position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 3 -ci 20 -img_format png -title Pericytes_MDD_off_on_drugs_down -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/results/composition/peak-motifs_test_profiles-1str-ovlp_3nt_ci20.tab Citation: van Helden, et al. (2000). Nucleic Acids Res 28, 1000-1010. Sequence file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta Sequence format fasta Sequence type dna Output file $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/results/composition/peak-motifs_test_profiles-1str-ovlp_3nt_ci20.tab Oligo length 3 Occurrences counted on a single strands Conditions of applicability checked. Background model estimation: homogeneous repartition Sequence statistics: Nb of sequences 53 Sum of sequence lengths 43419 Min sequence length 0 Max sequence length 1000 Average sequence length 819 Possible positions 43313 Sequences: # length ID 1 599 chr5:159524959-159525557 2 1000 chr18:50748190-50749214 3 1000 chr3:160718946-160719949 4 1000 chr7:2670423-2671712 5 1000 chr17:3501368-3504522 6 921 chr5:116388351-116389271 7 1000 chr18:79933563-79935788 8 632 chr22:29091715-29092346 9 678 chr16:87849853-87850530 10 615 chr1:203083871-203084485 11 1000 chr2:133755248-133756275 12 860 chr7:56130625-56131484 13 828 chr18:68549011-68549838 14 471 chr4:158008497-158008967 15 406 chr13:99000150-99000555 16 608 chr11:131906827-131907434 17 1000 chr11:106249185-106250462 18 628 chr19:5403833-5404460 19 857 chr2:66853442-66854298 20 1000 chr1:35714936-35716001 21 1000 chr2:43067504-43069193 22 721 chr5:150492333-150493053 23 1000 chr11:95433991-95436078 24 1000 chr5:72120945-72123083 25 1000 chr7:148663774-148664820 26 942 chr3:59857379-59858320 27 783 chr19:2390972-2391754 28 693 chr3:42751376-42752068 29 913 chr1:226824772-226825684 30 1000 chr20:57921139-57923794 31 1000 chr11:129375144-129376270 32 783 chr9:15142517-15143299 33 475 chr17:30227694-30228168 34 1000 chr12:24413697-24414924 35 836 chr18:62377204-62378039 36 504 chr11:36049833-36050336 37 1000 chr11:15569376-15570493 38 532 chr2:28321311-28321842 39 642 chr16:4339620-4340261 40 1000 chr1:65277615-65279375 41 691 chr7:157329175-157329865 42 742 chr17:77928782-77929523 43 611 chr14:32724775-32725385 44 1000 chr1:17652862-17654227 45 1000 chr4:176435138-176436959 46 1000 chr15:99711105-99712282 47 551 chr10:71091913-71092463 48 1000 chr5:132064352-132065705 49 820 chr1:24830397-24831216 50 690 chr15:81284266-81284955 51 1000 chr4:157221441-157223200 52 896 chr12:131624328-131625223 53 491 chr7:35995139-35995629 Oligonucleotide statistics: Total occurrences 42990 Position interval parameters: Position interval 20 Number of windows 50 Total positions 43313 Degrees of freedom 49 K-mer clustering parameters: Number of clusters 0 Clustering method complete Position intervals: window [min,max] mid seq occ 1 -25 [-499,-480] -489.5 22 440 2 -24 [-479,-460] -469.5 24 453 3 -23 [-459,-440] -449.5 26 505 4 -22 [-439,-420] -429.5 28 539 5 -21 [-419,-400] -409.5 31 602 6 -20 [-399,-380] -389.5 33 644 7 -19 [-379,-360] -369.5 35 673 8 -18 [-359,-340] -349.5 38 719 9 -17 [-339,-320] -329.5 40 782 10 -16 [-319,-300] -309.5 45 848 11 -15 [-299,-280] -289.5 46 920 12 -14 [-279,-260] -269.5 48 942 13 -13 [-259,-240] -249.5 50 978 14 -12 [-239,-220] -229.5 52 1034 