One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/results/discovered_motifs/oligos_6nt_mkv2_m4/peak-motifs_oligos_6nt_mkv2_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/05/16/peak-motifs.2025-05-16.184343_2025-05-16.184343_1fYTf9/results/discovered_motifs/oligos_6nt_mkv2_m4/peak-motifs_oligos_6nt_mkv2_m4_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv2_m4_shift5 ; 28 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv2_m4_shift5 (oligos_6nt_mkv2_m4)
; oligos_6nt_mkv2_m4; m=0 (reference); ncol1=10; shift=5; ncol=15; -----ysCCTCCCws ; Alignment reference a 0 0 0 0 0 24 15 1 0 5 4 2 0 32 30 c 0 0 0 0 0 37 50 123 123 0 120 119 124 28 43 g 0 0 0 0 0 29 41 3 2 7 1 6 3 27 32 t 0 0 0 0 0 37 21 0 2 115 2 0 0 40 22

MA1653.2_shift5 (ZNF148)
; oligos_6nt_mkv2_m4 versus MA1653.2 (ZNF148); m=1/27; ncol2=10; w=0; offset=0; strand=D; shift=5; score=0.854376; -----CCCCTCCCcc ; cor=; Ncor= a 0 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 c 0 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 g 0 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 t 0 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0

MA1630.3_rc_shift5 (ZNF281_rc)
; oligos_6nt_mkv2_m4 versus MA1630.3_rc (ZNF281_rc); m=2/27; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.780065; -----CCCCTCCCCC ; cor=; Ncor= a 0 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 c 0 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 g 0 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 t 0 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0

MA0685.2_rc_shift5 (SP4_rc)
; oligos_6nt_mkv2_m4 versus MA0685.2_rc (SP4_rc); m=3/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.710686; -----CyCCKCCCc- ; cor=; Ncor= a 0 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 c 0 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 g 0 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 t 0 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0

MA1961.2_rc_shift4 (PATZ1_rc)
; oligos_6nt_mkv2_m4 versus MA1961.2_rc (PATZ1_rc); m=4/27; ncol2=11; w=-1; offset=-1; strand=R; shift=4; score=0.710078; ----sCCCCkCCCCs ; cor=; Ncor= a 0 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 c 0 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 g 0 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 t 0 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0

MA0079.5_rc_shift5 (SP1_rc)
; oligos_6nt_mkv2_m4 versus MA0079.5_rc (SP1_rc); m=5/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.697617; -----CyCCKCCCC- ; cor=; Ncor= a 0 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 c 0 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 g 0 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 t 0 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0

MA1522.2_shift5 (MAZ)
; oligos_6nt_mkv2_m4 versus MA1522.2 (MAZ); m=6/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.691999; -----CCCCTCCc-- ; cor=; Ncor= a 0 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 c 0 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 g 0 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 t 0 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0

MA0516.3_rc_shift5 (SP2_rc)
; oligos_6nt_mkv2_m4 versus MA0516.3_rc (SP2_rc); m=7/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.677832; -----cCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 c 0 0 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 g 0 0 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 t 0 0 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0

MA0740.2_rc_shift5 (KLF14_rc)
; oligos_6nt_mkv2_m4 versus MA0740.2_rc (KLF14_rc); m=8/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.668999; -----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0

MA0599.1_shift4 (KLF5)
; oligos_6nt_mkv2_m4 versus MA0599.1 (KLF5); m=9/27; ncol2=10; w=-1; offset=-1; strand=D; shift=4; score=0.656292; ----gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0

MA1511.2_rc_shift5 (KLF10_rc)
; oligos_6nt_mkv2_m4 versus MA1511.2_rc (KLF10_rc); m=10/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.63259; -----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0

MA0528.3_rc_shift6 (ZNF263_rc)
; oligos_6nt_mkv2_m4 versus MA0528.3_rc (ZNF263_rc); m=11/27; ncol2=7; w=0; offset=1; strand=R; shift=6; score=0.631577; ------TCCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 638.0 717.0 1672.0 620.0 986.0 1192.0 1270.0 0 0 c 0 0 0 0 0 0 1448.0 52741.0 52875.0 163.0 53435.0 52818.0 51804.0 0 0 g 0 0 0 0 0 0 1758.0 2190.0 966.0 1660.0 972.0 1544.0 1659.0 0 0 t 0 0 0 0 0 0 52499.0 695.0 830.0 53900.0 950.0 789.0 1610.0 0 0

