; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	10	7	1	2	0	1	2	3	2	1	0	5	15
c	28	18	5	50	56	53	53	1	51	55	50	26	20
g	8	27	47	3	0	1	0	50	3	1	3	10	18
t	11	5	4	2	1	2	2	3	1	0	4	16	4
//
; Sites	57
>site_0
CGGCCCCGCCCAC
>site_1
AGGCCCCGCCCCC
>site_2
TGGCCCCGCCCTA
>site_3
AGGCCTCGCCCTC
>site_4
TAGCCCCACCCTA
>site_5
CGGCCCCGCCTCC
>site_6
CCGCCCCGGCCCC
>site_7
ACCCCCCGCCCCG
>site_8
TCGGCCCGTCCAA
>site_9
CGGCCCCGCCTCC
>site_10
CGGCCCCTCCCTA
>site_11
CAGCCCCGACCGG
>site_12
GAGCCCAGCCCCG
>site_13
CGGCCCCGCCCCA
>site_14
CGGCCCCGCCCCA
>site_15
GAGCCCAGCCCCG
>site_16
CAGCCCCGACCGG
>site_17
CGGCCCCTCCCTA
>site_18
CGGCCCCGCCTCC
>site_19
ACGCCCTGCCCCG
>site_20
CTGCCCCGGCCCC
>site_21
CGGCCCCGCCTCC
>site_22
TAGCCCCGCCCTA
>site_23
TATCCCCGCCCTA
>site_24
TGACCCCGCCCCA
>site_25
AGGCCTCGCCCTC
>site_26
AGGCCCCGCCCTC
>site_27
TGGCCCCGCCCTA
>site_28
AGGCCCCGCCCCC
>site_29
CGGCCCCGCCCAC
>site_30
CCGGCCCGCCCGC
>site_31
AGGCTCCGCCCGA
>site_32
ACCCCCCGCCCGG
>site_33
GCGCCCCGCCGCG
>site_34
CCGCCGCGCCCCA
>site_35
GCGCCCCACCCTG
>site_36
CTTCCCCGCCCAG
>site_37
TCTCCCCGCCCTT
>site_38
ACGCCCCGCACCG
>site_39
GCCCCCCGCCCGA
>site_40
GCGCCACGCCCCC
>site_41
GGGCCCCGCCCGC
>site_42
CCGCCCTGCCCGG
>site_43
TGGACCCGCCCCC
>site_44
CGGCCCCCCCCAA
>site_45
CGGCCCCACCCCC
>site_46
CTGCCCCGCGCGG
>site_47
TGCCCCCGCCCTT
>site_48
CTTCCCCGCCCTT
>site_49
CGCGCCCGCCCGC
>site_50
CCGCCCCGCCGCC
>site_51
CTGTCCCGCCCCG
>site_52
TGGCCCCGCCGTG
>site_53
GGGACCCGCCCCT
>site_54
CCGCCCCTCCCCG
>site_55
CCGCCCCGGCCTG
>site_56
CCGTCCCGCCCCG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	10	4	20	1	21	0	21	0	22	1	10	2
c	6	7	1	3	0	18	0	22	0	19	4	15
g	3	8	1	17	1	3	1	0	0	2	4	5
t	3	3	0	1	0	1	0	0	0	0	4	0
//
; Sites	22
>site_0
ACATACACACAC
>site_1
ATACACACACTG
>site_2
CTGGACACACGA
>site_3
CCAGACACACAC
>site_4
AGACACACACTG
>site_5
TTAGAGACACAC
>site_6
AGAGACACACCA
>site_7
TGAGAGACACAC
>site_8
AGAGACACACGC
>site_9
GGAAACACACAG
>site_10
TCAGACACACCC
>site_11
CCAGACACACAC
>site_12
AGACACACACAC
>site_13
ACAGAGACACAC
>site_14
AGAGACACACGC
>site_15
ACAGACACACTC
>site_16
AAAGGCACACAC
>site_17
CAAGACACAGTC
>site_18
GGAGATACACCC
>site_19
CCAGACACAGCC
>site_20
GAAGACACAAAG
>site_21
CACGACGCACGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	1	2	0	12	0	14	0	0	0	9	3	2
