/var/www/html/rsat/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/data/sequences/peak-motifs_test_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title MEyellowgreen -origin center -offset 200 -o $RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/data/sequences/peak-motifs_test_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/05/21/peak-motifs.2025-05-21.033913_2025-05-21.033913_SwV7J2/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	88
	Sum of sequence lengths      	57750
	Min sequence length          	0
	Max sequence length          	701
	Average sequence length      	656
	Possible positions           	57662
 Sequences:
	#	length	ID
	1	611	gene-Lalb_Chr00c24g0406831
	2	701	gene-Lalb_Chr01g0001801
	3	701	gene-Lalb_Chr01g0008121
	4	701	gene-Lalb_Chr01g0009301
	5	701	gene-Lalb_Chr01g0012001
	6	202	gene-Lalb_Chr01g0016101
	7	701	gene-Lalb_Chr02g0144501
	8	701	gene-Lalb_Chr02g0151961
	9	202	gene-Lalb_Chr02g0152161
	10	701	gene-Lalb_Chr02g0156751
	11	701	gene-Lalb_Chr03g0026011
	12	701	gene-Lalb_Chr03g0035161
	13	701	gene-Lalb_Chr03g0037551
	14	701	gene-Lalb_Chr04g0259191
	15	701	gene-Lalb_Chr04g0260441
	16	701	gene-Lalb_Chr04g0262831
	17	701	gene-Lalb_Chr04g0264021
	18	701	gene-Lalb_Chr05g0214501
	19	585	gene-Lalb_Chr05g0216101
	20	701	gene-Lalb_Chr05g0217101
	21	701	gene-Lalb_Chr05g0217281
	22	701	gene-Lalb_Chr05g0219491
	23	701	gene-Lalb_Chr05g0223341
	24	701	gene-Lalb_Chr05g0227741
	25	203	gene-Lalb_Chr05g0227751
	26	701	gene-Lalb_Chr06g0161461
	27	701	gene-Lalb_Chr06g0161941
	28	701	gene-Lalb_Chr06g0166891
	29	701	gene-Lalb_Chr06g0168661
	30	701	gene-Lalb_Chr07g0178161
	31	701	gene-Lalb_Chr07g0180541
	32	701	gene-Lalb_Chr07g0180821
	33	433	gene-Lalb_Chr07g0180831
	34	701	gene-Lalb_Chr07g0187151
	35	701	gene-Lalb_Chr07g0191031
	36	701	gene-Lalb_Chr07g0192381
	37	701	gene-Lalb_Chr08g0230351
	38	701	gene-Lalb_Chr08g0234091
	39	353	gene-Lalb_Chr08g0244741
	40	701	gene-Lalb_Chr09g0319561
	41	600	gene-Lalb_Chr09g0325191
	42	701	gene-Lalb_Chr10g0107301
	43	701	gene-Lalb_Chr11g0065221
	44	701	gene-Lalb_Chr11g0072671
	45	701	gene-Lalb_Chr12g0196441
	46	701	gene-Lalb_Chr12g0199491
	47	701	gene-Lalb_Chr12g0201931
	48	701	gene-Lalb_Chr12g0202371
	49	331	gene-Lalb_Chr12g0205621
	50	701	gene-Lalb_Chr13g0291881
	51	701	gene-Lalb_Chr13g0297221
	52	701	gene-Lalb_Chr13g0301351
	53	701	gene-Lalb_Chr13g0301811
	54	701	gene-Lalb_Chr13g0302971
	55	701	gene-Lalb_Chr13g0303091
	56	701	gene-Lalb_Chr14g0369321
	57	701	gene-Lalb_Chr14g0373971
	58	701	gene-Lalb_Chr15g0084041
	59	701	gene-Lalb_Chr15g0084761
	60	701	gene-Lalb_Chr15g0088971
	61	701	gene-Lalb_Chr17g0337651
	62	701	gene-Lalb_Chr17g0346901
	63	701	gene-Lalb_Chr17g0347481
	64	701	gene-Lalb_Chr17g0347641
	65	701	gene-Lalb_Chr17g0349311
	66	701	gene-Lalb_Chr18g0048151
	67	701	gene-Lalb_Chr18g0058161
	68	203	gene-Lalb_Chr18g0061041
	69	701	gene-Lalb_Chr19g0128211
	70	684	gene-Lalb_Chr19g0131941
	71	701	gene-Lalb_Chr19g0137261
	72	701	gene-Lalb_Chr20g0121371
	73	701	gene-Lalb_Chr21g0305031
	74	701	gene-Lalb_Chr21g0305331
	75	202	gene-Lalb_Chr21g0307691
	76	701	gene-Lalb_Chr21g0308191
	77	701	gene-Lalb_Chr21g0308331
	78	701	gene-Lalb_Chr21g0315101
	79	701	gene-Lalb_Chr22g0361641
	80	701	gene-Lalb_Chr23g0265531
