19.0 0 0 0 0 c 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 19.0 589.0 0 0 0 0 g 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 580.0 35.0 0 0 0 0 t 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0 39.0 17.0 0 0 0 0

MA1965.2_shift6 (SP5)
; oligos_7nt_mkv2_m3 versus MA1965.2 (SP5); m=32/32; ncol2=6; w=0; offset=4; strand=D; shift=6; score=0.403981; ------CCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 c 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 g 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 t 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv2_m3_shift2 (oligos_7nt_mkv2_m3)				; oligos_7nt_mkv2_m3; m=0 (reference); ncol1=12; shift=2; ncol=14; --ccCCCCACCCcs ; Alignment reference a 0 0 26 31 0 9 5 4 108 4 2 11 35 19 c 0 0 55 43 133 127 133 133 8 132 131 102 57 52 g 0 0 34 35 7 6 3 3 16 7 6 21 21 46 t 0 0 30 36 5 3 4 5 13 2 6 11 32 28
MA1961.2_rc_shift3 (PATZ1_rc)				; oligos_7nt_mkv2_m3 versus MA1961.2_rc (PATZ1_rc); m=1/32; ncol2=11; w=0; offset=1; strand=R; shift=3; score=0.826243; ---sCCCCkCCCCs ; cor=; Ncor= a 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 c 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 g 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 t 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0
MA0599.1_shift3 (KLF5)				; oligos_7nt_mkv2_m3 versus MA0599.1 (KLF5); m=2/32; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.77174; ---gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0
MA1653.2_shift4 (ZNF148)				; oligos_7nt_mkv2_m3 versus MA1653.2 (ZNF148); m=3/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.710226; ----CCCCTCCCcc ; cor=; Ncor= a 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 c 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 g 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 t 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0
MA1107.3_shift3 (KLF9)				; oligos_7nt_mkv2_m3 versus MA1107.3 (KLF9); m=4/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.688515; ---gCCACACCCAC ; cor=; Ncor= a 0 0 0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 c 0 0 0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 g 0 0 0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 t 0 0 0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0
MA0741.1_shift3 (KLF16)				; oligos_7nt_mkv2_m3 versus MA0741.1 (KLF16); m=5/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.685959; ---gmCMCgCCCMC ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0
MA1630.3_rc_shift4 (ZNF281_rc)				; oligos_7nt_mkv2_m3 versus MA1630.3_rc (ZNF281_rc); m=6/32; ncol2=10; w=0; offset=2; strand=R; shift=4; score=0.684942; ----CCCCTCCCCC ; cor=; Ncor= a 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 c 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 g 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 t 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0
MA0753.3_shift4 (ZNF740)				; oligos_7nt_mkv2_m3 versus MA0753.3 (ZNF740); m=7/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.676299; ----CCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 c 0 0 0 0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 g 0 0 0 0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 t 0 0 0 0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0
MA0746.3_shift3 (SP3)				; oligos_7nt_mkv2_m3 versus MA0746.3 (SP3); m=8/32; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.660427; ---rCCACGCCCmC ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0
MA0039.5_shift4 (KLF4)				; oligos_7nt_mkv2_m3 versus MA0039.5 (KLF4); m=9/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.658739; ----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0
MA1511.2_rc_shift4 (KLF10_rc)				; oligos_7nt_mkv2_m3 versus MA1511.2_rc (KLF10_rc); m=10/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.647408; ----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0
MA0685.2_rc_shift4 (SP4_rc)				; oligos_7nt_mkv2_m3 versus MA0685.2_rc (SP4_rc); m=11/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.645735; ----CyCCKCCCc- ; cor=; Ncor= a 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 c 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 g 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 t 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0
MA0740.2_rc_shift4 (KLF14_rc)				; oligos_7nt_mkv2_m3 versus MA0740.2_rc (KLF14_rc); m=12/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.638374; ----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0
MA0742.2_rc_shift4 (KLF12_rc)				; oligos_7nt_mkv2_m3 versus MA0742.2_rc (KLF12_rc); m=13/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.630805; ----CCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 0 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 0 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 0 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948 0
MA0516.3_rc_shift4 (SP2_rc)				; oligos_7nt_mkv2_m3 versus MA0516.3_rc (SP2_rc); m=14/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.622945; ----cCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 c 0 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 g 0 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 t 0 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0
MA1564.2_shift4 (SP9)				; oligos_7nt_mkv2_m3 versus MA1564.2 (SP9); m=15/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.622863; ----cCmCGCCCmc ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0