c	8	8	15	1	14	2	16	0	16	4	4	7
g	5	5	1	3	1	0	0	16	0	2	7	6
t	2	1	0	0	1	0	0	0	0	1	2	1
//
; Sites	16
>site_0
CTCATACGCAGG
>site_1
CGCGCACGCTGC
>site_2
CCCACACGCAAG
>site_3
CCCCCACGCAAG
>site_4
AGGACACGCACC
>site_5
GACACACGCCGG
>site_6
GGCACACGCACC
>site_7
GACACACGCAAC
>site_8
CCCACCCGCACG
>site_9
GCCGCACGCCGC
>site_10
TGCACACGCATA
>site_11
GCCACACGCCGT
>site_12
CCCGCACGCGGC
>site_13
CCCACCCGCACG
>site_14
TCCAGACGCCGC
>site_15
CGCACACGCGTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	3	2	3	1	0	0	3	0	0	0	1	6
c	12	15	29	33	2	32	26	3	31	6	15	13
g	12	16	2	0	31	2	5	31	2	27	12	10
t	7	1	0	0	1	0	0	0	1	1	6	5
//
; Sites	34
>site_0
GCCCGCCGCCCC
>site_1
GGCCGCAGCGTT
>site_2
TGCCGCCGCGCA
>site_3
CCCCGCCCCGGC
>site_4
TGCCCCCGCGCA
>site_5
GGCCGCAGCGTT
>site_6
TCCCGCCGCCTC
>site_7
CCCCGCCGCGCC
>site_8
GCACGCCGCGGC
>site_9
CGCCGCGGCGTG
>site_10
CGCCGCGGCGCC
>site_11
GGGCGCCGCGGC
>site_12
GGCCTCCGCGGT
>site_13
CCCCGGCGCGCA
>site_14
GGCAGCCGCGCA
>site_15
GACCGCCGCCGC
>site_16
CGCCGCCGCCCT
>site_17
CGACGCCGGGTA
>site_18
AGCCGCAGCGCG
>site_19
CACCCCCGCGCG
>site_20
GCCCGGCGCGCG
>site_21
GCCCGCCGCTCG
>site_22
CGCCGCCGCCGG
>site_23
CCCCGCCGCCGC
>site_24
TCCCGCCCCGCC
>site_25
GGCCGCCGGGCT
>site_26
CCCCGCCGTGAG
>site_27
ACCCGCGGCGGG
>site_28
CCCCGCCGCGGG
>site_29
TCCCGCCCCGGC
>site_30
TTCCGCGGCGTC
>site_31
AGACGCCGCGGA
>site_32
GGGCGCCGCGGG
>site_33
TCCCGCGGCGCC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	3	4	0	0	0	20	0	0	22	3	6
c	8	8	22	21	22	1	1	21	0	13	9
g	5	5	0	1	0	1	21	1	0	3	6
t	6	5	0	0	0	0	0	0	0	3	1
//
; Sites	22
>site_0
CTCCCAGCAGC
>site_1
TACCCAGGACC
>site_2
TACCCAGCACC
>site_3
AACCCAGCAAG
>site_4
CCCCCAGCACT
>site_5
CCCCCAGCACA
>site_6
GCCCCAGCATA
>site_7
GTCCCAGCAAG
>site_8
TTCCCAGCACA
>site_9
TCCCCAGCACA
>site_10
ATCCCAGCACA
>site_11
ATCCCAGCACA
>site_12
GCCCCACCACG
>site_13
CGCCCAGCAGG
>site_14
TGCCCAGCAAC
>site_15
CGCCCCGCACC
>site_16
GACCCAGCACC
>site_17
CCCCCAGCACC
>site_18
CCCCCAGCAGC
>site_19
CGCCCAGCATG
>site_20
GGCGCAGCATC
>site_21
TCCCCGGCACG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184320_2025-05-16.184320_WEQUPM/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-05-16.184337
; Job done	2025-05-16.184339
; Seconds	0.14
;	user	0.14
;	system	0.04
;	cuser	1.23
;	csystem	0.19