	81	701	gene-Lalb_Chr23g0266471
	82	701	gene-Lalb_Chr23g0267141
	83	566	gene-Lalb_Chr23g0273391
	84	701	gene-Lalb_Chr24g0395711
	85	701	gene-Lalb_Chr24g0398961
	86	701	gene-Lalb_Chr25g0280091
	87	701	gene-Lalb_Chr25g0280691
	88	701	gene-Lalb_Chr25g0289111
 Oligonucleotide statistics:
	Total occurrences    	39551
 Position interval parameters:
	Position interval    	20
	Number of windows    	36
	Total positions      	57662
	Degrees of freedom   	35
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-28	[-559,-540]	-549.5	76	827
	2	-27	[-539,-520]	-529.5	76	1520
	3	-26	[-519,-500]	-509.5	77	1526
	4	-25	[-499,-480]	-489.5	80	1577
	5	-24	[-479,-460]	-469.5	80	1600
	6	-23	[-459,-440]	-449.5	80	1600
	7	-22	[-439,-420]	-429.5	80	1600
	8	-21	[-419,-400]	-409.5	81	1617
	9	-20	[-399,-380]	-389.5	81	1620
	10	-19	[-379,-360]	-369.5	83	1643
	11	-18	[-359,-340]	-349.5	83	1660
	12	-17	[-339,-320]	-329.5	83	1660
	13	-16	[-319,-300]	-309.5	88	1670
	14	-15	[-299,-280]	-289.5	88	1760
	15	-14	[-279,-260]	-269.5	88	1760
	16	-13	[-259,-240]	-249.5	88	1760
	17	-12	[-239,-220]	-229.5	88	1760
	18	-11	[-219,-200]	-209.5	88	1760
	19	-10	[-199,-180]	-189.5	88	1760
	20	-9	[-179,-160]	-169.5	88	1760
	21	-8	[-159,-140]	-149.5	88	1760
	22	-7	[-139,-120]	-129.5	88	1760
	23	-6	[-119,-100]	-109.5	88	1757
	24	-5	[-99,-80]	-89.5	83	1660
	25	-4	[-79,-60]	-69.5	83	1660
	26	-3	[-59,-40]	-49.5	83	1660
	27	-2	[-39,-20]	-29.5	83	1639
	28	-1	[-19,0]	-9.5	81	1620
	29	0	[1,20]	10.5	81	1615
	30	1	[21,40]	30.5	80	1600
	31	2	[41,60]	50.5	80	1600
	32	3	[61,80]	70.5	80	1600
	33	4	[81,100]	90.5	80	1571
	34	5	[101,120]	110.5	77	1524
	35	6	[121,140]	130.5	76	1520
	36	7	[141,160]	150.5	76	676

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-549.5         	occurrences in window	1	[-559,-540]
	11	-529.5         	occurrences in window	2	[-539,-520]
	12	-509.5         	occurrences in window	3	[-519,-500]
	13	-489.5         	occurrences in window	4	[-499,-480]
	14	-469.5         	occurrences in window	5	[-479,-460]
	15	-449.5         	occurrences in window	6	[-459,-440]
	16	-429.5         	occurrences in window	7	[-439,-420]
	17	-409.5         	occurrences in window	8	[-419,-400]
	18	-389.5         	occurrences in window	9	[-399,-380]
	19	-369.5         	occurrences in window	10	[-379,-360]
	20	-349.5         	occurrences in window	11	[-359,-340]
	21	-329.5         	occurrences in window	12	[-339,-320]
	22	-309.5         	occurrences in window	13	[-319,-300]
	23	-289.5         	occurrences in window	14	[-299,-280]
	24	-269.5         	occurrences in window	15	[-279,-260]
	25	-249.5         	occurrences in window	16	[-259,-240]
	26	-229.5         	occurrences in window	17	[-239,-220]
	27	-209.5         	occurrences in window	18	[-219,-200]
	28	-189.5         	occurrences in window	19	[-199,-180]
	29	-169.5         	occurrences in window	20	[-179,-160]
	30	-149.5         	occurrences in window	21	[-159,-140]
	31	-129.5         	occurrences in window	22	[-139,-120]
	32	-109.5         	occurrences in window	23	[-119,-100]
	33	-89.5          	occurrences in window	24	[-99,-80]
	34	-69.5          	occurrences in window	25	[-79,-60]
	35	-49.5          	occurrences in window	26	[-59,-40]
	36	-29.5          	occurrences in window	27	[-39,-20]
