; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	1	0	1	1	0	1	0	1	1	1	0	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	1	0	0	0	1	1	1	0	1	0	1	1	0	0	1	0	1	1
c	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0
g	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
t	0	0	0	0	1	0	0	0	0	0	0	1	1	1	1	0	0	1	0	1	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m1_rc.png
;
a	2	2	0	0	0	2	2	2	2	2	2	0	0	0	0	2	2	2	2	2	2	2	0	0	2	2	2	2	2	2	2	2	2	0	2	0	2	2	0	2	2	2	2	0	0
c	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2
g	0	0	2	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
t	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m2_rc.png
;
a	8	7	6	14	3	21	15	16	19	22	4	8	3	2	8	16	17	5	4	14	16	18	15	3	21	21	9	10
c	3	7	2	3	17	0	7	4	1	1	1	1	0	1	3	7	2	2	1	6	2	3	3	19	1	1	2	4
g	6	4	0	1	0	1	2	1	1	0	4	1	0	1	0	1	1	0	0	1	3	0	3	1	1	0	7	5
t	7	6	16	6	4	2	0	3	3	1	15	14	21	20	13	0	4	17	19	3	3	3	3	1	1	2	6	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m3_rc.png
;
a	5	5	5	8	8	3	8	6	10	11	10	2	2	1	2	2	8	8	1	3	8	9	9	7	2	10	7	5	2
c	1	2	2	0	2	5	0	4	0	0	1	0	1	0	0	2	3	0	2	0	2	0	2	0	7	0	0	0	2
g	4	3	1	0	0	0	1	1	0	0	0	1	1	0	0	1	0	0	0	0	0	2	0	3	1	0	1	2	5
t	1	1	3	3	1	3	2	0	1	0	0	8	7	10	9	6	0	3	8	8	1	0	0	1	1	1	3	4	2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m4_rc.png
;
a	0	1	0	1	1	0	1	0	1	1	1	0	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	1	0	0	0	1	1	1	0	1	0	1	1	0	0	1	0	1	1
c	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0
g	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
t	0	0	0	0	0	1	0	0	0	0	0	0	1	1	1	1	0	0	1	0	1	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m5_rc.png
;
a	3	6	8	7	0	7	9	10	3	1	4	8	9	9	7	1	4	1	0	0	2	4	6	5	0	1	1	5	1	2	3	2
c	2	0	0	1	2	0	0	0	0	2	2	0	0	0	1	5	0	1	1	1	0	0	1	2	0	0	2	3	1	0	1	3
g	3	1	0	1	3	2	0	0	2	1	0	0	1	1	1	0	5	1	0	0	0	2	2	0	0	0	0	2	1	0	0	2
t	2	3	2	1	5	1	1	0	5	6	4	2	0	0	1	4	1	7	9	9	8	4	1	3	10	9	7	0	7	8	6	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.092808_xPypmA_pssm_count_matrices_logo_m6_rc.png
;
; Host name	rsat
; Job started	2025-05-23.092826
; Job done	2025-05-23.092828
; Seconds	0.15
;	user	0.15
;	system	0.06
;	cuser	1.64
;	csystem	0.28