; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 343 364 144 157 895 928 59 148 890 924 887 111 449 375 389
c 141 119 58 117 25 17 8 65 36 21 24 40 106 122 122
g 138 141 83 104 33 11 14 701 52 22 34 49 156 163 158
t 394 392 731 638 63 60 935 102 38 49 71 816 305 356 347
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m1_rc.png
;
a 313 292 95 83 87 72 665 52 57 143 722 107 103 609 678 354 342
c 139 148 54 29 35 60 40 24 40 446 35 29 49 75 34 96 101
g 94 112 34 35 39 37 36 11 34 86 16 27 67 58 39 99 134
t 310 304 673 709 695 687 115 769 725 181 83 693 637 114 105 307 279
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m2_rc.png
;
a 340 322 184 130 139 101 663 130 104 739 83 734 80 739 110 242 543 358 373
c 122 128 51 43 51 61 43 31 43 32 43 23 50 33 26 87 76 91 92
g 111 123 58 36 46 54 55 27 43 24 41 27 44 32 30 84 77 112 112
t 346 346 626 710 683 703 158 731 729 124 752 135 745 115 753 506 223 358 342
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m3_rc.png
;
a 196 194 130 59 48 60 420 87 36 109 461 445 71 424 454 448 337 209 210
c 85 73 61 23 25 41 29 21 13 48 22 15 24 28 23 22 38 65 64
g 57 62 39 16 19 32 23 13 17 279 25 15 35 44 26 17 59 91 87
t 207 216 315 447 453 412 73 424 479 109 37 70 415 49 42 58 111 180 184
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m4_rc.png
;
a 310 325 97 87 768 781 54 92 191 802 781 110 295 329
c 101 98 25 51 22 12 8 33 64 29 21 25 103 111
g 135 131 41 58 49 18 19 628 551 28 24 46 176 131
t 346 338 729 696 53 81 811 139 86 33 66 711 318 321
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m5_rc.png
;
a 230 198 136 129 499 32 25 53 606 39 37 467 526 252 251
c 109 100 65 319 35 8 17 497 10 8 23 72 36 91 109
g 80 80 43 47 23 6 15 35 5 12 22 45 30 74 77
t 236 277 411 160 98 609 598 70 34 596 573 71 63 238 218
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m6_rc.png
;
a 264 300 628 628 176 635 81 625 642 622 299 275
c 85 85 12 7 403 4 31 19 1 17 99 105
g 119 134 10 9 39 3 505 5 9 8 99 95
t 197 146 15 21 47 23 48 16 13 18 168 190
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m7_rc.png
;
a 497 606 493 1377 104 164 1422 1406 1397 114 876 583 610
c 192 218 128 21 8 98 36 20 28 44 131 181 210
g 259 215 152 33 30 1155 42 32 38 38 191 232 233
t 593 502 768 110 1399 124 41 83 78 1345 343 545 488
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m8_rc.png
;
a 301 324 85 92 770 785 61 105 180 806 790 737 344 296
c 129 108 32 55 29 18 4 21 57 32 23 25 103 125
g 134 102 40 60 40 20 21 629 581 30 33 46 118 142
t 338 368 745 695 63 79 816 147 84 34 56 94 337 339
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m9_rc.png
;
a 546 608 1263 177 332 1429 1423 143 1274 1365 1337 1337 581 593
c 218 244 70 59 840 40 28 56 79 60 60 48 194 173
g 220 192 55 71 149 18 40 56 103 47 45 52 237 244
t 593 533 189 1270 256 90 86 1322 121 105 135 140 565 567
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m10_rc.png
;
a 119 117 89 242 65 32 27 52 298 50 20 73 282 266 56 239 274 281 222 147 125
c 39 54 43 31 26 13 21 206 17 8 8 37 18 18 17 30 22 24 26 51 46
g 53 40 31 23 11 10 13 25 4 8 16 171 19 12 25 30 21 9 37 43 61
t 137 137 185 52 246 293 287 65 29 282 304 67 29 52 250 49 31 34 63 107 116
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m11_rc.png
;
a 53 55 138 138 0 0 138 0 54 51
c 16 23 0 0 0 138 0 0 24 17
g 31 26 0 0 0 0 0 138 14 20
t 38 34 0 0 138 0 0 0 46 50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m12_rc.png
;
a 161 159 290 69 259 305 46 303 70 304 61 301 289 69 91 291 295 309 63 259 137 153
c 44 44 20 29 28 12 21 11 16 21 14 17 16 6 35 24 16 12 26 21 63 48
g 46 49 20 17 31 16 15 21 17 15 19 22 13 20 182 21 16 12 32 26 51 51
t 134 133 55 270 67 52 303 50 282 45 291 45 67 290 77 49 58 52 264 79 134 133
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m13_rc.png
;
a 147 167 398 0 398 0 0 398 174 148
c 68 53 0 0 0 0 398 0 37 72
g 49 43 0 0 0 0 0 0 32 41
t 134 135 0 398 0 398 0 0 155 137
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m14_rc.png
;
a 517 535 1294 88 42 89 212 1398 1304 506 501
c 232 296 53 26 41 1093 1148 34 33 202 238
g 181 185 32 27 32 70 32 4 15 202 205
t 539 453 90 1328 1354 217 77 33 117 559 525
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m15_rc.png
;
a 238 250 68 48 51 25 579 18 22 86 589 197 190 258 272
c 110 100 34 12 15 30 17 7 12 422 19 67 76 73 74
g 79 84 25 9 14 15 15 7 11 64 8 173 67 96 98
t 219 212 519 577 566 576 35 614 601 74 30 209 313 219 202
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m16_rc.png
;
a 380 440 86 95 1004 1035 42 130 1019 1075 481 416 410
c 150 128 36 57 34 20 3 44 30 9 109 140 134
g 162 144 47 93 45 9 14 884 47 17 205 191 171
t 439 419 962 886 48 67 1072 73 35 30 336 384 416
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m17_rc.png
;
a 77 84 0 0 205 205 0 205 83 76
c 25 15 0 0 0 0 205 0 31 33
g 36 13 0 205 0 0 0 0 26 25
t 67 93 205 0 0 0 0 0 65 71
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m18_rc.png
;
a 757 903 1818 1833 297 358 1840 1835 1812 787 718
c 251 271 41 10 115 1328 39 36 34 288 280
g 305 382 40 27 1314 133 14 30 30 302 343
t 630 387 44 73 217 124 50 42 67 566 602
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m19_rc.png
;
a 178 183 11 36 40 477 25 25 456 447 190 182
c 65 50 0 48 408 7 5 8 16 14 66 78
g 68 50 6 334 17 2 4 4 18 12 61 75
t 190 218 484 83 36 15 467 464 11 28 184 166
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.114341_iNxX09_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-05-23.114356
; Job done 2025-05-23.114403
; Seconds 0.58
; user 0.58
; system 0.23
; cuser 5.44
; csystem 0.81