MA0079.5_rc_shift4 (SP1_rc)				; oligos_7nt_mkv2_m3 versus MA0079.5_rc (SP1_rc); m=16/32; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.621742; ----CyCCKCCCC- ; cor=; Ncor= a 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 c 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 g 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 t 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0
MA0493.3_rc_shift4 (KLF1_rc)				; oligos_7nt_mkv2_m3 versus MA0493.3_rc (KLF1_rc); m=17/32; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.619521; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0
MA1512.2_shift4 (KLF11)				; oligos_7nt_mkv2_m3 versus MA1512.2 (KLF11); m=18/32; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.594504; ----cCACGCCCmC ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0
MA1959.2_rc_shift4 (KLF7_rc)				; oligos_7nt_mkv2_m3 versus MA1959.2_rc (KLF7_rc); m=19/32; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.582006; ----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0
MA1522.2_shift4 (MAZ)				; oligos_7nt_mkv2_m3 versus MA1522.2 (MAZ); m=20/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.566925; ----CCCCTCCc-- ; cor=; Ncor= a 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 c 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 g 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 t 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0
MA1515.2_shift4 (KLF2)				; oligos_7nt_mkv2_m3 versus MA1515.2 (KLF2); m=21/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.564037; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0
MA1517.2_shift4 (KLF6)				; oligos_7nt_mkv2_m3 versus MA1517.2 (KLF6); m=22/32; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.55775; ----cCACRCCCm- ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0
MA0747.2_shift4 (SP8)				; oligos_7nt_mkv2_m3 versus MA0747.2 (SP8); m=23/32; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.555702; ----mCACgCCCmC ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0
MA1513.2_shift4 (KLF15)				; oligos_7nt_mkv2_m3 versus MA1513.2 (KLF15); m=24/32; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.550235; ----cCCCGCCC-- ; cor=; Ncor= a 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 c 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 g 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 t 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0
MA1627.2_shift0 (Wt1)				; oligos_7nt_mkv2_m3 versus MA1627.2 (Wt1); m=25/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.471394; cCTCCCCCAC---- ; cor=; Ncor= a 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 0 0 0 0 c 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 0 0 0 0 g 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 0 0 0 0 t 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 0 0 0 0
MA1578.2_shift2 (VEZF1)				; oligos_7nt_mkv2_m3 versus MA1578.2 (VEZF1); m=26/32; ncol2=6; w=0; offset=0; strand=D; shift=2; score=0.443751; --CCCCCC------ ; cor=; Ncor= a 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 0 0 0 0 c 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 0 0 0 0 g 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0 0 t 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0 0 0 0 0
MA1615.2_rc_shift1 (Plagl1_rc)				; oligos_7nt_mkv2_m3 versus MA1615.2_rc (Plagl1_rc); m=27/32; ncol2=8; w=-1; offset=-1; strand=R; shift=1; score=0.441894; -TGGCCCCa----- ; cor=; Ncor= a 0 371.0 398.0 321.0 142.0 183.0 323.0 118.0 9425.0 0 0 0 0 0 c 0 1032.0 422.0 313.0 13495.0 13517.0 12261.0 13595.0 1338.0 0 0 0 0 0 g 0 686.0 13152.0 12737.0 336.0 266.0 356.0 243.0 1471.0 0 0 0 0 0 t 0 12064.0 181.0 782.0 180.0 187.0 1213.0 197.0 1919.0 0 0 0 0 0
MA0056.3_shift1 (MZF1)				; oligos_7nt_mkv2_m3 versus MA0056.3 (MZF1); m=28/32; ncol2=8; w=-1; offset=-1; strand=D; shift=1; score=0.441538; -AATCCCCA----- ; cor=; Ncor= a 0 5855.0 7149.0 106.0 100.0 135.0 111.0 117.0 6036.0 0 0 0 0 0 c 0 1016.0 426.0 56.0 7949.0 7939.0 7919.0 7673.0 611.0 0 0 0 0 0 g 0 999.0 385.0 98.0 100.0 54.0 58.0 83.0 484.0 0 0 0 0 0 t 0 372.0 282.0 7982.0 93.0 114.0 154.0 369.0 1111.0 0 0 0 0 0
MA1715.1_shift4 (ZNF707)				; oligos_7nt_mkv2_m3 versus MA1715.1 (ZNF707); m=29/32; ncol2=15; w=0; offset=2; strand=D; shift=4; score=0.42175; ----CCCCACTYCT ; cor=; Ncor= a 0 0 0 0 37.0 37.0 12.0 41.0 1109.0 9.0 5.0 4.0 12.0 17.0 c 0 0 0 0 960.0 1057.0 1109.0 1044.0 5.0 1111.0 11.0 821.0 1079.0 83.0 g 0 0 0 0 34.0 31.0 9.0 8.0 17.0 5.0 2.0 11.0 9.0 5.0 t 0 0 0 0 126.0 32.0 27.0 64.0 26.0 32.0 1139.0 321.0 57.0 1052.0
MA0595.1_shift0 (SREBF1)				; oligos_7nt_mkv2_m3 versus MA0595.1 (SREBF1); m=30/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.411654; rTCACcCCAy---- ; cor=; Ncor= a 28.0 0.0 0.0 58.0 0.0 6.0 0.0 2.0 58.0 0.0 0 0 0 0 c 14.0 0.0 58.0 0.0 51.0 38.0 44.0 45.0 0.0 26.0 0 0 0 0 g 16.0 0.0 0.0 0.0 7.0 13.0 0.0 11.0 0.0 7.0 0 0 0 0 t 0.0 58.0 0.0 0.0 0.0 1.0 14.0 0.0 0.0 25.0 0 0 0 0
MA2328.1_shift0 (ZBED4)				; oligos_7nt_mkv2_m3 versus MA2328.1 (ZBED4); m=31/32; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.405799; CcCGCyCCGC---- ; cor=; Ncor= a 41.0 26.0 29.0 17.0 6.0 11.0 14.0 12.0 22.0 19.0 0 0 0 0 c 479.0 419.0 549.0 14.0 621.0 391.0 598.0 604.0 19.0 589.0 0 0 0 0 g 80.0 65.0 62.0 608.0 26.0 28.0 34.0 23.0 580.0 35.0 0 0 0 0 t 60.0 150.0 20.0 21.0 7.0 230.0 14.0 21.0 39.0 17.0 0 0 0 0
MA1965.2_shift6 (SP5)				; oligos_7nt_mkv2_m3 versus MA1965.2 (SP5); m=32/32; ncol2=6; w=0; offset=4; strand=D; shift=6; score=0.403981; ------CCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 c 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 g 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 t 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0