15 -11 [-219,-200] -209.5 53 1044 16 -10 [-199,-180] -189.5 53 1060 17 -9 [-179,-160] -169.5 53 1060 18 -8 [-159,-140] -149.5 53 1060 19 -7 [-139,-120] -129.5 53 1060 20 -6 [-119,-100] -109.5 53 1060 21 -5 [-99,-80] -89.5 53 1060 22 -4 [-79,-60] -69.5 53 1060 23 -3 [-59,-40] -49.5 53 1060 24 -2 [-39,-20] -29.5 53 1060 25 -1 [-19,0] -9.5 53 1060 26 0 [1,20] 10.5 53 1060 27 1 [21,40] 30.5 53 1060 28 2 [41,60] 50.5 53 1060 29 3 [61,80] 70.5 53 1060 30 4 [81,100] 90.5 53 1060 31 5 [101,120] 110.5 53 1060 32 6 [121,140] 130.5 53 1060 33 7 [141,160] 150.5 53 1060 34 8 [161,180] 170.5 53 1060 35 9 [181,200] 190.5 53 1060 36 10 [201,220] 210.5 52 1040 37 11 [221,240] 230.5 52 1028 38 12 [241,260] 250.5 50 973 39 13 [261,280] 270.5 48 937 40 14 [281,300] 290.5 46 917 41 15 [301,320] 310.5 45 834 42 16 [321,340] 330.5 39 776 43 17 [341,360] 350.5 38 707 44 18 [361,380] 370.5 34 668 45 19 [381,400] 390.5 33 638 46 20 [401,420] 410.5 31 596 47 21 [421,440] 430.5 28 534 48 22 [441,460] 450.5 26 498 49 23 [461,480] 470.5 23 448 50 24 [481,500] 490.5 22 396 Column headers 1 seq pattern sequence 2 id pattern identifier 3 occ pattern occurrences 4 chi2 observed chi-square 5 df degrees of freedom 6 Pval P-value (probability for one word to be a false positive) 7 Eval E-value; expected number of false positives (Eval = Pval * nb_tests) 8 sig Significance (sig = -log10(Eval)) 9 rank rank of the pattern according to sorting criterion 10 -489.5 occurrences in window 1 [-499,-480] 11 -469.5 occurrences in window 2 [-479,-460] 12 -449.5 occurrences in window 3 [-459,-440] 13 -429.5 occurrences in window 4 [-439,-420] 14 -409.5 occurrences in window 5 [-419,-400] 15 -389.5 occurrences in window 6 [-399,-380] 16 -369.5 occurrences in window 7 [-379,-360] 17 -349.5 occurrences in window 8 [-359,-340] 18 -329.5 occurrences in window 9 [-339,-320] 19 -309.5 occurrences in window 10 [-319,-300] 20 -289.5 occurrences in window 11 [-299,-280] 21 -269.5 occurrences in window 12 [-279,-260] 22 -249.5 occurrences in window 13 [-259,-240] 23 -229.5 occurrences in window 14 [-239,-220] 24 -209.5 occurrences in window 15 [-219,-200] 25 -189.5 occurrences in window 16 [-199,-180] 26 -169.5 occurrences in window 17 [-179,-160] 27 -149.5 occurrences in window 18 [-159,-140] 28 -129.5 occurrences in window 19 [-139,-120] 29 -109.5 occurrences in window 20 [-119,-100] 30 -89.5 occurrences in window 21 [-99,-80] 31 -69.5 occurrences in window 22 [-79,-60] 32 -49.5 occurrences in window 23 [-59,-40] 33 -29.5 occurrences in window 24 [-39,-20] 34 -9.5 occurrences in window 25 [-19,0] 35 10.5 occurrences in window 26 [1,20] 36 30.5 occurrences in window 27 [21,40] 37 50.5 occurrences in window 28 [41,60] 38 70.5 occurrences in window 29 [61,80] 39 90.5 occurrences in window 30 [81,100] 40 110.5 occurrences in window 31 [101,120] 41 130.5 occurrences in window 32 [121,140] 42 150.5 occurrences in window 33 [141,160] 43 170.5 occurrences in window 34 [161,180] 44 190.5 occurrences in window 35 [181,200] 45 210.5 occurrences in window 36 [201,220] 46 230.5 occurrences in window 37 [221,240] 47 250.5 occurrences in window 38 [241,260] 48 270.5 occurrences in window 39 [261,280] 49 290.5 occurrences in window 40 [281,300] 50 310.5 occurrences in window 41 [301,320] 51 330.5 occurrences in window 42 [321,340] 52 350.5 occurrences in window 43 [341,360] 53 370.5 occurrences in window 44 [361,380] 54 390.5 occurrences in window 45 [381,400] 55 410.5 occurrences in window 46 [401,420] 56 430.5 occurrences in window 47 [421,440] 57 450.5 occurrences in window 48 [441,460] 58 470.5 occurrences in window 49 [461,480] 59 490.5 occurrences in window 50 [481,500]
