; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 129 137 27 18 44 14 17 381 408 392 139 160 146
c 76 68 7 14 310 6 17 17 4 7 62 60 53
g 60 71 8 6 28 10 361 17 6 7 66 83 85
t 167 156 390 394 50 402 37 17 14 26 165 129 148
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m1_rc.png
;
a 175 166 37 38 33 25 83 133 520 497 493 507 246 223
c 85 90 11 29 31 8 308 52 23 15 16 21 74 93
g 93 74 21 16 15 23 52 308 8 31 29 11 90 85
t 223 246 507 493 497 520 133 83 25 33 38 37 166 175
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m2_rc.png
;
a 160 197 517 517 83 28 21 508 530 523 177 184 189
c 91 121 13 7 382 9 39 21 6 10 94 91 91
g 116 136 16 13 25 9 479 18 16 16 97 110 105
t 197 110 18 27 74 518 25 17 12 15 196 179 179
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m3_rc.png
;
a 12 7 4 2 2 2 2 27 26 1 30 3 27 28 13 12
c 4 6 0 0 18 1 5 1 0 24 0 1 1 0 3 5
g 3 9 1 0 3 0 23 1 1 1 0 26 1 1 6 5
t 12 9 26 29 8 28 1 2 4 5 1 1 2 2 9 9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m4_rc.png
;
a 95 116 23 23 19 19 299 303 289 291 112 117
c 49 49 255 5 10 12 8 4 7 5 51 53
g 52 59 13 6 258 276 5 6 8 9 52 66
t 124 96 29 286 33 13 8 7 16 15 105 84
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m5_rc.png
;
a 137 124 157 18 10 14 13 399 48 24 351 164 175
c 81 81 66 9 6 16 382 2 20 16 24 77 69
g 57 77 58 8 5 17 22 2 313 18 21 42 66
t 155 148 149 395 409 383 13 27 49 372 34 147 120
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m6_rc.png
;
a 548 556 201 100 102 1407 1457 1424 1382 539 539
c 268 220 62 28 71 48 31 40 37 231 256
g 251 285 1107 46 1311 53 44 42 48 260 293
t 497 503 194 1390 80 56 32 58 97 534 476
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m7_rc.png
;
a 336 335 41 42 56 55 47 64 886 398 382
c 172 193 22 17 846 8 50 56 38 188 203
g 195 157 14 26 44 12 850 53 53 140 114
t 357 375 983 975 114 985 113 887 83 334 361
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m8_rc.png
;
a 318 289 59 42 32 33 55 952 874 54 287 352
c 167 188 44 37 32 23 825 23 34 36 146 197
g 165 171 27 36 21 36 65 18 23 33 209 152
t 374 376 894 909 939 932 79 31 93 901 382 323
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m9_rc.png
;
a 386 474 1070 83 77 1069 133 1093 1111 417 431
c 165 237 29 44 936 16 72 36 22 203 199
g 248 192 26 50 89 27 924 31 24 203 179
t 390 286 64 1012 87 77 60 29 32 366 380
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m10_rc.png
;
a 103 108 269 270 46 16 13 34 290 45 24 26 70 110
c 55 69 14 10 213 8 15 260 8 18 18 13 75 54
g 54 75 13 18 18 8 260 15 8 213 10 14 69 55
t 110 70 26 24 45 290 34 13 16 46 270 269 108 103
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m11_rc.png
;
a 7 10 4 3 4 3 4 23 25 23 4 5 1 2 2 3 22 7 21 23 6 13
c 3 7 1 1 14 2 3 2 0 2 17 2 2 1 1 18 1 3 3 0 5 5
g 5 5 0 3 3 1 18 1 1 2 2 17 2 0 2 3 2 14 1 1 7 3
t 13 6 23 21 7 22 3 2 2 1 5 4 23 25 23 4 3 4 3 4 10 7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m12_rc.png
;
a 70 96 174 32 18 11 17 233 229 228 153 77 82
c 38 37 25 14 10 197 4 1 2 3 26 53 55
g 52 39 9 12 13 8 212 0 2 1 22 41 36
t 77 65 29 179 196 21 4 3 4 5 36 66 64
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m13_rc.png
;
a 92 106 205 187 33 8 10 257 252 254 191 101 88
c 51 45 30 18 22 224 13 2 1 4 27 52 50
g 48 54 10 21 17 9 230 2 6 0 18 38 48
t 71 57 17 36 190 21 9 1 3 4 26 71 76
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m14_rc.png
;
a 47 56 15 8 10 4 6 134 137 36 103 23 16 18 42 50
c 24 26 4 2 106 5 9 5 2 81 5 13 11 11 24 27
g 20 18 3 4 11 2 119 6 5 9 15 71 9 10 34 17
t 57 48 126 134 21 137 14 3 4 22 25 41 112 109 48 54
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m15_rc.png
;
a 148 185 456 39 20 28 451 65 441 442 167 148
c 81 89 7 5 16 404 7 23 18 8 77 82
g 81 78 7 10 14 32 6 367 9 10 90 95
t 176 134 16 432 436 22 22 31 18 26 152 161
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m16_rc.png
;
a 134 152 28 21 34 402 98 101 414 422 415 407 173 177
c 76 66 14 16 29 8 247 28 14 15 13 16 73 64
g 83 72 16 10 24 23 24 269 15 17 18 18 67 85
t 178 181 413 424 384 38 102 73 28 17 25 30 158 145
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m17_rc.png
;
a 76 76 74 59 201 15 11 15 22 256 34 240 237 89 98
c 36 40 46 123 22 12 6 12 231 6 24 4 6 51 42
g 47 45 95 23 16 8 5 8 11 4 188 11 5 51 53
t 114 112 58 68 34 238 251 238 9 7 27 18 25 82 80
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m18_rc.png
;
a 29 32 4 4 12 1 6 83 86 80 12 14 13 10 68 35 23
c 19 15 3 3 60 2 7 4 1 6 50 10 3 9 3 15 16
g 12 19 2 3 7 3 79 6 3 3 10 53 8 9 8 16 15
t 37 31 88 87 18 91 5 4 7 8 25 20 73 69 18 31 43
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m19_rc.png
;
a 970 1135 2314 221 271 2395 2445 2383 2296 931 954
c 404 497 62 48 133 86 52 79 80 446 409
g 444 435 94 98 2055 90 89 91 110 449 487
t 846 597 194 2297 205 93 78 111 178 838 814
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115211_xTAsD6_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-05-23.115221
; Job done 2025-05-23.115228
; Seconds 0.44
; user 0.44
; system 0.22
; cuser 5.26
; csystem 0.71