MA0493.3_rc_shift5 (KLF1_rc)
; oligos_6nt_mkv2_m4 versus MA0493.3_rc (KLF1_rc); m=12/27; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.603957; -----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0

MA1513.2_shift5 (KLF15)
; oligos_6nt_mkv2_m4 versus MA1513.2 (KLF15); m=13/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.603011; -----cCCCGCCC-- ; cor=; Ncor= a 0 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 c 0 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 g 0 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 t 0 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0

MA1965.2_shift7 (SP5)
; oligos_6nt_mkv2_m4 versus MA1965.2 (SP5); m=14/27; ncol2=6; w=0; offset=2; strand=D; shift=7; score=0.59943; -------CCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 c 0 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 g 0 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 t 0 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0

MA1959.2_rc_shift5 (KLF7_rc)
; oligos_6nt_mkv2_m4 versus MA1959.2_rc (KLF7_rc); m=15/27; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.594844; -----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0

MA0039.5_shift5 (KLF4)
; oligos_6nt_mkv2_m4 versus MA0039.5 (KLF4); m=16/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.593587; -----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0

MA1627.2_shift7 (Wt1)
; oligos_6nt_mkv2_m4 versus MA1627.2 (Wt1); m=17/27; ncol2=10; w=0; offset=2; strand=D; shift=7; score=0.575781; -------cCTCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 c 0 0 0 0 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 g 0 0 0 0 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 t 0 0 0 0 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0

MA1596.1_shift0 (ZNF460)
; oligos_6nt_mkv2_m4 versus MA1596.1 (ZNF460); m=18/27; ncol2=16; w=-5; offset=-5; strand=D; shift=0; score=0.551377; rCCTCmGCCTCCCrr ; cor=; Ncor= a 412.0 49.0 19.0 27.0 17.0 851.0 61.0 6.0 1.0 13.0 3.0 5.0 12.0 516.0 987.0 c 131.0 1264.0 1460.0 218.0 1519.0 495.0 23.0 1588.0 1596.0 12.0 1584.0 1583.0 1533.0 110.0 175.0 g 1023.0 185.0 67.0 83.0 47.0 181.0 1493.0 7.0 9.0 17.0 15.0 15.0 27.0 930.0 421.0 t 46.0 114.0 66.0 1284.0 29.0 85.0 35.0 11.0 6.0 1570.0 10.0 9.0 40.0 56.0 29.0

MA1587.1_shift1 (ZNF135)
; oligos_6nt_mkv2_m4 versus MA1587.1 (ZNF135); m=19/27; ncol2=14; w=-4; offset=-4; strand=D; shift=1; score=0.517008; -cCTCGACCTCCyrr ; cor=; Ncor= a 0 49.0 16.0 4.0 7.0 60.0 886.0 17.0 1.0 1.0 3.0 36.0 55.0 303.0 449.0 c 0 595.0 858.0 37.0 772.0 25.0 3.0 896.0 939.0 6.0 936.0 800.0 399.0 66.0 35.0 g 0 122.0 22.0 15.0 10.0 862.0 52.0 26.0 2.0 2.0 6.0 7.0 48.0 523.0 421.0 t 0 182.0 52.0 892.0 159.0 1.0 7.0 9.0 6.0 939.0 3.0 105.0 446.0 56.0 43.0

MA2099.1_shift4 (ZNF770)
; oligos_6nt_mkv2_m4 versus MA2099.1 (ZNF770); m=20/27; ncol2=8; w=-1; offset=-1; strand=D; shift=4; score=0.482841; ----CrGCCTCm--- ; cor=; Ncor= a 0 0 0 0 292.0 3968.0 179.0 101.0 37.0 87.0 35.0 9257.0 0 0 0 c 0 0 0 0 12613.0 857.0 79.0 13393.0 14096.0 140.0 14154.0 3865.0 0 0 0 g 0 0 0 0 374.0 9119.0 13947.0 681.0 133.0 215.0 86.0 485.0 0 0 0 t 0 0 0 0 1052.0 387.0 126.0 156.0 65.0 13889.0 56.0 724.0 0 0 0

