; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	17	9	1	3	1	40	2	2	43	2	17	20
c	6	12	43	1	3	1	38	1	1	40	8	4
g	4	5	1	0	0	1	2	1	1	2	2	2
t	19	20	1	42	42	4	4	42	1	2	19	20
//
; Sites	46
>site_0
CTCTTAGTACTA
>site_1
GTCTTACTAGCA
>site_2
TTCTTACTATGT
>site_3
ATCTTATTACCA
>site_4
TTCTTGCTACAT
>site_5
CCCTTAGTACTT
>site_6
TACTTACTACCT
>site_7
GTCTCACTACCA
>site_8
AACTTACTTCAG
>site_9
ATCTTAATACTA
>site_10
AAATTACTACCA
>site_11
ACCTTATTACAC
>site_12
TTCTTACAACAG
>site_13
ATCTTACTACTA
>site_14
TTCTTACTAAAT
>site_15
CTCTTACTACTT
>site_16
TCTTTACTACAA
>site_17
TTCTTATTACTA
>site_18
ATCTTACCACAT
>site_19
GGCTTACTATTA
>site_20
CTCTTTCTACTC
>site_21
TCCTTTCTACTT
>site_22
GTCTCACTACCT
>site_23
TGCTTACTCCAA
>site_24
AACTTTCTACAT
>site_25
AACTTACAACTT
>site_26
TTCTTACTACAT
>site_27
ATCATACTACAA
>site_28
TTGTTACTACTA
>site_29
TCCATACTACAT
>site_30
AACTTACTAATT
>site_31
CACTCACTACTT
>site_32
TTCTTTCTACAT
>site_33
TCCTTACTAGCC
>site_34
ACCTTACTACTA
>site_35
ACCTTACTACTA
>site_36
ACCATACTACTA
>site_37
ACCTTACTACTA
>site_38
TGCTAACGACGT
>site_39
TCCTTACTACCT
>site_40
TGCTTACTGCAA
>site_41
AACTTCCTACAT
>site_42
TTCTTACTACTA
>site_43
AGCTTATTACTT
>site_44
TCCCTACTACAA
>site_45
CACTTAATACAC
a	20	14	2	46	44	45	44	4	1	5	26	22
c	9	5	1	0	3	0	0	1	1	38	5	6
g	9	9	43	1	2	2	0	43	45	3	3	5
t	11	21	3	2	0	2	5	1	2	3	15	16
//
; Sites	49
>site_0
CCGAAAAGGCCC
>site_1
GGGAAATGGCTC
>site_2
GGGAGAAGGCTT
>site_3
GAGAAATGGCAA
>site_4
AAGAAAAAGCAA
>site_5
GGGAAAAGGAAG
>site_6
AAGAGAAGGCCT
>site_7
GAGACAAGGCAT
>site_8
GTGACGAGGCGT
>site_9
AGTAAAAGGCTT
>site_10
TTGAAAAGGATA
>site_11
CTGAAAAGACCA
>site_12
GAGAAAAGGTGA
>site_13
ATGAAAAGGGTG
>site_14
ACGAAATCGCAT
>site_15
ATGAAAAGGCAA
>site_16
ATGAAAAGGTAA
>site_17
ATGAAAAGGCAA
>site_18
ATGAAAAGGCAA
>site_19
ATGAAAAGGCAA
>site_20
CCGAAAAGGCCA
>site_21
CTGAAAAAGCTT
>site_22
CGGTATAGGCTT
>site_23
ACGAATAGGCAT
>site_24
TTGAAATGGCTG
>site_25
CTGAAAAGGCAG
>site_26
GGTAAAAGGCAA
>site_27
AAGAAAAGGGTT
>site_28
TAGAAAAAGCAA
>site_29
AAGAAAAGGGTT
>site_30
TACAAAAGGCAC
>site_31
ACAAAAAGGCTA
>site_32
TAGAAAAGGTAA
>site_33
CTGAAGAGGCGA
>site_34
TGGGAAAGGCCC
>site_35
AAGACAAGGCAT
>site_36
ATGAAAAGGCAA
>site_37
TTGAAAAGTCTA
>site_38
TAGAAAAGGAAT
>site_39
TTGAAATGGCTA
>site_40
TGGAAAAAGCAA
>site_41
CTGAAAAGGAAC
>site_42
AATAAAAGGCTT
>site_43
ATGAAAAGCCAG
>site_44
CAAAAAAGGCTT
>site_45
ATGAAAAGTCAC
>site_46
TGGAAAATGCAA
>site_47
ATGTAAAGGCAA
>site_48
GTGAAAAGGAAT
a	12	16	3	3	36	0	5	35	3	35	16	18
c	1	4	0	0	4	0	2	2	1	0	4	2
g	21	6	36	38	0	41	35	3	36	6	10	13
t	8	16	3	1	2	1	0	2	2	1	12	9
//
; Sites	42
>site_0
GAGGAGGAGGAA
>site_1
GAGGAGGAAAGA
>site_2
GAGGAGGAGAAT
>site_3
CTAGAGGCGAAA
>site_4
TAGTAGGAGAAT
>site_5
GTGGAGGAGATC
>site_6
GGGGAGGTGATG
>site_7
TTGGAGGGGATG
>site_8
AAGGATGAGAAA
>site_9
GTTGAGGAGAGA
>site_10
ACGGAGGTGGAA
>site_11
GTTGCGGAGAGA
>site_12
ATGGAGCAGACG
>site_13
