; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140140_2025-05-22.140140_quAEhD/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140140_2025-05-22.140140_quAEhD/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140140_2025-05-22.140140_quAEhD/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140140_2025-05-22.140140_quAEhD/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	18	23	53	2	6	3	0	2	47	14	18
c	14	11	1	54	6	1	2	2	2	17	19
g	14	12	3	1	42	51	1	0	5	14	11
t	12	12	1	1	4	3	55	54	4	13	10
//
; Sites	58
>site_0
CAACGGTTGGC
>site_1
CTGCGGTTACC
>site_2
TTACTGTTACA
>site_3
CAAGGGTTAGT
>site_4
AGACGGCTATA
>site_5
AAACGGTAAAC
>site_6
TGACCGTTAAC
>site_7
TGACAGTTAGG
>site_8
AAACTGTTACT
>site_9
CAACAGTTACA
>site_10
CCACGGTCACG
>site_11
GAACGGTTAGC
>site_12
GAGCGGTTAAC
>site_13
CTACGGCTACG
>site_14
CTACGGTTGCA
>site_15
TTACGGTTTTC
>site_16
CGACTGTTACT
>site_17
GCACGATTACG
>site_18
ACACGGTTTGC
>site_19
GAACAGTTAAT
>site_20
AGATGGTTAAA
>site_21
ATACCGTTAGC
>site_22
ACGCGGTTACA
>site_23
AGACGGGTAGC
>site_24
AAACGGTTATT
>site_25
CGACGGTCACA
>site_26
CCACAGTTAAA
>site_27
AGACGGTTTAC
>site_28
GAACCGTTAGC
>site_29
TAACGGTTCTT
>site_30
GAACGGTTCTT
>site_31
GCACGATTACG
>site_32
ATACGTTTAGA
>site_33
GGAAGGTTAAA
>site_34
CGACGGTAATG
>site_35
CGACCGTTAAA
>site_36
TTACGCTTACC
>site_37
TTACGGTTGTA
>site_38
GCACAGTTACA
>site_39
GAACGGTTGTG
>site_40
AACCGGTTAGG
>site_41
TTACGGTTTTC
>site_42
ATACGATTAAG
>site_43
AAAAGGTTATA
>site_44
AAACGGTTAGC
>site_45
ATACGTTTATA
>site_46
CCACCGTTACC
>site_47
TGACGGTTAAG
>site_48
TCACGTTTACA
>site_49
CATCGGTTAGT
>site_50
ACACTGTTAGC
>site_51
GCACGGTTAAT
>site_52
AAACGGTTGAG
>site_53
TAACCGTTACT
>site_54
TAACGGTTATC
>site_55
GAACGGTTAAA
>site_56
GAACAGTTAGA
>site_57
GAACGGTTATC
a	12	10	2	0	30	1	30	27	0	3	5	13	10
c	5	7	16	2	0	1	1	3	2	24	14	6	7
g	10	5	5	28	1	26	0	1	2	2	7	10	8
t	4	9	8	1	0	3	0	0	27	2	5	2	6
//
; Sites	31
>site_0
ACCGAGAATCGAC
>site_1
GGTGGGAATCCCC
>site_2
TACGAGAAGCGAA
>site_3
TGTGATAATCCGT
>site_4
CTGGAGAATCGTT
>site_5
GACGAGACTACGG
>site_6
AACGAGACTCCGC
>site_7
AAAGAGAACCCAA
>site_8
CATGAGAATCACG
>site_9
GCCGAGAATGGAA
>site_10
GTCGAGAATCGGC
>site_11
GAGGAGAATCTGG
>site_12
GCCCAGAATCCGG
>site_13
ATGGAAAATCCGA
>site_14
AACGACAATCTAA
>site_15
AGTGAGAATTCAG
>site_16
ATTGAGAATCCAT
>site_17
AACGATAATCTAA
>site_18
GACGAGAATGAAA
>site_19
ACCGAGAATAAAG
>site_20
TGTGAGAATCGGG
>site_21
CTCGAGAATTGCC
>site_22
ATTCAGAATCCAT
>site_23
CACTAGAATCCCA
>site_24
GGAGAGAATCTAT
>site_25
TCGGAGAAGCCCC
>site_26
GCTGAGCATCCGA
>site_27
GTCGAGAGTCAGC
>site_28
ATCGATAATACTA
>site_29
CTGGAGACTCTAG
>site_30
ACCGAGAACCACT
a	14	7	55	3	7	2	2	2	48	14	15
c	10	11	2	2	49	0	2	2	1	17	15
g	11	25	2	54	1	2	1	1	6	12	15
t	26	18	2	2	4	57	56	56	6	18	16
//
; Sites	61
>site_0
TGAGCTTTACC
>site_1
TTACCTTTACC
>site_2
GGAGCTTTGAG
>site_3
ATAGATTTAAC
>site_4
TAAGCATTATA
>site_5
ATAGCTTTGCC
>site_6
TTAGCTTTACT
>site_7
TTAGCTTTACG
>site_8
GGAGCTTTAAC
>site_9
CAGGCTTTACC
>site_10
TGATCTTTAGT
>site_11
TGAGATTTACG
>site_12
AGAGATTTACT
>site_13
ACAGTTTTAGG
>site_14
ACACCTTTATC
>site_15
GCAACTTTACC