| seq | id | occ | chi2 | df | Pval | Eval | sig | rank | -489.5 | -469.5 | -449.5 | -429.5 | -409.5 | -389.5 | -369.5 | -349.5 | -329.5 | -309.5 | -289.5 | -269.5 | -249.5 | -229.5 | -209.5 | -189.5 | -169.5 | -149.5 | -129.5 | -109.5 | -89.5 | -69.5 | -49.5 | -29.5 | -9.5 | 10.5 | 30.5 | 50.5 | 70.5 | 90.5 | 110.5 | 130.5 | 150.5 | 170.5 | 190.5 | 210.5 | 230.5 | 250.5 | 270.5 | 290.5 | 310.5 | 330.5 | 350.5 | 370.5 | 390.5 | 410.5 | 430.5 | 450.5 | 470.5 | 490.5 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ttt | ttt | 1226 | 176.1 | 49 | 3.1e-16 | 2e-14 | 13.70 | 1 | 19 | 21 | 15 | 8 | 28 | 21 | 22 | 32 | 19 | 16 | 27 | 22 | 30 | 31 | 25 | 18 | 25 | 50 | 36 | 32 | 29 | 15 | 30 | 23 | 28 | 42 | 30 | 28 | 25 | 40 | 43 | 19 | 22 | 43 | 43 | 11 | 18 | 16 | 16 | 26 | 15 | 16 | 24 | 11 | 44 | 29 | 14 | 9 | 9 | 11 |
| aaa | aaa | 1163 | 171.7 | 49 | 1.6e-15 | 1e-13 | 13.00 | 2 | 10 | 15 | 7 | 13 | 19 | 23 | 28 | 31 | 35 | 23 | 30 | 22 | 34 | 28 | 25 | 31 | 29 | 15 | 33 | 50 | 40 | 59 | 17 | 21 | 21 | 26 | 31 | 42 | 35 | 13 | 21 | 26 | 35 | 17 | 20 | 27 | 11 | 19 | 25 | 9 | 29 | 21 | 13 | 25 | 17 | 5 | 9 | 14 | 9 | 5 |
| aca | aca | 851 | 73.5 | 49 | 1.3e-02 | 0.85 | 0.07 | 3 | 7 | 9 | 17 | 15 | 9 | 18 | 19 | 13 | 14 | 20 | 11 | 26 | 25 | 27 | 23 | 22 | 19 | 34 | 30 | 22 | 25 | 27 | 22 | 22 | 18 | 20 | 29 | 16 | 19 | 17 | 18 | 13 | 25 | 13 | 21 | 16 | 16 | 18 | 11 | 11 | 14 | 9 | 9 | 9 | 13 | 15 | 10 | 2 | 8 | 5 |
| ggg | ggg | 908 | 71.5 | 49 | 1.9e-02 | 1.2 | -0.10 | 4 | 7 | 11 | 11 | 17 | 15 | 17 | 7 | 17 | 8 | 17 | 19 | 17 | 16 | 23 | 15 | 27 | 14 | 16 | 21 | 30 | 23 | 30 | 18 | 25 | 20 | 25 | 25 | 19 | 19 | 16 | 36 | 17 | 31 | 28 | 11 | 15 | 22 | 19 | 20 | 21 | 14 | 14 | 15 | 26 | 20 | 12 | 10 | 12 | 9 | 11 |
| tct | tct | 928 | 69.2 | 49 | 3.0e-02 | 1.9 | -0.29 | 5 | 6 | 7 | 7 | 7 | 14 | 7 | 18 | 12 | 13 | 13 | 25 | 29 | 17 | 21 | 20 | 16 | 14 | 22 | 41 | 21 | 22 | 17 | 35 | 23 | 32 | 21 | 23 | 20 | 21 | 19 | 25 | 27 | 21 | 15 | 23 | 25 | 27 | 19 | 17 | 26 | 12 | 20 | 15 | 21 | 17 | 10 | 12 | 14 | 12 | 7 |
| cct | cct | 921 | 67.8 | 49 | 3.9e-02 | 2.5 | -0.39 | 6 | 6 | 9 | 14 | 11 | 9 | 8 | 8 | 9 | 13 | 21 | 29 | 16 | 22 | 18 | 21 | 22 | 18 | 24 | 18 | 27 | 18 | 17 | 18 | 18 | 28 | 22 | 17 | 21 | 24 | 35 | 17 | 37 | 21 | 20 | 33 | 36 | 19 | 28 | 18 | 18 | 18 | 22 | 16 | 11 | 15 | 12 | 8 | 11 | 9 | 11 |
| cat | cat | 692 | 67.2 | 49 | 4.3e-02 | 2.8 | -0.44 | 7 | 7 | 10 | 8 | 14 | 6 | 14 | 13 | 12 | 20 | 17 | 7 | 19 | 18 | 18 | 13 | 21 | 24 | 16 | 21 | 9 | 14 | 13 | 18 | 7 | 20 | 12 | 24 | 16 | 12 | 8 | 11 | 11 | 8 | 18 | 21 | 20 | 25 | 21 | 14 | 17 | 13 | 15 | 11 | 8 | 9 | 11 | 11 | 6 | 6 | 5 |
| gtc | gtc | 437 | 64.6 | 49 | 6.7e-02 | 4.3 | -0.63 | 8 | 2 | 2 | 5 | 4 | 6 | 7 | 7 | 2 | 9 | 7 | 5 | 6 | 5 | 14 | 6 | 6 | 14 | 17 | 9 | 12 | 10 | 7 | 15 | 5 | 11 | 9 | 18 | 5 | 5 | 13 | 12 | 12 | 14 | 10 | 7 | 16 | 22 | 12 | 9 | 8 | 10 | 12 | 3 | 9 | 7 | 4 | 6 | 6 | 7 | 8 |
