; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140202_2025-05-22.140202_bQqV1Q/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140202_2025-05-22.140202_bQqV1Q/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140202_2025-05-22.140202_bQqV1Q/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/22/peak-motifs.2025-05-22.140202_2025-05-22.140202_bQqV1Q/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	21	16	11	0	0	2	3	2	85	50	22	29
c	18	23	16	1	1	2	81	84	1	11	28	21
g	19	27	10	0	85	82	2	2	2	16	21	18
t	30	22	51	87	2	2	2	0	0	11	17	20
//
; Sites	88
>site_0
GGTTGGCCGATC
>site_1
GATCGGCCAACC
>site_2
CCTTGGCCACGA
>site_3
TCGTGGCCAAGG
>site_4
CGATGGCCATGT
>site_5
ACATGGCCATCG
>site_6
GGCTGGCCACGA
>site_7
TCGTGGCCAGCC
>site_8
TTTTGGCCAAAA
>site_9
TTTTGGCCAAAA
>site_10
TGTTTGCCAATA
>site_11
TATTGGCAAACA
>site_12
ACTTGGCCAGGG
>site_13
CCCTGGCCAAGT
>site_14
GTCTGGCCAGAT
>site_15
ATCTGGCCAGAC
>site_16
GCCTGGCCAACT
>site_17
AGTTGGCCAGGC
>site_18
CGCTGGCCATTC
>site_19
GAATGGCCAGCG
>site_20
GTTTGTCCAAGC
>site_21
GCTTGGACAAAC
>site_22
ATGTGGCCAAAT
>site_23
ATTTGGCCACAT
>site_24
ATTTGGCGAATT
>site_25
CACTGGCCACAC
>site_26
GTGTGGCCAGTG
>site_27
GCTTGGCCAACT
>site_28
AGTTGGCCAAGC
>site_29
GAATGGCCAAGG
>site_30
CCTTGGCCATTC
>site_31
TGGTGGCCAAGG
>site_32
CCTTGGCCACCA
>site_33
GTTTGGGCAACC
>site_34
GGTTGCCCAAAC
>site_35
ATATGGCCGACC
>site_36
CCTTGGCCATCG
>site_37
CGATGGCCAAGG
>site_38
GGCTGGCCACAA
>site_39
TTGTGGCCAGCC
>site_40
CATTGTCCAAAT
>site_41
ATTTGGACAATG
>site_42
CGTTGGCCAACG
>site_43
CGTTGGCCAACG
>site_44
TGTTGGCCAGTT
>site_45
AACTGGCCAACA
>site_46
TCTTGGCCAACA
>site_47
TGTTGGCCAAGA
>site_48
ACTTGGCCAGAA
>site_49
TTCTGGCCAAGT
>site_50
AGCTGGCCAATA
>site_51
TATTGGCCAGCT
>site_52
TGTTGGCCATGT
>site_53
ACATGGCCAACA
>site_54
TTCTGGCCAAGC
>site_55
GCTTGGCCAGAA
>site_56
TGATGGCCAGCG
>site_57
CGCTGGCCATCA
>site_58
TTTTGGTCAACG
>site_59
CGTTGACCAAAA
>site_60
ACGTGGCCATCG
>site_61
CGATGGCCACGT
>site_62
TTGTGGCCACGC
>site_63
GCGTGGCCACAA
>site_64
ACTTGGCCCCAC
>site_65
TTTTGGCCACCG
>site_66
CGGTGGCCAAAA
>site_67
AATTGGCAAATT
>site_68
AATTTGCCAATT
>site_69
TCTTGGTCAACA
>site_70
TGTTGACCAAGA
>site_71
AGTTGGCCAGTA
>site_72
TACTGGCCAACT
>site_73
TTTTGGCCAGTG