>site_16
GGAGCTTCATT
>site_17
TGAGCTATAAG
>site_18
TTAGCTTTTAG
>site_19
TGAGCTCTACT
>site_20
GTAACTTTACA
>site_21
TCAGCTGTATG
>site_22
CGAGCTTTTAT
>site_23
CCAGCTCTATG
>site_24
TGAGCTTTAAA
>site_25
TTAGCTTTAAA
>site_26
TCAGTTTTATA
>site_27
AAAGCTTTATT
>site_28
TTAGGTTTAGT
>site_29
CTGGCTTTAAT
>site_30
TGAGCTTTGCC
>site_31
ATAGCTTTCAG
>site_32
AAAGCTATAAC
>site_33
GTAGCTTCACA
>site_34
GCAGATTTAGA
>site_35
AGAGCTTTTTA
>site_36
CCAGCTTTTGG
>site_37
CGAGCTTTAGC
>site_38
GGAGCTTTGTG
>site_39
AATGCTTTACC
>site_40
GGAGCTTTAGT
>site_41
AGAGCTTGATG
>site_42
TTAGCTTAAAT
>site_43
CTAGCTTTTTG
>site_44
AGAGCTTTGAT
>site_45
GCAGCGTTACC
>site_46
GTCGCTTTATA
>site_47
TGAGCTTTGAT
>site_48
TAAGATTTAGT
>site_49
TTAGCGTTATT
>site_50
CCAGCTTAACA
>site_51
CGAGCATTAGC
>site_52
CGAGATTTATC
>site_53
ACCGCTTTACG
>site_54
TGAGTTTTATA
>site_55
AGAGCTTTTGA
>site_56
TAAGATTTAGA
>site_57
TTAGTTTTATA
>site_58
TGTGCTTTATT
>site_59
TTAACTTTATA
>site_60
TGATCTTTAGG
a	16	9	4	51	3	1	52	5	54	18	14
c	15	12	48	1	4	10	2	45	0	11	14
g	11	25	1	0	47	41	0	1	0	13	10
t	13	9	2	3	1	3	1	4	1	13	17
//
; Sites	55
>site_0
CCTAGGACAAC
>site_1
TGAAGGACAAC
>site_2
CGAAGGACACA
>site_3
AGCAGGCCAAC
>site_4
AGCAGCACACG
>site_5
TGCAGGACACT
>site_6
AGCACGACAAC
>site_7
AGCAGCACATC
>site_8
TACAGGATATT
>site_9
AGCAGGAAAGT
>site_10
TTGAGGACAAT
>site_11
TCCACGACAAG
>site_12
ACCAGGAGAGT
>site_13
AGCAGCACACA
>site_14
GTCAGCACATT
>site_15
GCCAAGACAGT
>site_16
ACCAGGACAGG
>site_17
AGCAGGACACG
>site_18
CCCAGGACTTC
>site_19
CGCAGGCCAGT
>site_20
GGCAGCACATT
>site_21
CGCCGGACACT
>site_22
TGCTGGACAAA
>site_23
CTTAGGACAAA
>site_24
CGCTGGACAAC
>site_25
CACAGTACATC
>site_26
GTCAGGAAATT
>site_27
CACACGACAAG
>site_28
ACCAGGACAGT
>site_29
AGCAGGACAGA
>site_30
TTCAGGAAATA
>site_31
TGCAGTACATA
>site_32
GTCAAGACATT
>site_33
GGCTGGACAGT
>site_34
CTCAGGAAAAC
>site_35
GACAAGACAAG
>site_36
TGCAGCACATC
>site_37
GGCAGGTCAAC
>site_38
ACCAGGACACA
>site_39
GGCAGGATATA
>site_40
CGAAGGACAAT
>site_41
AACAGCACAGT
>site_42
TACAGGAAACC
>site_43
TTCATGACATC
>site_44
GACAGGATAGC
>site_45
CACAGCACACA
>site_46
GCCAGTACACG
>site_47
CTCAGGATAGA
>site_48
CGCAGGACAAG
>site_49
TACAGAACAAG
>site_50
ACCACGACAAA
>site_51
CCAAGGACAAT
>site_52
AGCAGCACACA
>site_53
TGCAGCACAGG
>site_54
ACCAGGACAGA
a	9	6	4	17	0	1	2	2	20	20	3	21	5	6
c	6	4	15	1	3	3	0	1	1	0	18	0	8	5
g	2	7	1	1	1	16	18	18	1	0	0	0	2	3
t	5	5	2	3	18	2	2	1	0	2	1	1	7	8
//
; Sites	22
>site_0
AGCATGGTCACACC
>site_1
GGCATGGGAACTTT
>site_2
AGAATGGAAACATT
>site_3
AGCATGGCAATATA
>site_4
CTCACGGGAACACT
>site_5
GAAAGGGGAACACG
>site_6
CGCATGGAAACACA
>site_7
CCCATGGGATCATT
>site_8
CACTTGTGAACACT
>site_9
AACATAAGAACATG
>site_10
TTTTTGGGAACATG
>site_11
TGGCTGGGAACAAA
>site_12
ACCATGAGAACAGC
>site_13
CACACCGGAACAAA
>site_14
TTTATGGGAAAATT
>site_15
TTCATTTGAACACC
>site_16
ACCACTGGAACACT
>site_17
AACATGGGGAAAAC
>site_18
CCCGTCGGAACACA
>site_19
AAATTGGGAACAAC
>site_20
AGAATCGGAACAGA
>site_21
TTCATGGGATAAAT
; Host name	rsat
; Job started	2025-05-22.140202
; Job done	2025-05-22.140202
; Seconds	0.13
;	user	0.13
;	system	0.01
;	cuser	0
;	csystem	0