	37	-9.5           	occurrences in window	28	[-19,0]
	38	10.5           	occurrences in window	29	[1,20]
	39	30.5           	occurrences in window	30	[21,40]
	40	50.5           	occurrences in window	31	[41,60]
	41	70.5           	occurrences in window	32	[61,80]
	42	90.5           	occurrences in window	33	[81,100]
	43	110.5          	occurrences in window	34	[101,120]
	44	130.5          	occurrences in window	35	[121,140]
	45	150.5          	occurrences in window	36	[141,160]
seq id occ chi2 df Pval Eval sig rank -549.5 -529.5 -509.5 -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5
ct ct 2350 184.6 35 3.1e-22 4.9e-21 20.31 1 23 46 44 54 40 50 62 52 49 53 53 56 44 63 72 58 72 71 54 60 58 57 82 64 73 86 86 111 102 94 92 90 74 81 88 36
tc tc 2418 171.9 35 5.5e-20 8.8e-19 18.06 2 24 39 45 63 53 49 66 51 42 68 52 47 47 66 73 64 74 66 60 73 57 71 68 71 75 85 97 90 87 106 85 95 89 91 86 43
cc cc 1585 144.2 35 3.4e-15 5.4e-14 13.27 3 21 26 21 37 43 54 40 25 31 49 39 32 33 34 42 42 59 51 37 33 27 45 56 53 50 63 53 36 69 65 55 46 63 69 61 25
aa aa 4565 110.5 35 9.5e-10 1.5e-08 7.82 4 78 103 125 100 109 105 113 149 129 115 116 136 110 111 118 129 105 156 167 129 141 151 112 120 132 135 172 141 137 168 137 127 153 119 145 72
ca ca 2891 104.5 35 7.7e-09 1.2e-07 6.91 5 39 51 61 74 79 73 67 70 63 81 67 58 68 89 72 84 87 73 96 81 97 98 64 84 88 106 99 91 89 102 95 87 108 96 105 49
tt tt 4330 90.0 35 9.9e-07 1.6e-05 4.80 6 58 106 107 111 126 112 120 103 120 96 110 120 86 100 135 123 128 125 118 119 145 137 134 107 127 150 121 136 151 138 130 145 123 148 146 69
ac ac 2278 80.4 35 2.0e-05 0.00031 3.50 7 27 43 47 48 48 57 49 58 59 60 49 56 56 66 59 70 64 68 78 51 72 75 67 74 64 82 73 86 80 69 82 77 74 70 83 37
gg gg 1198 80.1 35 2.2e-05 0.00035 3.45 8 12 37 29 23 37 29 37 44 27 25 24 30 36 48 39 22 25 30 52 35 51 47 35 32 19 33 24 28 29 31 45 39 34 40 47 23
tg tg 2498 77.6 35 4.6e-05 0.00074 3.13 9 35 55 67 61 74 57 59 68 65 51 85 65 67 72 64 65 65 61 81 62 97 92 75 51 65 76 77 66 103 76 88 75 81 76 81 40
ag ag 2078 76.8 35 5.8e-05 0.00093 3.03 10 21 54 53 49 49 55 41 59 46 61 39 67 67 61 60 65 56 56 72 61 60 55 59 64 51 65 52 67 72 65 59 54 73 60 82 48
ga ga 2039 72.7 35 1.9e-04 0.003 2.52 11 30 50 53 43 48 41 40 54 47 59 52 67 54 66 61 60 59 60 63 57 73 79 49 49 46 58 63 47 73 72 72 65 55 56 75 43
at at 4256 58.8 35 7.1e-03 0.11 0.94 12 72 95 125 124 116 112 114 106 109 110 110 94 95 133 114 114 123 109 123 141 136 147 125 126 136 117 154 125 128 136 132 137 116 125 119 58
gt gt 1992 57.2 35 1.0e-02 0.17 0.78 13 18 54 45 57 55 57 54 53 56 41 56 54 69 49 50 62 44 47 68 57 59 59 67 59 47 59 55 60 73 52 55 57 79 70 61 34
cg cg 421 49.3 35 5.5e-02 0.88 0.05 14 3 16 5 10 9 9 9 14 9 9 14 8 14 9 9 15 10 12 13 14 11 17 11 17 8 14 10 10 8 10 20 23 14 14 20 3
ta ta 3686 43.2 35 1.6e-01 2.6 -0.41 15 52 98 106 104 89 109 109 98 97 96 82 100 86 106 105 95 108 98 109 112 108 104 127 126 118 110 117 135 117 106 98 108 106 97 101 49
gc gc 966 39.1 35 2.9e-01 4.7 -0.67 16 12 25 26 26 24 24 17 25 25 19 27 20 23 29 21 27 21 27 28 26 31 28 28 27 32 33 33 27 33 35 36 32 32 33 39 15 
 Host name	rsat
 Job started	2025-05-21.033917
 Job done	2025-05-21.033917
 Seconds	0.39
	user	0.39
	system	0.01
	cuser	0.01
;	csystem	0