| gag | gag | 993 | 64.3 | 49 | 7.1e-02 | 4.5 | -0.65 | 9 | 12 | 15 | 13 | 13 | 21 | 21 | 13 | 17 | 18 | 16 | 21 | 21 | 27 | 17 | 27 | 34 | 19 | 20 | 27 | 26 | 28 | 23 | 40 | 36 | 25 | 21 | 21 | 21 | 29 | 20 | 26 | 28 | 22 | 22 | 18 | 12 | 24 | 18 | 23 | 27 | 10 | 13 | 17 | 12 | 9 | 18 | 11 | 8 | 9 | 4 |
| tgc | tgc | 849 | 64.1 | 49 | 7.3e-02 | 4.7 | -0.67 | 10 | 13 | 11 | 9 | 11 | 11 | 6 | 5 | 10 | 17 | 14 | 17 | 22 | 20 | 22 | 15 | 24 | 23 | 25 | 12 | 14 | 15 | 15 | 23 | 15 | 17 | 31 | 21 | 21 | 18 | 12 | 21 | 22 | 21 | 24 | 32 | 27 | 22 | 21 | 20 | 30 | 15 | 21 | 14 | 8 | 11 | 10 | 10 | 8 | 10 | 13 |
| aga | aga | 1020 | 61.9 | 49 | 1.0e-01 | 6.5 | -0.81 | 11 | 9 | 13 | 17 | 19 | 15 | 20 | 16 | 20 | 19 | 25 | 26 | 20 | 19 | 26 | 21 | 34 | 22 | 19 | 32 | 29 | 29 | 31 | 40 | 28 | 24 | 19 | 24 | 22 | 31 | 16 | 26 | 16 | 25 | 24 | 24 | 18 | 23 | 7 | 17 | 20 | 12 | 18 | 17 | 14 | 13 | 15 | 17 | 9 | 13 | 7 |
| ccc | ccc | 823 | 61.0 | 49 | 1.2e-01 | 7.4 | -0.87 | 12 | 5 | 7 | 7 | 12 | 12 | 6 | 12 | 9 | 16 | 9 | 26 | 21 | 12 | 18 | 14 | 28 | 21 | 14 | 22 | 19 | 26 | 16 | 19 | 24 | 20 | 14 | 17 | 26 | 24 | 19 | 20 | 30 | 16 | 23 | 25 | 24 | 20 | 23 | 22 | 16 | 14 | 18 | 23 | 8 | 12 | 9 | 5 | 7 | 3 | 10 |
| ctc | ctc | 884 | 60.3 | 49 | 1.3e-01 | 8.3 | -0.92 | 13 | 9 | 5 | 6 | 9 | 13 | 7 | 16 | 7 | 13 | 16 | 24 | 21 | 23 | 21 | 28 | 11 | 19 | 9 | 26 | 20 | 15 | 24 | 21 | 18 | 31 | 19 | 17 | 22 | 18 | 21 | 24 | 28 | 22 | 16 | 22 | 27 | 24 | 23 | 15 | 26 | 22 | 21 | 17 | 17 | 10 | 12 | 12 | 16 | 14 | 7 |
| act | act | 578 | 59.4 | 49 | 1.5e-01 | 9.3 | -0.97 | 14 | 3 | 4 | 8 | 5 | 6 | 10 | 8 | 5 | 19 | 6 | 10 | 12 | 17 | 13 | 22 | 6 | 14 | 18 | 13 | 12 | 11 | 15 | 16 | 16 | 17 | 10 | 7 | 11 | 17 | 16 | 9 | 18 | 16 | 15 | 13 | 9 | 11 | 13 | 16 | 13 | 13 | 12 | 16 | 10 | 7 | 7 | 8 | 13 | 10 | 2 |
| ggc | ggc | 749 | 57.8 | 49 | 1.8e-01 | 12 | -1.07 | 15 | 10 | 9 | 8 | 8 | 10 | 14 | 9 | 13 | 5 | 22 | 9 | 17 | 23 | 10 | 14 | 19 | 15 | 14 | 18 | 16 | 15 | 20 | 9 | 24 | 20 | 18 | 20 | 12 | 13 | 26 | 21 | 22 | 14 | 22 | 13 | 21 | 18 | 22 | 22 | 18 | 19 | 8 | 10 | 11 | 16 | 11 | 10 | 13 | 7 | 11 |
| gat | gat | 502 | 57.5 | 49 | 1.9e-01 | 12 | -1.08 | 16 | 7 | 0 | 6 | 5 | 9 | 9 | 9 | 9 | 10 | 6 | 9 | 15 | 11 | 13 | 24 | 14 | 12 | 12 | 9 | 13 | 18 | 14 | 9 | 14 | 9 | 14 | 8 | 15 | 13 | 9 | 12 | 13 | 14 | 9 | 11 | 10 | 5 | 9 | 3 | 10 | 6 | 10 | 6 | 11 | 7 | 8 | 12 | 7 | 10 | 4 |
| tat | tat | 490 | 57.1 | 49 | 2.0e-01 | 13 | -1.11 | 17 | 7 | 5 | 3 | 5 | 4 | 6 | 17 | 15 | 13 | 9 | 5 | 14 | 15 | 11 | 18 | 19 | 16 | 12 | 8 | 14 | 14 | 8 | 9 | 12 | 12 | 8 | 10 | 11 | 8 | 11 | 9 | 12 | 12 | 9 | 12 | 10 | 13 | 6 | 11 | 14 | 12 | 9 | 3 | 8 | 3 | 9 | 7 | 5 | 3 | 4 |
| ctg | ctg | 1182 | 56.8 | 49 | 2.1e-01 | 13 | -1.12 | 18 | 9 | 12 | 16 | 9 | 12 | 17 | 12 | 12 | 17 | 23 | 24 | 19 | 26 | 16 | 27 | 27 | 25 | 36 | 28 | 27 | 27 | 22 | 42 | 26 | 29 | 35 | 20 | 26 | 24 | 36 | 26 | 44 | 28 | 29 | 36 | 33 | 28 | 27 | 25 | 37 | 24 | 21 | 22 | 22 | 23 | 21 | 16 | 13 | 15 | 11 |
| gct | gct | 844 | 56.0 | 49 | 2.3e-01 | 15 | -1.17 | 19 | 18 | 10 | 9 | 6 | 12 | 10 | 8 | 10 | 17 | 19 | 18 | 12 | 22 | 15 | 20 | 21 | 24 | 17 | 14 | 17 | 14 | 18 | 23 | 20 | 21 | 30 | 15 | 26 | 14 | 20 | 19 | 22 | 14 | 27 | 22 | 24 | 18 | 25 | 19 | 28 | 18 | 11 | 13 | 15 | 17 | 12 | 11 | 12 | 6 | 11 |