MA1578.2_shift7 (VEZF1)
; oligos_6nt_mkv2_m4 versus MA1578.2 (VEZF1); m=21/27; ncol2=6; w=0; offset=2; strand=D; shift=7; score=0.459495; -------CCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 c 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 g 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0

MA0471.3_rc_shift4 (E2F6_rc)
; oligos_6nt_mkv2_m4 versus MA0471.3_rc (E2F6_rc); m=22/27; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.45873; ----TTCCCGCC--- ; cor=; Ncor= a 0 0 0 0 757.0 268.0 296.0 353.0 813.0 2125.0 205.0 453.0 0 0 0 c 0 0 0 0 5021.0 2322.0 31614.0 31973.0 30573.0 693.0 31790.0 29387.0 0 0 0 g 0 0 0 0 1595.0 1171.0 834.0 434.0 539.0 26424.0 837.0 1148.0 0 0 0 t 0 0 0 0 25725.0 29337.0 354.0 338.0 1173.0 3856.0 266.0 2110.0 0 0 0

MA1652.2_rc_shift3 (ZKSCAN5_rc)
; oligos_6nt_mkv2_m4 versus MA1652.2_rc (ZKSCAN5_rc); m=23/27; ncol2=9; w=-2; offset=-2; strand=R; shift=3; score=0.438765; ---cTCACyTCC--- ; cor=; Ncor= a 0 0 0 548.0 25.0 9.0 3092.0 49.0 27.0 19.0 26.0 50.0 0 0 0 c 0 0 0 2034.0 62.0 3251.0 76.0 3149.0 1827.0 47.0 3236.0 3111.0 0 0 0 g 0 0 0 370.0 41.0 24.0 86.0 37.0 27.0 62.0 27.0 30.0 0 0 0 t 0 0 0 375.0 3199.0 43.0 73.0 92.0 1446.0 3199.0 38.0 136.0 0 0 0

MA1723.2_rc_shift1 (PRDM9_rc)
; oligos_6nt_mkv2_m4 versus MA1723.2_rc (PRDM9_rc); m=24/27; ncol2=20; w=-4; offset=-4; strand=R; shift=1; score=0.427104; -yTkyykCCyCCcTk ; cor=; Ncor= a 0 29.0 46.0 204.0 186.0 151.0 151.0 2.0 2.0 116.0 37.0 11.0 107.0 11.0 107.0 c 0 572.0 169.0 107.0 441.0 274.0 204.0 976.0 993.0 344.0 932.0 853.0 529.0 204.0 213.0 g 0 81.0 2.0 423.0 2.0 178.0 292.0 2.0 2.0 90.0 2.0 11.0 204.0 11.0 379.0 t 0 318.0 783.0 265.0 371.0 397.0 353.0 20.0 2.0 450.0 29.0 125.0 160.0 774.0 300.0

MA1637.2_rc_shift9 (EBF3_rc)
; oligos_6nt_mkv2_m4 versus MA1637.2_rc (EBF3_rc); m=25/27; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.407883; ---------TCCCTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 1596.0 463.0 362.0 99.0 1612.0 1903.0 c 0 0 0 0 0 0 0 0 0 1985.0 20515.0 20589.0 21188.0 3374.0 1436.0 g 0 0 0 0 0 0 0 0 0 1819.0 515.0 230.0 260.0 1150.0 3634.0 t 0 0 0 0 0 0 0 0 0 16662.0 569.0 881.0 515.0 15926.0 15089.0

MA1604.2_rc_shift9 (Ebf2_rc)
; oligos_6nt_mkv2_m4 versus MA1604.2_rc (Ebf2_rc); m=26/27; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.405365; ---------TCCCTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 1321.0 586.0 379.0 182.0 2124.0 1855.0 c 0 0 0 0 0 0 0 0 0 1701.0 24124.0 24386.0 25103.0 3635.0 1427.0 g 0 0 0 0 0 0 0 0 0 1437.0 580.0 220.0 239.0 1347.0 3744.0 t 0 0 0 0 0 0 0 0 0 21802.0 971.0 1276.0 737.0 19155.0 19235.0

