peak-motifs Oligodendrocyte_precursor_cells_MDD_off_on_drugs

Motif discovery

Motif 1 oligos_6nt_mkv2_m1

k-mer sig=10.48; evalue=3.3e-11

mmsCCGCSGCSGCGGskk

MMSCCGCSGCSGCGGSKK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmsCCGCSGCSGCGGskk

ZNF93 MA1721.2 D 14 0.7778 0.719 0.559 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 8 (10.13%)
Max nb of predicted sites per peak: 126
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 19.88

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv2_m2

k-mer sig=8.03; evalue=9.3e-09

ysCCTCCCavc

GBTGGGAGGSR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ysCCTCCCavc

ZNF148 MA1653.2 D 10 0.9091 0.762 0.693 NA NA

MAZ MA1522.2 D 8 0.7273 0.829 0.603 NA NA

SP4 MA0685.2 R 9 0.8182 0.726 0.594 NA NA

Total matches= 22 (19 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 32 (40.51%)
Max nb of predicted sites per peak: 3
(chr8:46408211-46409391)
Mean nb of predicted sites per peak: 1.31

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv2_m3

k-mer sig=4.49; evalue=3.2e-05

ckCCCAGCyy

RRGCTGGGMG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ckCCCAGCyy

Zfp809 MA2125.1 D 9 0.9000 0.879 0.791 NA NA

ZNF416 MA1979.2 R 10 1.0000 0.706 0.706 NA NA

FEZF2 MA2341.1 D 8 0.8000 0.848 0.678 NA NA

Total matches= 14 (11 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 32 (40.51%)
Max nb of predicted sites per peak: 3
(chrX:19556-20468)
Mean nb of predicted sites per peak: 1.47

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv2_m4

k-mer sig=3.68; evalue=0.00021

scCCCCACCsc

GSGGTGGGGGS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor scCCCCACCsc

KLF5 MA0599.1 D 10 0.9091 0.825 0.750 NA NA

PATZ1 MA1961.2 R 10 0.8333 0.846 0.705 NA NA

ZNF740 MA0753.3 D 10 0.9091 0.746 0.679 NA NA

Total matches= 29 (26 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 24 (30.38%)
Max nb of predicted sites per peak: 23
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 2.54

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv2_m5

k-mer sig=2.65; evalue=0.0022

mskTCACTGCAsy

RSTGCAGTGAMSK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mskTCACTGCAsy

GFI1 MA0038.3 D 11 0.8462 0.789 0.667 NA NA

ZNF768 MA1731.2 D 9 0.6923 0.706 0.489 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 20 (25.32%)
Max nb of predicted sites per peak: 2
(chrY:2934529-2936330)
Mean nb of predicted sites per peak: 1.45

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 oligos_7nt_mkv2_m1

k-mer sig=15.83; evalue=1.5e-16

cmcsCCGCSGCSGCGGskkg

CMMSCCGCSGCSGCGGSGKG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmcsCCGCSGCSGCGGskkg

ZNF93 MA1721.2 D 14 0.7000 0.714 0.500 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (8.86%)
Max nb of predicted sites per peak: 115
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 24.00

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 oligos_7nt_mkv2_m2

k-mer sig=15.83; evalue=1.5e-16

vmmGCSGCGGCGGsGgg

CCCSCCGCCGCSGCKKB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vmmGCSGCGGCGGsGgg

ZNF93 MA1721.2 D 13 0.7222 0.788 0.569 NA NA

PATZ1 MA1961.2 D 11 0.6471 0.793 0.513 NA NA

ZIC4 MA0751.2 R 12 0.6316 0.720 0.455 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (12.66%)
Max nb of predicted sites per peak: 101
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 16.00

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 oligos_7nt_mkv2_m3

k-mer sig=4.54; evalue=2.9e-05

ssCCCCaCCCcs

SGGGGTGGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCCCCaCCCcs

PATZ1 MA1961.2 R 11 0.9167 0.901 0.826 NA NA

KLF5 MA0599.1 D 10 0.8333 0.926 0.772 NA NA

ZNF148 MA1653.2 D 10 0.8333 0.852 0.710 NA NA

Total matches= 32 (29 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 22 (27.85%)
Max nb of predicted sites per peak: 22
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 2.59

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 oligos_7nt_mkv2_m4

k-mer sig=3.82; evalue=0.00015

aaAAAGCCGcg

CGCGGCTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAGCCGcg

SOX10 MA0442.3 D 6 0.5455 0.848 0.463 NA NA

Zfx MA0146.3 R 8 0.6154 0.704 0.433 NA NA

PRDM1 MA0508.4 R 6 0.5000 0.848 0.424 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (11.39%)
Max nb of predicted sites per peak: 37
(chr1:144076366-144077773)
Mean nb of predicted sites per peak: 5.11

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 oligos_7nt_mkv2_m5

k-mer sig=3.64; evalue=0.00023

chGCCTCCCArv

BYTGGGAGGCDG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor chGCCTCCCArv

ZNF460 MA1596.1 D 12 0.7500 0.878 0.658 NA NA

ZNF770 MA2099.1 D 8 0.6667 0.815 0.543 NA NA

Wt1 MA1627.2 D 9 0.6923 0.778 0.539 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 26 (32.91%)
Max nb of predicted sites per peak: 3
(chrY:13703337-13705536)
Mean nb of predicted sites per peak: 1.58

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: Oligodendrocyte_precursor_cells_MDD_off_on_drugs_down (16/05/2025 18:44)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmsCCGCSGCSGCGGskk

ZNF93 MA1721.2 D 14 0.7778 0.719 0.559 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mskTCACTGCAsy

GFI1 MA0038.3 D 11 0.8462 0.789 0.667 NA NA

ZNF768 MA1731.2 D 9 0.6923 0.706 0.489 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmcsCCGCSGCSGCGGskkg

ZNF93 MA1721.2 D 14 0.7000 0.714 0.500 NA NA

Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: Oligodendrocyte_precursor_cells_MDD_off_on_drugs_down (16/05/2025 18:44)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor mmsCCGCSGCSGCGGskk ZNF93 MA1721.2 D 14 0.7778 0.719 0.559 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor mskTCACTGCAsy GFI1 MA0038.3 D 11 0.8462 0.789 0.667 NA NA ZNF768 MA1731.2 D 9 0.6923 0.706 0.489 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cmcsCCGCSGCSGCGGskkg ZNF93 MA1721.2 D 14 0.7000 0.714 0.500 NA NA Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmsCCGCSGCSGCGGskk

ZNF93 MA1721.2 D 14 0.7778 0.719 0.559 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mskTCACTGCAsy

GFI1 MA0038.3 D 11 0.8462 0.789 0.667 NA NA

ZNF768 MA1731.2 D 9 0.6923 0.706 0.489 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmcsCCGCSGCSGCGGskkg

ZNF93 MA1721.2 D 14 0.7000 0.714 0.500 NA NA

Total matches= 1