| cac | cac | 736 | 55.8 | 49 | 2.4e-01 | 15 | -1.18 | 20 | 5 | 6 | 13 | 13 | 7 | 14 | 10 | 9 | 11 | 17 | 11 | 21 | 22 | 18 | 25 | 20 | 20 | 34 | 26 | 14 | 20 | 14 | 18 | 15 | 19 | 13 | 18 | 16 | 19 | 25 | 12 | 13 | 22 | 14 | 19 | 14 | 11 | 19 | 14 | 13 | 12 | 15 | 8 | 10 | 8 | 9 | 11 | 7 | 8 | 4 |
| gca | gca | 793 | 55.7 | 49 | 2.4e-01 | 15 | -1.18 | 21 | 8 | 11 | 7 | 10 | 8 | 11 | 8 | 10 | 5 | 17 | 12 | 17 | 20 | 19 | 22 | 15 | 20 | 29 | 23 | 10 | 16 | 18 | 23 | 26 | 21 | 15 | 24 | 15 | 17 | 16 | 21 | 20 | 19 | 23 | 21 | 14 | 22 | 21 | 22 | 28 | 22 | 17 | 5 | 12 | 8 | 13 | 7 | 11 | 9 | 5 |
| tga | tga | 757 | 55.1 | 49 | 2.5e-01 | 16 | -1.21 | 22 | 13 | 6 | 8 | 10 | 10 | 21 | 12 | 13 | 16 | 17 | 10 | 18 | 19 | 13 | 25 | 18 | 18 | 13 | 17 | 18 | 24 | 21 | 29 | 12 | 21 | 17 | 17 | 20 | 22 | 16 | 16 | 19 | 19 | 13 | 17 | 16 | 9 | 16 | 20 | 20 | 16 | 7 | 13 | 14 | 7 | 17 | 8 | 7 | 6 | 3 |
| gcc | gcc | 767 | 54.4 | 49 | 2.8e-01 | 18 | -1.25 | 23 | 5 | 7 | 7 | 9 | 11 | 7 | 6 | 11 | 8 | 14 | 21 | 21 | 13 | 14 | 9 | 20 | 20 | 17 | 10 | 18 | 21 | 21 | 15 | 23 | 16 | 26 | 16 | 21 | 18 | 18 | 20 | 24 | 24 | 19 | 26 | 26 | 19 | 26 | 18 | 12 | 21 | 16 | 17 | 7 | 12 | 8 | 8 | 6 | 5 | 10 |
| atg | atg | 709 | 53.4 | 49 | 3.1e-01 | 20 | -1.29 | 24 | 8 | 6 | 6 | 14 | 12 | 13 | 8 | 15 | 18 | 19 | 9 | 18 | 15 | 16 | 25 | 20 | 24 | 16 | 13 | 16 | 15 | 19 | 20 | 13 | 10 | 17 | 20 | 23 | 18 | 9 | 17 | 12 | 22 | 12 | 15 | 17 | 25 | 10 | 16 | 19 | 15 | 12 | 4 | 12 | 7 | 9 | 10 | 5 | 9 | 6 |
| tgt | tgt | 863 | 53.2 | 49 | 3.2e-01 | 20 | -1.31 | 25 | 6 | 6 | 12 | 5 | 9 | 11 | 17 | 12 | 11 | 15 | 15 | 18 | 14 | 23 | 16 | 21 | 22 | 42 | 20 | 25 | 17 | 18 | 21 | 27 | 26 | 22 | 20 | 22 | 18 | 25 | 19 | 23 | 28 | 21 | 24 | 21 | 30 | 19 | 13 | 14 | 13 | 14 | 11 | 10 | 14 | 11 | 12 | 11 | 11 | 8 |
| gtt | gtt | 589 | 52.5 | 49 | 3.4e-01 | 22 | -1.34 | 26 | 2 | 4 | 7 | 6 | 6 | 6 | 8 | 16 | 6 | 9 | 9 | 9 | 11 | 12 | 10 | 20 | 15 | 13 | 13 | 15 | 11 | 14 | 14 | 18 | 17 | 17 | 16 | 18 | 18 | 20 | 23 | 17 | 18 | 22 | 13 | 15 | 13 | 9 | 8 | 11 | 6 | 5 | 16 | 8 | 9 | 11 | 8 | 8 | 7 | 2 |
| tag | tag | 446 | 51.3 | 49 | 3.9e-01 | 25 | -1.39 | 27 | 5 | 8 | 2 | 5 | 3 | 5 | 11 | 6 | 7 | 9 | 15 | 13 | 13 | 10 | 12 | 15 | 10 | 10 | 8 | 13 | 11 | 14 | 10 | 15 | 17 | 14 | 7 | 9 | 10 | 16 | 14 | 5 | 14 | 14 | 5 | 8 | 7 | 6 | 10 | 3 | 11 | 8 | 3 | 10 | 7 | 3 | 3 | 3 | 5 | 4 |
| acc | acc | 488 | 51.1 | 49 | 3.9e-01 | 25 | -1.40 | 28 | 5 | 3 | 10 | 7 | 5 | 10 | 4 | 10 | 9 | 16 | 9 | 5 | 9 | 12 | 11 | 11 | 13 | 10 | 12 | 7 | 13 | 11 | 12 | 4 | 10 | 7 | 10 | 10 | 17 | 18 | 8 | 12 | 18 | 9 | 14 | 13 | 9 | 16 | 17 | 10 | 13 | 12 | 7 | 6 | 6 | 6 | 10 | 4 | 4 | 4 |
| ata | ata | 504 | 50.7 | 49 | 4.0e-01 | 26 | -1.41 | 29 | 3 | 8 | 10 | 5 | 4 | 10 | 17 | 10 | 15 | 12 | 11 | 10 | 16 | 12 | 15 | 17 | 21 | 13 | 9 | 12 | 14 | 10 | 7 | 13 | 11 | 11 | 15 | 13 | 9 | 7 | 10 | 12 | 10 | 13 | 11 | 11 | 9 | 5 | 9 | 12 | 12 | 6 | 6 | 8 | 6 | 5 | 5 | 5 | 5 | 4 |
| gga | gga | 897 | 50.6 | 49 | 4.1e-01 | 26 | -1.42 | 30 | 7 | 8 | 10 | 15 | 23 | 10 | 12 | 16 | 18 | 10 | 21 | 19 | 25 | 24 | 27 | 24 | 26 | 14 | 23 | 24 | 24 | 28 | 17 | 29 | 16 | 22 | 20 | 25 | 25 | 25 | 20 | 20 | 23 | 22 | 13 | 11 | 20 | 20 | 18 | 13 | 17 | 19 | 17 | 18 | 16 | 10 | 11 | 9 | 11 | 2 |