MA1710.2_rc_shift1 (ZNF257_rc)
; oligos_6nt_mkv2_m4 versus MA1710.2_rc (ZNF257_rc); m=27/27; ncol2=10; w=-4; offset=-4; strand=R; shift=1; score=0.401091; -cyCTygCCTC---- ; cor=; Ncor= a 0 162.0 1.0 1.0 1.0 1.0 124.0 1.0 1.0 74.0 1.0 0 0 0 0 c 0 625.0 480.0 997.0 166.0 396.0 1.0 997.0 997.0 1.0 997.0 0 0 0 0 g 0 101.0 85.0 1.0 1.0 55.0 637.0 1.0 1.0 1.0 1.0 0 0 0 0 t 0 112.0 434.0 1.0 832.0 549.0 239.0 1.0 1.0 924.0 1.0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv2_m4_shift5 (oligos_6nt_mkv2_m4)				; oligos_6nt_mkv2_m4; m=0 (reference); ncol1=10; shift=5; ncol=15; -----ysCCTCCCws ; Alignment reference a 0 0 0 0 0 24 15 1 0 5 4 2 0 32 30 c 0 0 0 0 0 37 50 123 123 0 120 119 124 28 43 g 0 0 0 0 0 29 41 3 2 7 1 6 3 27 32 t 0 0 0 0 0 37 21 0 2 115 2 0 0 40 22
MA1653.2_shift5 (ZNF148)				; oligos_6nt_mkv2_m4 versus MA1653.2 (ZNF148); m=1/27; ncol2=10; w=0; offset=0; strand=D; shift=5; score=0.854376; -----CCCCTCCCcc ; cor=; Ncor= a 0 0 0 0 0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 c 0 0 0 0 0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 g 0 0 0 0 0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 t 0 0 0 0 0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0
MA1630.3_rc_shift5 (ZNF281_rc)				; oligos_6nt_mkv2_m4 versus MA1630.3_rc (ZNF281_rc); m=2/27; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.780065; -----CCCCTCCCCC ; cor=; Ncor= a 0 0 0 0 0 7.0 18.0 1.0 105.0 96.0 1.0 1.0 1.0 1.0 1.0 c 0 0 0 0 0 920.0 940.0 998.0 772.0 1.0 998.0 998.0 963.0 998.0 998.0 g 0 0 0 0 0 27.0 1.0 1.0 1.0 183.0 1.0 1.0 1.0 1.0 1.0 t 0 0 0 0 0 47.0 41.0 1.0 122.0 720.0 1.0 1.0 35.0 1.0 1.0
MA0685.2_rc_shift5 (SP4_rc)				; oligos_6nt_mkv2_m4 versus MA0685.2_rc (SP4_rc); m=3/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.710686; -----CyCCKCCCc- ; cor=; Ncor= a 0 0 0 0 0 0.686813 50.1374 77.6099 0.686813 0.686813 0.686813 0.686813 0.686813 195.742 0 c 0 0 0 0 0 997.94 660.027 921.016 997.94 0.686813 997.94 997.94 997.94 654.533 0 g 0 0 0 0 0 0.686813 0.686813 0.686813 0.686813 723.214 0.686813 0.686813 0.686813 0.686813 0 t 0 0 0 0 0 0.686813 289.148 0.686813 0.686813 275.412 0.686813 0.686813 0.686813 149.038 0
MA1961.2_rc_shift4 (PATZ1_rc)				; oligos_6nt_mkv2_m4 versus MA1961.2_rc (PATZ1_rc); m=4/27; ncol2=11; w=-1; offset=-1; strand=R; shift=4; score=0.710078; ----sCCCCkCCCCs ; cor=; Ncor= a 0 0 0 0 34.0 1.0 1.0 1.0 1.0 155.0 1.0 1.0 1.0 24.0 44.0 c 0 0 0 0 523.0 944.0 964.0 957.0 997.0 1.0 997.0 997.0 727.0 680.0 543.0 g 0 0 0 0 392.0 1.0 34.0 41.0 1.0 489.0 1.0 1.0 78.0 228.0 288.0 t 0 0 0 0 51.0 54.0 1.0 1.0 1.0 355.0 1.0 1.0 195.0 68.0 125.0
MA0079.5_rc_shift5 (SP1_rc)				; oligos_6nt_mkv2_m4 versus MA0079.5_rc (SP1_rc); m=5/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.697617; -----CyCCKCCCC- ; cor=; Ncor= a 0 0 0 0 0 1.05485 34.8101 1.05485 1.05485 1.05485 1.05485 1.05485 1.05485 47.4684 0 c 0 0 0 0 0 836.498 659.283 912.447 996.835 1.05485 996.835 996.835 996.835 950.422 0 g 0 0 0 0 0 1.05485 51.6878 85.443 1.05485 731.013 1.05485 1.05485 1.05485 1.05485 0 t 0 0 0 0 0 161.392 254.219 1.05485 1.05485 266.878 1.05485 1.05485 1.05485 1.05485 0