>site_74
CACTGGCCAAAA
>site_75
GCTTGGCCAAAA
>site_76
TTTTGGCCAAGC
>site_77
GCTTGCCCAAAA
>site_78
TTTTGGGCAAGC
>site_79
TCTTGGACATAT
>site_80
CGTTGGCCATTA
>site_81
TAATGGCCAACG
>site_82
TATTCGCCAATT
>site_83
AATTGGCGAATA
>site_84
TGTTGGCCAAAA
>site_85
TTTTGGCCAACA
>site_86
AGATGGCCAGTC
>site_87
GACTGGCCATCT
a	17	10	13	55	54	55	1	1	0	26	17
c	10	16	6	0	1	4	4	55	1	11	16
g	17	18	4	2	2	0	50	1	55	11	11
t	15	15	36	2	2	0	4	2	3	11	15
//
; Sites	59
>site_0
GGTAAAGCTCA
>site_1
AATAAATCGAC
>site_2
GGAAAAGCGTA
>site_3
AGTAAAGCTAA
>site_4
ACTAACGCGTT
>site_5
GATAAAGCGCG
>site_6
ATAAAAGCGAA
>site_7
GGTAAAGCCTG
>site_8
GATAACGCGAC
>site_9
CCCAAAGCGCA
>site_10
TGTAAACCGAA
>site_11
AATAAAGTGGG
>site_12
ATTATAGCGAC
>site_13
TGTAGAGCGAT
>site_14
CGTAAAGCGCT
>site_15
ATTAAAGCGCG
>site_16
GGAAAAGCGGA
>site_17
TCTAAAGAGAA
>site_18
TGTTAAGCGAC
>site_19
CTCAAAGCGTA
>site_20
TATAACGCGTC
>site_21
TCTAAAACGGA
>site_22
TTTAGAGCGCT
>site_23
GGAAAAGCGAC
>site_24
TTAAAAGCGGA
>site_25
GTTACAGCGAT
>site_26
ATTAAAGGGAA
>site_27
ACTAAATCGAT
>site_28
CGTAAACCGAG
>site_29
AGTAAACCGTC
>site_30
ATTAAAGCGCG
>site_31
CGAAAAGCGGA
>site_32
GTGAAAGCGGC
>site_33
GCCAAAGCGTA
>site_34
GATAAATCGAA
>site_35
ATAAAAGCGAC
>site_36
GGAAAAGCGTC
>site_37
ATTAAACCGAG
>site_38
TGAAAAGCGGG
>site_39
CTCAAAGCGTG
>site_40
GCTAAAGTGCC
>site_41
TCGAAAGCGAC
>site_42
ACCAAAGCGCT
>site_43
TATAACGCGTT
>site_44
ACAAAAGCGGA
>site_45
CGGAAAGCGAC
>site_46
TCTGAAGCGAT
>site_47
GTCAAAGCGGA
>site_48
ACTAAAGCTCC
>site_49
GCTGAAGCGAG
>site_50
GAAAAAGCGAC
>site_51
ACTAAATCGTT
>site_52
TATAAAGCGAC
>site_53
CTAAAAGCGGT
>site_54
TATTAAGCGCT
>site_55
CGTAAAGCGGT
>site_56
CCGAAAGCGAT
>site_57
GCTATAGCGAT
>site_58
TGAAAAGCGAG
a	33	24	2	1	4	8	80	79	9	27	22
c	9	20	3	3	4	9	3	2	67	16	30
g	23	15	3	74	73	66	2	0	3	22	17
t	20	26	77	7	4	2	0	4	6	20	16
//
; Sites	85
>site_0
GATTGGAACGC
>site_1
GGTGGGAATCC
>site_2
AGTGGGACCGC
>site_3
TTTGGAAACTC
>site_4
GGTCGGAACCT
>site_5
ATGGGGAACAG
>site_6
TGTGAGAACTA
>site_7
CATGGGAACTT
>site_8
TTTGGGAACGC
>site_9
GCTGGGAAGGA
>site_10
ACTGGCAACTC
>site_11
TATGGGAATTA
>site_12
AGTGGAAACGA
>site_13
ACTGGAAACAG
>site_14
AATGGAAACAT
>site_15
TCTGGGAAGAA
>site_16
AATGGGAATGG
>site_17
ATTGGGAATTG
>site_18
