; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	21	21	3	3	1	54	4	50	10	32	24	22
c	7	4	2	2	0	1	53	1	9	7	10	10
g	9	15	52	49	57	2	1	7	34	6	11	9
t	22	19	2	5	1	2	1	1	6	14	14	18
//
; Sites	59
>site_0
AAGTGACAGAGA
>site_1
ACGGAACGGATA
>site_2
TTGGGACAATAC
>site_3
TTGTGACAGATG
>site_4
TGGGTACAGATT
>site_5
GTGGGACAAAAT
>site_6
AAGGGACACTCT
>site_7
TTGGGCCACACG
>site_8
TGGGGACGGTAT
>site_9
TTGGGACGGGTT
>site_10
ATGGGACACCTA
>site_11
TTGCGACGGAGG
>site_12
TGGGGACAAGAA
>site_13
GGGGGACACTTA
>site_14
AAGGGACAATTA
>site_15
ATGGGATAGTAA
>site_16
AAGGGAAAGAAT
>site_17
ATTGGACAGAGA
>site_18
TCGGGTCGGAAT
>site_19
TAGGGTCAGTTT
>site_20
GAGGGACTGTGA
>site_21
ACGAGACAAATA
>site_22
AAGGGACACCAG
>site_23
AAGGGACATGAA
>site_24
TTGTGACAGAGT
>site_25
CGGCGGCAGAAA
>site_26
AGCGGACGGAAC
>site_27
CAGGGACACCCT
>site_28
ATGGGACACAAC
>site_29
AAAGGACAGAAT
>site_30
TTGGGAAAGAAA
>site_31
AGGGGACAAAAC
>site_32
TGGAGACAGAGC
>site_33
AAGGGAAAGACA
>site_34
TGGTGACAGATC
>site_35
AAGGGACAGATT
>site_36
CAGGGACCGACC
>site_37
CTGAGACAGCTC
>site_38
TCGGGACGGTGG
>site_39
CTGGGGCAGACG
>site_40
GAGGGACAAAGA
>site_41
GAGGGAGAGAAT
>site_42
CAGGGACAACAT
>site_43
TATGGACAGTAC
>site_44
TGGGGACAGTAG
>site_45
TGGGGACAACAA
>site_46
ATGGGACATCAT
>site_47
GGAGGACAGAAA
>site_48
GAGTGACAGAGA
>site_49
GAGGGACATTTC
>site_50
TTGGGACATGTT
>site_51
AGGGGACACACA
>site_52
AAGGGAAAGAAG
>site_53
TAGGGACAATCA
>site_54
AGCGGACACACA
>site_55
TTGGGACAGAGT
>site_56
TTGGGACATGGT
>site_57
CGGGGACATGCA
>site_58
GTAGGACAGTAG
a	22	16	0	55	0	0	55	55	17	20
c	8	8	0	0	0	0	0	0	8	4
g	9	14	0	0	55	0	0	0	16	12
t	16	17	55	0	0	55	0	0	14	19
//
; Sites	55
>site_0
GCTAGTAAGA
>site_1
CATAGTAAGA
>site_2
GTTAGTAAAT
>site_3
GGTAGTAAGT
>site_4
CTTAGTAAAT
>site_5
GATAGTAATT
>site_6
CATAGTAATA
>site_7
AGTAGTAAAT
>site_8
GGTAGTAATT
>site_9
TTTAGTAACT
>site_10
TTTAGTAAAT
>site_11
GATAGTAATA
>site_12
AATAGTAACA
>site_13
AATAGTAACT
>site_14
CCTAGTAAAG
>site_15
AGTAGTAAGA
>site_16
TTTAGTAAGA
>site_17
ATTAGTAAAG
>site_18
AGTAGTAAGA
>site_19
ATTAGTAATT
>site_20
GCTAGTAAAA
>site_21
TGTAGTAAAG
>site_22
CATAGTAATA
>site_23
TCTAGTAACT
>site_24
AATAGTAAGC
>site_25
TTTAGTAACA
>site_26
TCTAGTAATC
>site_27
CATAGTAAAT
>site_28
TATAGTAAAC
>site_29
TTTAGTAATT
>site_30
ATTAGTAAAT
>site_31
AATAGTAAAA
>site_32
TATAGTAAAA
>site_33
AATAGTAATG
>site_34
CTTAGTAAGG
>site_35
AGTAGTAATA
>site_36
AATAGTAATG
>site_37
CTTAGTAATA
>site_38
ATTAGTAAAT
>site_39
TGTAGTAAGA
>site_40
AGTAGTAACA
>site_41
TTTAGTAACA
>site_42
ATTAGTAAGT
>site_43
TATAGTAACA
>site_44
TCTAGTAATT
>site_45
GCTAGTAAGG
>site_46
AGTAGTAAGG
>site_47
AGTAGTAAGG
>site_48
AGTAGTAAGG
>site_49
AATAGTAAAT
>site_50
GGTAGTAAGG
>site_51
ATTAGTAAAG
>site_52
TTTAGTAATT
>site_53
TCTAGTAAAC
>site_54
AGTAGTAAGA
a	16	19	48	0	52	0	46	0	21	15
c	5	3	2	0	0	0	5	0	5	7
g	12	18	2	52	0	1	0	52	10	15
t	19	12	0	0	0	51	1	0	16	15
//
; Sites	52
>site_0
CGAGATTGAC
>site_1
TTAGATAGAT
>site_2
ACAGATAGGA
>site_3
AGAGATAGAG
>site_4
AAAGATAGAA
>site_5
ATAGATAGGT
>site_6
AAAGATAGGG
>site_7
ACGGATAGAC
>site_8
AAAGATAGTT
>site_9
GGAGATAGCA
>site_10
TTAGATAGAC
>site_11
GGAGATCGAT
>site_12
TGAGATAGTG
>site_13
AGAGATAGAT
>site_14
ATAGATCGAA
>site_15
TTAGATAGCA
>site_16
AACGATAGAG
>site_17
TTAGATAGAC
>site_18
CGAGATAGGT
>site_19
TGAGATAGAA
>site_20
CAAGAGAGCG
>site_21
GAAGATCGTT
>site_22
GGAGATAGTT
>site_23
TAAGATAGGA
>site_24
ATAGATAGAG
>site_25
GAAGATAGTA
>site_26
GGAGATAGAG
>site_27
TAAGATAGTG
>site_28
ACGGATAGAA
>site_29
AAAGATAGAG
>site_30
GAAGATAGGT
>site_31
AAAGATAGGA
>site_32
ATAGATAGTC
>site_33
GACGATAGCA
>site_34
TTAGATAGAG
>site_35
GAAGATCGTT
>site_36
CGAGATAGTT
>site_37
AAAGATAGTC
>site_38
TTAGATAGTT
>site_39
TTAGATAGCA
>site_40
GGAGATAGTG
>site_41
TAAGATAGAT
>site_42
TAAGATAGAG
>site_43
TGAGATAGTG
>site_44
TAAGATAGGA
>site_45
TGAGATAGTG
>site_46
TGAGATAGGA
>site_47
CTAGATAGTC
>site_48
TGAGATCGAA
>site_49
GGAGATAGAG
>site_50
GGAGATAGGT
>site_51
TAAGATAGTT
; Host name	rsat
; Job started	2025-05-21.033921
; Job done	2025-05-21.033921
; Seconds	0.11
;	user	0.11
;	system	0.01
;	cuser	0
;	csystem	0