MA1522.2_shift5 (MAZ)				; oligos_6nt_mkv2_m4 versus MA1522.2 (MAZ); m=6/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.691999; -----CCCCTCCc-- ; cor=; Ncor= a 0 0 0 0 0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 0 0 c 0 0 0 0 0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 0 0 g 0 0 0 0 0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 0 0 t 0 0 0 0 0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 0 0
MA0516.3_rc_shift5 (SP2_rc)				; oligos_6nt_mkv2_m4 versus MA0516.3_rc (SP2_rc); m=7/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.677832; -----cCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 0 18.3284 0.733138 24.1935 0.733138 0.733138 0.733138 0.733138 0.733138 79.912 0 c 0 0 0 0 0 610.704 877.566 974.34 997.801 0.733138 997.801 997.801 830.645 766.129 0 g 0 0 0 0 0 164.956 0.733138 0.733138 0.733138 886.364 0.733138 0.733138 0.733138 0.733138 0 t 0 0 0 0 0 206.012 120.968 0.733138 0.733138 112.17 0.733138 0.733138 167.889 153.226 0
MA0740.2_rc_shift5 (KLF14_rc)				; oligos_6nt_mkv2_m4 versus MA0740.2_rc (KLF14_rc); m=8/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.668999; -----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0
MA0599.1_shift4 (KLF5)				; oligos_6nt_mkv2_m4 versus MA0599.1 (KLF5); m=9/27; ncol2=10; w=-1; offset=-1; strand=D; shift=4; score=0.656292; ----gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0
MA1511.2_rc_shift5 (KLF10_rc)				; oligos_6nt_mkv2_m4 versus MA1511.2_rc (KLF10_rc); m=10/27; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.63259; -----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0
MA0528.3_rc_shift6 (ZNF263_rc)				; oligos_6nt_mkv2_m4 versus MA0528.3_rc (ZNF263_rc); m=11/27; ncol2=7; w=0; offset=1; strand=R; shift=6; score=0.631577; ------TCCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 638.0 717.0 1672.0 620.0 986.0 1192.0 1270.0 0 0 c 0 0 0 0 0 0 1448.0 52741.0 52875.0 163.0 53435.0 52818.0 51804.0 0 0 g 0 0 0 0 0 0 1758.0 2190.0 966.0 1660.0 972.0 1544.0 1659.0 0 0 t 0 0 0 0 0 0 52499.0 695.0 830.0 53900.0 950.0 789.0 1610.0 0 0
MA0493.3_rc_shift5 (KLF1_rc)				; oligos_6nt_mkv2_m4 versus MA0493.3_rc (KLF1_rc); m=12/27; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.603957; -----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0
MA1513.2_shift5 (KLF15)				; oligos_6nt_mkv2_m4 versus MA1513.2 (KLF15); m=13/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.603011; -----cCCCGCCC-- ; cor=; Ncor= a 0 0 0 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 c 0 0 0 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 g 0 0 0 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 t 0 0 0 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0