| ggt | ggt | 551 | 49.9 | 49 | 4.4e-01 | 28 | -1.45 | 31 | 6 | 4 | 5 | 14 | 6 | 9 | 10 | 12 | 3 | 8 | 10 | 12 | 12 | 20 | 12 | 14 | 14 | 10 | 10 | 13 | 16 | 9 | 11 | 13 | 16 | 10 | 15 | 9 | 9 | 16 | 15 | 20 | 15 | 19 | 7 | 10 | 17 | 13 | 17 | 10 | 6 | 11 | 11 | 12 | 5 | 8 | 5 | 8 | 6 | 8 |
| cta | cta | 412 | 49.8 | 49 | 4.4e-01 | 28 | -1.45 | 32 | 3 | 6 | 6 | 2 | 3 | 6 | 8 | 6 | 10 | 11 | 12 | 6 | 13 | 10 | 10 | 14 | 8 | 10 | 9 | 11 | 12 | 8 | 8 | 11 | 21 | 10 | 10 | 9 | 9 | 12 | 5 | 18 | 4 | 6 | 11 | 6 | 13 | 9 | 11 | 3 | 7 | 7 | 5 | 7 | 9 | 3 | 4 | 3 | 3 | 4 |
| tca | tca | 729 | 48.1 | 49 | 5.1e-01 | 33 | -1.51 | 33 | 11 | 5 | 3 | 11 | 7 | 10 | 13 | 12 | 23 | 9 | 11 | 11 | 15 | 22 | 24 | 17 | 23 | 14 | 17 | 17 | 15 | 18 | 17 | 10 | 16 | 18 | 21 | 19 | 14 | 21 | 18 | 12 | 13 | 19 | 20 | 26 | 23 | 19 | 14 | 16 | 11 | 17 | 12 | 10 | 9 | 11 | 6 | 10 | 9 | 10 |
| agc | agc | 823 | 46.6 | 49 | 5.7e-01 | 36 | -1.56 | 34 | 10 | 12 | 7 | 9 | 12 | 8 | 8 | 9 | 9 | 17 | 20 | 13 | 15 | 14 | 17 | 20 | 17 | 24 | 21 | 15 | 21 | 25 | 29 | 29 | 22 | 22 | 20 | 24 | 13 | 16 | 24 | 23 | 22 | 22 | 24 | 20 | 23 | 23 | 22 | 18 | 23 | 16 | 10 | 11 | 9 | 12 | 8 | 5 | 3 | 7 |
| cag | cag | 1200 | 46.0 | 49 | 6.0e-01 | 38 | -1.58 | 35 | 14 | 13 | 13 | 18 | 20 | 15 | 19 | 15 | 13 | 21 | 21 | 24 | 19 | 36 | 26 | 28 | 27 | 25 | 27 | 21 | 31 | 40 | 34 | 36 | 23 | 30 | 33 | 25 | 26 | 24 | 36 | 34 | 33 | 37 | 24 | 27 | 32 | 24 | 34 | 25 | 35 | 26 | 16 | 14 | 15 | 20 | 14 | 11 | 14 | 12 |
| gaa | gaa | 829 | 46.0 | 49 | 6.0e-01 | 38 | -1.58 | 36 | 7 | 10 | 9 | 14 | 18 | 11 | 9 | 15 | 18 | 21 | 17 | 17 | 15 | 19 | 13 | 23 | 22 | 14 | 27 | 26 | 22 | 28 | 25 | 17 | 19 | 21 | 30 | 25 | 22 | 19 | 18 | 10 | 17 | 20 | 17 | 18 | 16 | 13 | 18 | 12 | 17 | 12 | 17 | 18 | 14 | 11 | 9 | 7 | 7 | 5 |
| att | att | 688 | 45.6 | 49 | 6.1e-01 | 39 | -1.59 | 37 | 12 | 4 | 4 | 7 | 9 | 12 | 20 | 13 | 17 | 14 | 11 | 20 | 16 | 19 | 20 | 21 | 16 | 18 | 13 | 18 | 26 | 11 | 14 | 12 | 20 | 12 | 16 | 18 | 14 | 17 | 15 | 16 | 10 | 17 | 22 | 16 | 16 | 11 | 13 | 15 | 11 | 11 | 9 | 8 | 10 | 11 | 13 | 8 | 6 | 6 |
| cca | cca | 887 | 45.5 | 49 | 6.2e-01 | 39 | -1.60 | 38 | 8 | 10 | 10 | 14 | 13 | 16 | 16 | 12 | 13 | 22 | 18 | 15 | 15 | 22 | 15 | 20 | 29 | 18 | 16 | 15 | 27 | 19 | 26 | 21 | 15 | 18 | 24 | 20 | 26 | 14 | 20 | 22 | 28 | 25 | 21 | 21 | 23 | 27 | 21 | 18 | 18 | 25 | 18 | 9 | 9 | 8 | 18 | 11 | 8 | 10 |
| agg | agg | 1021 | 44.8 | 49 | 6.5e-01 | 41 | -1.62 | 39 | 13 | 10 | 9 | 15 | 20 | 15 | 14 | 18 | 14 | 18 | 21 | 25 | 31 | 31 | 27 | 34 | 25 | 17 | 22 | 26 | 27 | 30 | 23 | 34 | 28 | 22 | 28 | 20 | 21 | 25 | 29 | 24 | 21 | 27 | 13 | 15 | 21 | 26 | 24 | 15 | 20 | 17 | 13 | 16 | 15 | 19 | 7 | 13 | 14 | 9 |
| gac | gac | 477 | 44.6 | 49 | 6.5e-01 | 42 | -1.62 | 40 | 4 | 4 | 9 | 9 | 6 | 9 | 9 | 7 | 11 | 11 | 8 | 8 | 17 | 11 | 14 | 10 | 8 | 7 | 15 | 13 | 12 | 15 | 18 | 8 | 9 | 9 | 7 | 8 | 13 | 12 | 10 | 7 | 15 | 9 | 12 | 10 | 9 | 9 | 12 | 9 | 12 | 13 | 7 | 8 | 4 | 14 | 7 | 3 | 4 | 2 |
| gta | gta | 358 | 44.3 | 49 | 6.6e-01 | 43 | -1.63 | 41 | 3 | 5 | 8 | 2 | 5 | 4 | 6 | 11 | 3 | 9 | 12 | 8 | 7 | 8 | 11 | 11 | 5 | 13 | 8 | 6 | 10 | 6 | 4 | 10 | 9 | 6 | 3 | 4 | 7 | 12 | 10 | 11 | 12 | 9 | 5 | 3 | 10 | 6 | 10 | 8 | 9 | 10 | 1 | 7 | 4 | 5 | 4 | 2 | 8 | 8 |