TTGGAGGGGAGG
>site_14
ATAGCGGAGAAG
>site_15
GCGGAGAAGATT
>site_16
GAAGAGGCGAAG
>site_17
GAGGCGAAGATG
>site_18
ACGGTGGATATA
>site_19
GTGGAGGATAGA
>site_20
AAGAAGGAGACA
>site_21
ATGGAGGAAAAT
>site_22
TGGGAGCAGAAA
>site_23
TGGGAGGAGAGA
>site_24
AGGAAGGAGAAA
>site_25
GGGGAGAAGAGT
>site_26
AAGGAGGACAGA
>site_27
TTGGAGAAGAAA
>site_28
AAGGAGGAAAGT
>site_29
GTGGAGGAGGAG
>site_30
GTGGAGGAGATT
>site_31
GTGGAGGAGACG
>site_32
GAGGCGGGGATG
>site_33
TTGGTGGAGGCG
>site_34
GAGGAGGAGATT
>site_35
GGGGAGGAGGAG
>site_36
GAGGAGGAGAAT
>site_37
GTGGAGGAGGAG
>site_38
GAGAAGGAGATA
>site_39
AAGGAGGAGTGA
>site_40
TCGGAGAAGATC
>site_41
AATGAGGAGATA
a	18	13	3	1	1	34	4	35	3	36	9	13
c	4	3	0	2	0	0	30	1	2	1	1	5
g	5	6	35	2	37	2	3	2	34	0	15	9
t	12	17	1	34	1	3	2	1	0	2	14	12
//
; Sites	39
>site_0
GAATGACAGAGA
>site_1
AAGTGACAGAGA
>site_2
ATGTGACAAATT
>site_3
TAGTTACAGAAA
>site_4
AAGTGACAGCAA
>site_5
TTGTGACAGATG
>site_6
GTGTGTCAGAGA
>site_7
ATGTGATAGATC
>site_8
ATGTGACAAATA
>site_9
CTGTGACAGTGG
>site_10
TAATGACAGATG
>site_11
TTGCGACGGAGG
>site_12
TTGTGACAGAGT
>site_13
TGGTGAGAGAAG
>site_14
GGGTGGCAGAAG
>site_15
CGGCGGCAGAAA
>site_16
CAGTGAAAGAGG
>site_17
ACGTGTCAGTAT
>site_18
GTGTGAAAGAGA
>site_19
ATGTGAGAGAGA
>site_20
ACGTGAGAGATA
>site_21
TGGAGACAGAGC
>site_22
AAGTGAAAGAGT
>site_23
TTGTGTCAGATG
>site_24
TGGTGACAGATC
>site_25
AAGGGACAGATT
>site_26
AGGTGACTGAGT
>site_27
ATGTGACGGATA
>site_28
TTTTGACAGATT
>site_29
AAGTGAAAGAAT
>site_30
AAGTGACACATG
>site_31
GAGTGACAGAGA
>site_32
AAGTGACACATT
>site_33
ATGTGATAGAGT
>site_34
AAGTGACAAATC
>site_35
ATGTGACCGACC
>site_36
CCATGACAGAAA
>site_37
TTGTAACAGAAT
>site_38
TTGGGACAGAGT
a	15	15	1	9	0	3	35	8	2	40	15	21
c	2	8	0	1	3	0	1	0	0	1	3	4
g	8	15	42	1	37	39	1	34	40	0	16	12
t	18	5	0	32	3	1	6	1	1	2	9	6
//
; Sites	43
>site_0
TCGAGGAGGAGG
>site_1
AGGAGGAGGAAA
>site_2
GTGAGGAGGAGA
>site_3
GTGTGGAGGAGA
>site_4
TAGTTGAGGATT
>site_5
TCGTGGAGGTTA
>site_6
ACGTGGATGAAC
>site_7
TGGTGGGGGACA
>site_8
AAGTGGCGTAAG
>site_9
AAGTTGAGGATT
>site_10
ACGTGGTAGAAG
>site_11
ACGTCGAAGAAA
>site_12
GTGTTGAGGAGA
>site_13
CGGAGGTGGAAG
>site_14
TTGTGGTGGACC
>site_15
TAGTGGAGGTAA
>site_16
ACGTGTAGGATT
>site_17
AAGTGGAAGAAA
>site_18
TAGCGGAGAAGA
>site_19
GAGTGGTAGACG
>site_20
TTGTGGAAGAAT
>site_21
ACGTGGAGAATT
>site_22
TAGTGGAGGAAT
>site_23
TAGTGGAAGAAG
>site_24
ACGTCGAAGAAA
>site_25
CAGACGAGGATA
>site_26
AAGAGGAGGATC
>site_27
AGGTGGAGGATA
>site_28
TAATGGAGGAAA
>site_29
GAGTGAAGGAGG
>site_30
TGGAGGAGGAGA
>site_31
TGGTGGAGGAGG
>site_32
TGGTGGAGGAGA
>site_33
AGGTGGTGGAGG
>site_34
TGGTGGAGGAGA
>site_35
AGGTGGTGGAGG
>site_36
TGGTGGAGGCGG
>site_37
GGGAGGAGGAGA
>site_38
AGGGGGAGGAGG
>site_39
TGGAGGAGGAGA
>site_40
GAGTGGAAGAAA
>site_41
TGGTGAAGGATC
>site_42
GAGTGAAGGAAA
; Host name	rsat
; Job started	2025-05-21.033930
; Job done	2025-05-21.033930
; Seconds	0.14
;	user	0.14
;	system	0.01
;	cuser	0
;	csystem	0