MA1965.2_shift7 (SP5)				; oligos_6nt_mkv2_m4 versus MA1965.2 (SP5); m=14/27; ncol2=6; w=0; offset=2; strand=D; shift=7; score=0.59943; -------CCTCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.0 7.0 0.0 47.0 11.0 0.0 0 0 c 0 0 0 0 0 0 0 20683.0 20286.0 0.0 20649.0 20451.0 20604.0 0 0 g 0 0 0 0 0 0 0 3.0 403.0 231.0 0.0 234.0 92.0 0 0 t 0 0 0 0 0 0 0 4.0 0.0 20465.0 0.0 0.0 0.0 0 0
MA1959.2_rc_shift5 (KLF7_rc)				; oligos_6nt_mkv2_m4 versus MA1959.2_rc (KLF7_rc); m=15/27; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.594844; -----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0
MA0039.5_shift5 (KLF4)				; oligos_6nt_mkv2_m4 versus MA0039.5 (KLF4); m=16/27; ncol2=8; w=0; offset=0; strand=D; shift=5; score=0.593587; -----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0
MA1627.2_shift7 (Wt1)				; oligos_6nt_mkv2_m4 versus MA1627.2 (Wt1); m=17/27; ncol2=10; w=0; offset=2; strand=D; shift=7; score=0.575781; -------cCTCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 c 0 0 0 0 0 0 0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 g 0 0 0 0 0 0 0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 t 0 0 0 0 0 0 0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0
MA1596.1_shift0 (ZNF460)				; oligos_6nt_mkv2_m4 versus MA1596.1 (ZNF460); m=18/27; ncol2=16; w=-5; offset=-5; strand=D; shift=0; score=0.551377; rCCTCmGCCTCCCrr ; cor=; Ncor= a 412.0 49.0 19.0 27.0 17.0 851.0 61.0 6.0 1.0 13.0 3.0 5.0 12.0 516.0 987.0 c 131.0 1264.0 1460.0 218.0 1519.0 495.0 23.0 1588.0 1596.0 12.0 1584.0 1583.0 1533.0 110.0 175.0 g 1023.0 185.0 67.0 83.0 47.0 181.0 1493.0 7.0 9.0 17.0 15.0 15.0 27.0 930.0 421.0 t 46.0 114.0 66.0 1284.0 29.0 85.0 35.0 11.0 6.0 1570.0 10.0 9.0 40.0 56.0 29.0
MA1587.1_shift1 (ZNF135)				; oligos_6nt_mkv2_m4 versus MA1587.1 (ZNF135); m=19/27; ncol2=14; w=-4; offset=-4; strand=D; shift=1; score=0.517008; -cCTCGACCTCCyrr ; cor=; Ncor= a 0 49.0 16.0 4.0 7.0 60.0 886.0 17.0 1.0 1.0 3.0 36.0 55.0 303.0 449.0 c 0 595.0 858.0 37.0 772.0 25.0 3.0 896.0 939.0 6.0 936.0 800.0 399.0 66.0 35.0 g 0 122.0 22.0 15.0 10.0 862.0 52.0 26.0 2.0 2.0 6.0 7.0 48.0 523.0 421.0 t 0 182.0 52.0 892.0 159.0 1.0 7.0 9.0 6.0 939.0 3.0 105.0 446.0 56.0 43.0
MA2099.1_shift4 (ZNF770)				; oligos_6nt_mkv2_m4 versus MA2099.1 (ZNF770); m=20/27; ncol2=8; w=-1; offset=-1; strand=D; shift=4; score=0.482841; ----CrGCCTCm--- ; cor=; Ncor= a 0 0 0 0 292.0 3968.0 179.0 101.0 37.0 87.0 35.0 9257.0 0 0 0 c 0 0 0 0 12613.0 857.0 79.0 13393.0 14096.0 140.0 14154.0 3865.0 0 0 0 g 0 0 0 0 374.0 9119.0 13947.0 681.0 133.0 215.0 86.0 485.0 0 0 0 t 0 0 0 0 1052.0 387.0 126.0 156.0 65.0 13889.0 56.0 724.0 0 0 0
MA1578.2_shift7 (VEZF1)				; oligos_6nt_mkv2_m4 versus MA1578.2 (VEZF1); m=21/27; ncol2=6; w=0; offset=2; strand=D; shift=7; score=0.459495; -------CCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 0 0 c 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 0 0 g 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 0 0