| ctt | ctt | 793 | 43.6 | 49 | 6.9e-01 | 44 | -1.65 | 42 | 11 | 9 | 8 | 10 | 9 | 9 | 6 | 9 | 20 | 12 | 20 | 23 | 14 | 25 | 17 | 15 | 16 | 24 | 24 | 20 | 12 | 13 | 20 | 18 | 18 | 25 | 13 | 20 | 24 | 22 | 16 | 15 | 20 | 22 | 22 | 22 | 18 | 22 | 18 | 19 | 14 | 14 | 17 | 12 | 13 | 5 | 8 | 15 | 6 | 9 |
| tta | tta | 566 | 43.1 | 49 | 7.1e-01 | 45 | -1.66 | 43 | 6 | 6 | 2 | 7 | 8 | 13 | 13 | 11 | 14 | 6 | 11 | 21 | 11 | 16 | 15 | 17 | 17 | 10 | 11 | 16 | 12 | 13 | 13 | 12 | 11 | 14 | 10 | 16 | 17 | 18 | 18 | 11 | 11 | 17 | 10 | 13 | 13 | 7 | 10 | 11 | 12 | 7 | 11 | 6 | 8 | 8 | 13 | 6 | 4 | 3 |
| ttc | ttc | 779 | 42.5 | 49 | 7.3e-01 | 47 | -1.67 | 44 | 9 | 8 | 8 | 12 | 8 | 7 | 13 | 14 | 20 | 14 | 25 | 17 | 13 | 19 | 17 | 19 | 13 | 19 | 30 | 20 | 17 | 14 | 22 | 18 | 19 | 19 | 22 | 21 | 20 | 21 | 17 | 16 | 13 | 22 | 25 | 21 | 19 | 17 | 12 | 20 | 9 | 14 | 10 | 14 | 10 | 8 | 3 | 14 | 8 | 9 |
| gtg | gtg | 784 | 42.0 | 49 | 7.5e-01 | 48 | -1.68 | 45 | 9 | 8 | 15 | 12 | 12 | 16 | 17 | 12 | 11 | 11 | 14 | 26 | 16 | 22 | 16 | 15 | 18 | 28 | 13 | 26 | 20 | 23 | 15 | 22 | 21 | 21 | 18 | 20 | 18 | 15 | 16 | 17 | 24 | 21 | 14 | 16 | 18 | 22 | 20 | 13 | 10 | 13 | 15 | 9 | 9 | 8 | 6 | 7 | 8 | 8 |
| ttg | ttg | 726 | 41.2 | 49 | 7.8e-01 | 50 | -1.70 | 46 | 10 | 5 | 7 | 4 | 7 | 9 | 8 | 12 | 10 | 13 | 9 | 12 | 20 | 18 | 20 | 17 | 18 | 19 | 16 | 17 | 18 | 14 | 9 | 17 | 24 | 20 | 15 | 23 | 17 | 22 | 18 | 23 | 22 | 20 | 21 | 20 | 18 | 17 | 14 | 15 | 14 | 7 | 20 | 7 | 12 | 13 | 11 | 12 | 6 | 6 |
| tcc | tcc | 764 | 40.7 | 49 | 8.0e-01 | 51 | -1.71 | 47 | 7 | 7 | 8 | 12 | 11 | 8 | 14 | 5 | 14 | 17 | 24 | 9 | 18 | 20 | 16 | 15 | 19 | 19 | 18 | 24 | 13 | 12 | 19 | 16 | 23 | 13 | 17 | 17 | 18 | 20 | 16 | 23 | 18 | 19 | 21 | 24 | 19 | 20 | 13 | 19 | 13 | 17 | 15 | 12 | 6 | 10 | 11 | 15 | 10 | 10 |
| tgg | tgg | 932 | 39.9 | 49 | 8.2e-01 | 52 | -1.72 | 48 | 6 | 10 | 14 | 14 | 13 | 16 | 13 | 15 | 12 | 19 | 15 | 15 | 24 | 16 | 26 | 19 | 24 | 20 | 22 | 27 | 21 | 25 | 13 | 24 | 20 | 22 | 17 | 22 | 23 | 31 | 21 | 30 | 27 | 26 | 12 | 23 | 25 | 25 | 21 | 22 | 16 | 14 | 20 | 21 | 19 | 10 | 14 | 10 | 9 | 9 |
| caa | caa | 632 | 39.7 | 49 | 8.3e-01 | 53 | -1.72 | 49 | 7 | 4 | 6 | 5 | 3 | 11 | 13 | 10 | 12 | 9 | 16 | 8 | 14 | 18 | 19 | 9 | 14 | 22 | 17 | 15 | 19 | 19 | 14 | 22 | 12 | 15 | 19 | 14 | 18 | 15 | 16 | 12 | 18 | 10 | 22 | 15 | 15 | 18 | 11 | 15 | 9 | 8 | 9 | 11 | 5 | 7 | 7 | 9 | 7 | 9 |
| aag | aag | 836 | 39.2 | 49 | 8.4e-01 | 54 | -1.73 | 50 | 5 | 11 | 12 | 13 | 9 | 11 | 9 | 20 | 15 | 22 | 23 | 19 | 17 | 20 | 19 | 21 | 20 | 22 | 27 | 26 | 21 | 22 | 17 | 24 | 20 | 16 | 28 | 23 | 20 | 19 | 16 | 13 | 16 | 18 | 20 | 20 | 19 | 19 | 11 | 9 | 16 | 14 | 11 | 19 | 13 | 10 | 12 | 9 | 13 | 7 |
| agt | agt | 616 | 36.6 | 49 | 9.0e-01 | 58 | -1.76 | 51 | 4 | 10 | 11 | 5 | 9 | 8 | 11 | 13 | 12 | 8 | 15 | 17 | 10 | 13 | 14 | 13 | 15 | 15 | 11 | 18 | 15 | 13 | 10 | 18 | 13 | 20 | 15 | 13 | 19 | 17 | 21 | 14 | 16 | 19 | 6 | 16 | 13 | 12 | 15 | 12 | 13 | 13 | 7 | 12 | 10 | 6 | 6 | 4 | 11 | 5 |
| taa | taa | 545 | 36.4 | 49 | 9.1e-01 | 58 | -1.76 | 52 | 3 | 9 | 8 | 5 | 10 | 11 | 11 | 12 | 13 | 15 | 19 | 11 | 12 | 13 | 14 | 17 | 16 | 16 | 10 | 12 | 16 | 12 | 7 | 9 | 13 | 15 | 13 | 14 | 13 | 11 | 14 | 19 | 10 | 13 | 11 | 8 | 12 | 10 | 9 | 8 | 7 | 9 | 9 | 5 | 11 | 7 | 8 | 5 | 7 | 3 |