TTTGGGAAAGT
>site_19
ATTGGAAACAG
>site_20
GCTGGCAACCC
>site_21
ACTGGCAACCT
>site_22
ACTGGGACCCA
>site_23
ACCGGGAACAC
>site_24
GTTTGGAACGA
>site_25
GTTGGCAACTT
>site_26
TGTGGGGACGC
>site_27
GTTGGGATCAG
>site_28
CACGGGAACAC
>site_29
GTTGGGCACAA
>site_30
TTTGGTAACAC
>site_31
AAGGGGAACAC
>site_32
TGTGGGAACTC
>site_33
CATGGAAACAC
>site_34
CATGGGATCAT
>site_35
AAAGGGAACCC
>site_36
ATTGTGAACTG
>site_37
CTTGTGAACAC
>site_38
TTTGGGAACAT
>site_39
GCTGGGAACAA
>site_40
GATGGGATCGC
>site_41
ACCGGGAACGA
>site_42
AGTGGGAAAGA
>site_43
CATGAGAACAG
>site_44
AATGGAAACGA
>site_45
TATGGGAAAAT
>site_46
CTTGGCAACCC
>site_47
TTTGGGCACAA
>site_48
GATTGGAACTC
>site_49
GCGGGGAACTT
>site_50
GTTGCGAACCC
>site_51
AGTGTGAACCA
>site_52
TCTGGGAAGGC
>site_53
TATGCGAACTT
>site_54
AATTGGAACTG
>site_55
GTTTGGAACGG
>site_56
AATGGGATCCA
>site_57
GATGCGAACGG
>site_58
ATTGGGAATGC
>site_59
TGTGGGAATGC
>site_60
GCTGGGAAACT
>site_61
AATGGAAACCC
>site_62
TATGAGAACTG
>site_63
CGTCGGAACAC
>site_64
CTTGGGGACTT
>site_65
ACTGGGAAAAT
>site_66
AGTGGGAAAGG
>site_67
GCTGGCAACTC
>site_68
ATTGGGAACAA
>site_69
GCTGGCAACTA
>site_70
ATTGGGCACTT
>site_71
ACTGGCAACGA
>site_72
ACTGGGAAAAC
>site_73
GTTTGGAACCA
>site_74
GCTGGGAAAAC
>site_75
AATCGGAACAG
>site_76
TTTGTGAACCA
>site_77
TCTGGCAACCC
>site_78
TTTAGGAACTA
>site_79
GTTGGTAACAC
>site_80
TGAGGGAACAG
>site_81
AGTTGGAACGG
>site_82
AGTGAGAACGT
>site_83
AATGCGAACTG
>site_84
GATGGGAAACA
a	23	15	4	3	63	68	69	66	56	8	22	23
c	12	18	3	3	3	1	0	3	8	5	12	12
g	21	20	59	64	4	0	1	0	4	2	10	17
t	15	18	5	1	1	2	1	2	3	56	27	19
//
; Sites	71
>site_0
CGGGAAAAATCG
>site_1
GTTGAAAAATTG
>site_2
CGAGAAAAATGT
>site_3
TTGGAAAAATAA
>site_4
AGGAAAAAATGA
>site_5
AAGGAAAAAATG
>site_6
TTGGAAATATCT
>site_7
ATGGAAACATTT
>site_8
TCGGCAAAATAC
>site_9
GTCGAAAAATTA
>site_10
AATGAAAAATTA
>site_11
ACGCAAAAATAC
>site_12
TTGTAAAAATTG
>site_13
AGGGAAAAAATC
>site_14
GGGAAAAAATCT
>site_15
ATGGAAAACTTG
>site_16
GGGGAAAAGTAT
>site_17
GCTGAAAAATTA
>site_18
AAGGAAAAACGG
>site_19
AGGGAAAAACAG
>site_20
CCGCAAAAATGG
>site_21
GGGGAAAAATTG
>site_22
AAAGAAAAATAA
>site_23
ATGGAAAAGTCA
>site_24
GCGGAAAAGTTA
>site_25
TCGGAAAACTTC
>site_26
GCGGAAAAAAAG
>site_27
GAGGAAAACTAA
>site_28
CAGGAAATATTT
>site_29
GCGGAAAAAAGT