MA0471.3_rc_shift4 (E2F6_rc)				; oligos_6nt_mkv2_m4 versus MA0471.3_rc (E2F6_rc); m=22/27; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.45873; ----TTCCCGCC--- ; cor=; Ncor= a 0 0 0 0 757.0 268.0 296.0 353.0 813.0 2125.0 205.0 453.0 0 0 0 c 0 0 0 0 5021.0 2322.0 31614.0 31973.0 30573.0 693.0 31790.0 29387.0 0 0 0 g 0 0 0 0 1595.0 1171.0 834.0 434.0 539.0 26424.0 837.0 1148.0 0 0 0 t 0 0 0 0 25725.0 29337.0 354.0 338.0 1173.0 3856.0 266.0 2110.0 0 0 0
MA1652.2_rc_shift3 (ZKSCAN5_rc)				; oligos_6nt_mkv2_m4 versus MA1652.2_rc (ZKSCAN5_rc); m=23/27; ncol2=9; w=-2; offset=-2; strand=R; shift=3; score=0.438765; ---cTCACyTCC--- ; cor=; Ncor= a 0 0 0 548.0 25.0 9.0 3092.0 49.0 27.0 19.0 26.0 50.0 0 0 0 c 0 0 0 2034.0 62.0 3251.0 76.0 3149.0 1827.0 47.0 3236.0 3111.0 0 0 0 g 0 0 0 370.0 41.0 24.0 86.0 37.0 27.0 62.0 27.0 30.0 0 0 0 t 0 0 0 375.0 3199.0 43.0 73.0 92.0 1446.0 3199.0 38.0 136.0 0 0 0
MA1723.2_rc_shift1 (PRDM9_rc)				; oligos_6nt_mkv2_m4 versus MA1723.2_rc (PRDM9_rc); m=24/27; ncol2=20; w=-4; offset=-4; strand=R; shift=1; score=0.427104; -yTkyykCCyCCcTk ; cor=; Ncor= a 0 29.0 46.0 204.0 186.0 151.0 151.0 2.0 2.0 116.0 37.0 11.0 107.0 11.0 107.0 c 0 572.0 169.0 107.0 441.0 274.0 204.0 976.0 993.0 344.0 932.0 853.0 529.0 204.0 213.0 g 0 81.0 2.0 423.0 2.0 178.0 292.0 2.0 2.0 90.0 2.0 11.0 204.0 11.0 379.0 t 0 318.0 783.0 265.0 371.0 397.0 353.0 20.0 2.0 450.0 29.0 125.0 160.0 774.0 300.0
MA1637.2_rc_shift9 (EBF3_rc)				; oligos_6nt_mkv2_m4 versus MA1637.2_rc (EBF3_rc); m=25/27; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.407883; ---------TCCCTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 1596.0 463.0 362.0 99.0 1612.0 1903.0 c 0 0 0 0 0 0 0 0 0 1985.0 20515.0 20589.0 21188.0 3374.0 1436.0 g 0 0 0 0 0 0 0 0 0 1819.0 515.0 230.0 260.0 1150.0 3634.0 t 0 0 0 0 0 0 0 0 0 16662.0 569.0 881.0 515.0 15926.0 15089.0
MA1604.2_rc_shift9 (Ebf2_rc)				; oligos_6nt_mkv2_m4 versus MA1604.2_rc (Ebf2_rc); m=26/27; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.405365; ---------TCCCTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 1321.0 586.0 379.0 182.0 2124.0 1855.0 c 0 0 0 0 0 0 0 0 0 1701.0 24124.0 24386.0 25103.0 3635.0 1427.0 g 0 0 0 0 0 0 0 0 0 1437.0 580.0 220.0 239.0 1347.0 3744.0 t 0 0 0 0 0 0 0 0 0 21802.0 971.0 1276.0 737.0 19155.0 19235.0
MA1710.2_rc_shift1 (ZNF257_rc)				; oligos_6nt_mkv2_m4 versus MA1710.2_rc (ZNF257_rc); m=27/27; ncol2=10; w=-4; offset=-4; strand=R; shift=1; score=0.401091; -cyCTygCCTC---- ; cor=; Ncor= a 0 162.0 1.0 1.0 1.0 1.0 124.0 1.0 1.0 74.0 1.0 0 0 0 0 c 0 625.0 480.0 997.0 166.0 396.0 1.0 997.0 997.0 1.0 997.0 0 0 0 0 g 0 101.0 85.0 1.0 1.0 55.0 637.0 1.0 1.0 1.0 1.0 0 0 0 0 t 0 112.0 434.0 1.0 832.0 549.0 239.0 1.0 1.0 924.0 1.0 0 0 0 0