| atc | atc | 474 | 35.5 | 49 | 9.3e-01 | 59 | -1.77 | 53 | 8 | 3 | 2 | 7 | 9 | 5 | 8 | 10 | 8 | 5 | 7 | 11 | 10 | 10 | 10 | 13 | 16 | 11 | 18 | 9 | 12 | 12 | 14 | 11 | 12 | 13 | 11 | 8 | 14 | 8 | 10 | 7 | 8 | 6 | 14 | 14 | 8 | 14 | 11 | 10 | 6 | 11 | 12 | 8 | 5 | 11 | 8 | 7 | 5 | 4 |
| tac | tac | 358 | 35.0 | 49 | 9.3e-01 | 60 | -1.78 | 54 | 1 | 4 | 10 | 4 | 3 | 7 | 7 | 6 | 8 | 7 | 4 | 9 | 5 | 12 | 8 | 7 | 10 | 9 | 9 | 6 | 7 | 5 | 7 | 9 | 9 | 4 | 7 | 10 | 11 | 8 | 6 | 15 | 5 | 7 | 12 | 7 | 12 | 5 | 11 | 7 | 11 | 3 | 10 | 3 | 7 | 3 | 6 | 5 | 5 | 5 |
| cgg | cgg | 244 | 32.6 | 49 | 9.7e-01 | 62 | -1.79 | 55 | 4 | 2 | 3 | 4 | 4 | 3 | 5 | 5 | 1 | 4 | 4 | 10 | 5 | 4 | 3 | 4 | 3 | 3 | 6 | 2 | 3 | 4 | 4 | 3 | 5 | 9 | 8 | 6 | 7 | 5 | 8 | 6 | 8 | 7 | 5 | 4 | 9 | 6 | 12 | 4 | 9 | 5 | 4 | 4 | 3 | 1 | 6 | 6 | 0 | 4 |
| aac | aac | 483 | 32.5 | 49 | 9.7e-01 | 62 | -1.79 | 56 | 5 | 4 | 7 | 2 | 8 | 10 | 6 | 8 | 11 | 8 | 11 | 7 | 13 | 14 | 13 | 7 | 11 | 11 | 10 | 9 | 8 | 21 | 12 | 12 | 14 | 14 | 16 | 9 | 14 | 10 | 12 | 17 | 12 | 8 | 11 | 9 | 10 | 14 | 8 | 8 | 9 | 8 | 12 | 8 | 6 | 7 | 4 | 6 | 5 | 4 |
| aat | aat | 689 | 32.2 | 49 | 9.7e-01 | 62 | -1.79 | 57 | 7 | 8 | 6 | 6 | 14 | 13 | 14 | 14 | 13 | 15 | 18 | 12 | 14 | 13 | 18 | 17 | 23 | 19 | 13 | 23 | 20 | 17 | 18 | 15 | 13 | 17 | 19 | 21 | 21 | 16 | 19 | 11 | 17 | 16 | 15 | 18 | 12 | 10 | 22 | 11 | 11 | 8 | 11 | 8 | 10 | 9 | 6 | 7 | 5 | 6 |
| cgc | cgc | 213 | 27.8 | 49 | 9.9e-01 | 64 | -1.80 | 58 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 4 | 2 | 1 | 3 | 2 | 1 | 3 | 5 | 4 | 11 | 7 | 2 | 4 | 5 | 1 | 5 | 10 | 6 | 8 | 4 | 4 | 10 | 5 | 5 | 2 | 6 | 4 | 6 | 4 | 4 | 10 | 7 | 8 | 8 | 5 | 3 | 6 | 5 | 2 | 3 | 5 | 1 | 0 |
| gcg | gcg | 229 | 23.9 | 49 | 1.0e+00 | 64 | -1.81 | 59 | 5 | 6 | 4 | 2 | 4 | 1 | 2 | 4 | 3 | 1 | 1 | 6 | 1 | 2 | 2 | 4 | 9 | 5 | 8 | 3 | 6 | 3 | 8 | 8 | 4 | 9 | 7 | 4 | 6 | 5 | 7 | 2 | 7 | 5 | 7 | 6 | 7 | 7 | 8 | 7 | 5 | 4 | 4 | 1 | 3 | 3 | 6 | 3 | 0 | 4 |
| ccg | ccg | 210 | 12.0 | 49 | 1.0e+00 | 64 | -1.81 | 60 | 0 | 0 | 2 | 2 | 2 | 3 | 2 | 6 | 2 | 6 | 4 | 6 | 4 | 4 | 2 | 5 | 4 | 5 | 5 | 5 | 4 | 8 | 2 | 6 | 6 | 3 | 3 | 4 | 4 | 6 | 7 | 4 | 6 | 6 | 4 | 8 | 8 | 6 | 8 | 5 | 8 | 4 | 5 | 4 | 1 | 2 | 3 | 3 | 2 | 1 |
| cgt | cgt | 139 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 61 | 1 | 1 | 2 | 3 | 3 | 4 | 3 | 2 | 3 | 4 | 1 | 3 | 3 | 0 | 2 | 3 | 2 | 1 | 4 | 2 | 4 | 10 | 4 | 1 | 4 | 2 | 0 | 4 | 1 | 6 | 6 | 3 | 3 | 3 | 1 | 6 | 4 | 4 | 3 | 2 | 4 | 3 | 4 | 0 | 2 | 1 | 0 | 1 | 2 | 4 |
| tcg | tcg | 149 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 62 | 2 | 0 | 2 | 3 | 2 | 1 | 3 | 1 | 3 | 1 | 1 | 5 | 2 | 1 | 2 | 0 | 6 | 1 | 3 | 4 | 4 | 5 | 3 | 3 | 5 | 5 | 4 | 3 | 5 | 4 | 2 | 4 | 3 | 2 | 3 | 4 | 3 | 8 | 4 | 5 | 6 | 2 | 1 | 4 | 3 | 2 | 2 | 5 | 1 | 1 |
| cga | cga | 129 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 63 | 0 | 3 | 3 | 0 | 3 | 0 | 0 | 2 | 2 | 0 | 1 | 4 | 4 | 1 | 3 | 2 | 3 | 2 | 5 | 7 | 3 | 4 | 2 | 6 | 1 | 5 | 6 | 3 | 1 | 3 | 3 | 1 | 1 | 0 | 6 | 5 | 2 | 4 | 2 | 6 | 1 | 2 | 3 | 1 | 1 | 6 | 3 | 0 | 1 | 2 |
| acg | acg | 136 | 0.0 | 49 | 1.0e+00 | 64 | -1.81 | 64 | 2 | 2 | 2 | 1 | 2 | 3 | 2 | 2 | 0 | 1 | 3 | 3 | 5 | 3 | 5 | 4 | 2 | 1 | 1 | 2 | 2 | 2 | 3 | 3 | 2 | 8 | 1 | 5 | 5 | 3 | 6 | 4 | 1 | 1 | 4 | 1 | 2 | 3 | 3 | 2 | 6 | 4 | 4 | 2 | 3 | 3 | 1 | 2 | 1 | 3 |
Host name rsat Job started 2025-05-16.184351 Job done 2025-05-16.184351 Seconds 0.45 user 0.45 system 0.01 cuser 0 ; csystem 0