>site_30
GGGGAAACATTC
>site_31
GAAGAAAAATTA
>site_32
TCGGGAAAATTT
>site_33
CGGGAAAATTTT
>site_34
TTTGAAAAATTT
>site_35
ATGGAAAACTGG
>site_36
ATGGGAAAATTC
>site_37
TGGGAAAATTCT
>site_38
AAGGAAAAACAA
>site_39
GAGGAAGAATAA
>site_40
CAGGAAAAAAAT
>site_41
ATGGAAAACTGC
>site_42
TAGGAAAAATGG
>site_43
GCGGAAAACTGA
>site_44
GAGGAAAAACAC
>site_45
ACGGAAACATTA
>site_46
TCGGTAAAATTC
>site_47
CCGGCAAAATGT
>site_48
GCGGGAAAATCG
>site_49
CTGGGAAAATCG
>site_50
GTGGATAAATAA
>site_51
AATGAAAAATCT
>site_52
TGGGAAAAAGCG
>site_53
AAGGAAAAACAA
>site_54
TTGCAAAAATAC
>site_55
TGGGAAAACTAA
>site_56
AGCGAAAAATAT
>site_57
AGGAAAAAATAA
>site_58
GAGGAAAAAATA
>site_59
CGGGAAAACTCC
>site_60
CTGGAAAAAAAA
>site_61
GTGGCAAAATCA
>site_62
TGGGATAAATCT
>site_63
ACGGAAAAAGTG
>site_64
CCCGAAAAATAT
>site_65
AGGGAATAATTA
>site_66
TGGGACAAATTC
>site_67
GCGGAAAAGTTG
>site_68
ACAGAAAAATAT
>site_69
CGGGAAAAAAAA
>site_70
GTGGAAAATTTT
a	17	9	3	48	0	48	44	2	1	11	17
c	10	11	8	0	1	0	4	3	40	12	8
g	8	11	33	1	46	1	1	2	5	14	15
t	14	18	5	0	2	0	0	42	3	12	9
//
; Sites	49
>site_0
CCGAGAATCGA
>site_1
GTGGGAATCCC
>site_2
CGCAGAATCGC
>site_3
CTGAGAATTAA
>site_4
CGCAGAATCAT
>site_5
ATAAGAATCGG
>site_6
TTGAGACTCCA
>site_7
ATGAGAATTTA
>site_8
GAGAGAATGTT
>site_9
TTGAGAAACTA
>site_10
CTGAGAATTAT
>site_11
GTGATAATCCG
>site_12
TGGAGAATCGT
>site_13
AAGAGAATGGG
>site_14
ACGAGACTCCG
>site_15
AAGAGAACCCA
>site_16
ATGAGAATCAC
>site_17
CCGAGAATGGA
>site_18
TCGAGAATCGG
>site_19
TATAGAATCTT
>site_20
AGGAGAATCTG
>site_21
TGCAGAATCAG
>site_22
GCTAGAATCGT
>site_23
CCCAGAATCCG
>site_24
AACAGAATCGA
>site_25
TTGAGGATCGT
>site_26
ACGACAATCTA
>site_27
AGCAGAATCAT
>site_28
ATGAGAAACTG
>site_29
GGGAGACTCAA
>site_30
AAAAGAATCAA
>site_31
TTGAGAATCCA
>site_32
ACGATAATCTA
>site_33
TTGAGAGTCCG
>site_34
TTTAGAATCAG
>site_35
GTGAGAATCGG
>site_36
TTCAGAATCCA
>site_37
ACTAGAATCCC
>site_38
TTGAGAAGCCC
>site_39
TACAGAATCGT
>site_40
GAGAGAATCTA
>site_41
CGGAGAAGCCC
>site_42
ACTAGAACCTC
>site_43
ATGAGAATGAA
>site_44
CAAAGAATCGG
>site_45
AGGAGAATAGG
>site_46
TGGAGACTCTA
>site_47
GGGAGAATGTG
>site_48
CCGAGAACCAC
; Host name	rsat
; Job started	2025-05-22.140218
; Job done	2025-05-22.140219
; Seconds	0.16
;	user	0.16
;	system	0
;	cuser	0
;	csystem	0
