; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 137 130 51 283 297 47 55 312 331 326 40 69 84 314 304 57 254 113 120
c 53 42 32 16 25 11 37 19 8 11 11 24 192 18 18 25 18 60 61
g 41 61 29 32 19 7 239 20 14 17 14 223 46 14 18 23 32 53 44
t 148 146 267 48 38 314 48 28 26 25 314 63 57 33 39 274 75 153 154
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m1_rc.png
;
a 277 299 625 681 681 62 92 700 688 70 304 281 268
c 101 119 30 12 2 28 575 11 16 36 113 115 128
g 132 119 43 14 11 585 29 3 9 26 101 93 89
t 228 201 40 31 44 63 42 24 25 606 220 249 253
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m2_rc.png
;
a 582 631 355 1380 52 61 146 1658 111 139 895 692 585
c 262 226 174 86 31 38 1314 30 27 74 201 262 279
g 205 204 111 73 12 35 78 12 28 72 174 226 225
t 716 704 1125 226 1670 1631 227 65 1599 1480 495 585 676
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m3_rc.png
;
a 172 169 129 310 38 33 48 433 34 37 32 59 391 334 101 307 165 174
c 68 74 69 26 11 24 321 13 21 17 16 327 30 29 36 33 63 76
g 72 57 44 31 10 17 26 3 16 19 15 35 12 23 39 42 76 57
t 162 174 232 107 415 400 79 25 403 401 411 53 41 88 298 92 170 167
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m4_rc.png
;
a 51 53 43 115 34 125 137 143 17 15 139 141 138 42 108 43 26 28 44 51
c 21 19 64 5 7 12 3 3 2 9 4 3 1 51 7 8 18 7 21 17
g 22 29 24 8 90 5 4 2 5 119 5 8 1 20 12 60 13 8 21 20
t 59 52 22 25 22 11 9 5 129 10 5 1 13 40 26 42 96 110 67 65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m5_rc.png
;
a 364 371 847 848 852 99 149 879 861 838 359 353
c 121 164 18 13 4 58 663 16 18 22 137 127
g 142 161 24 14 17 674 46 2 17 18 124 143
t 289 220 27 41 43 85 58 19 20 38 296 293
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m6_rc.png
;
a 73 74 33 34 34 161 169 178 14 25 174 165 166 63 127 49 36 37 48 49
c 31 24 12 10 8 9 5 2 3 11 5 4 7 58 12 17 16 12 34 25
g 21 27 18 98 128 14 3 4 8 145 10 10 4 27 14 71 7 14 34 37
t 66 66 128 49 21 7 14 7 166 10 2 12 14 43 38 54 132 128 75 80
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m7_rc.png
;
a 175 172 165 32 50 419 437 445 31 94 419 446 85 334 192 180
c 70 69 119 11 33 26 15 8 6 27 19 6 23 23 54 75
g 54 76 66 26 348 19 13 12 9 325 19 9 15 50 67 69
t 192 174 141 422 60 27 26 26 445 45 34 30 368 84 178 167
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m8_rc.png
;
a 409 374 233 824 961 128 195 976 977 940 777 325 844 827 600 452 426
c 123 124 89 59 25 19 60 28 29 35 50 401 55 47 102 145 121
g 160 155 91 72 29 39 722 40 25 35 70 108 61 64 119 153 157
t 384 423 663 121 61 890 99 32 45 66 179 242 116 138 255 326 372
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m9_rc.png
;
a 200 160 104 379 441 47 62 423 423 419 337 136 387 133 93 332 176 167
c 48 58 36 22 5 10 28 13 11 12 29 186 16 39 36 35 64 67
g 63 76 38 28 7 16 354 29 17 15 41 46 11 189 33 30 68 67
t 165 182 298 47 23 403 32 11 25 30 69 108 62 115 314 79 168 175
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m10_rc.png
;
a 198 211 478 457 100 42 43 87 487 453 36 431 170 190
c 68 107 15 14 319 5 33 377 17 11 24 20 89 90
g 90 92 9 22 34 8 369 28 3 18 17 20 61 63
t 175 121 29 38 78 476 86 39 24 49 454 60 211 188
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m11_rc.png
;
a 154 152 21 337 330 54 348 40 13 8 79 112
c 40 42 13 6 6 255 3 12 1 6 64 69
g 57 52 6 7 8 21 1 263 5 5 88 39
t 110 115 321 11 17 31 9 46 342 342 130 141
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m12_rc.png
;
a 1026 990 2423 164 438 2561 2561 211 2399 1036 1159
c 395 496 67 62 1803 43 40 95 84 341 384
g 376 352 50 66 206 29 18 87 92 332 325
t 929 888 186 2434 279 93 107 2333 151 1017 858
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m13_rc.png
;
a 189 168 29 373 36 32 405 395 23 387 154 173
c 47 57 5 2 20 327 4 5 12 7 62 54
g 41 79 8 8 313 7 1 3 10 14 49 51
t 141 114 376 35 49 52 8 15 373 10 153 140
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m14_rc.png
;
a 388 339 232 743 816 87 149 828 824 783 712 202 708 189 318 311
c 106 102 84 45 21 12 53 28 28 29 28 440 45 41 121 145
g 131 130 80 44 28 32 634 37 23 43 48 82 40 55 151 134
t 295 349 524 88 55 789 84 27 45 65 132 196 127 635 330 330
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m15_rc.png
;
a 209 200 426 428 126 61 87 33 28 51 473 32 38 340 185 174
c 63 97 30 28 242 13 46 18 15 391 15 19 33 40 75 85
g 100 79 20 28 44 15 250 13 16 28 9 10 16 40 69 74
t 155 151 51 43 115 438 144 463 468 57 30 466 440 107 198 194
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m16_rc.png
;
a 47 40 76 97 87 28 25 98 92 17 18 101 96 92 14 23 23 97 88 80 39 37
c 10 15 11 4 5 3 63 1 4 4 12 5 5 8 3 5 62 6 8 7 11 20
g 22 20 8 6 7 55 12 9 2 7 76 3 3 3 2 61 12 2 3 7 23 13
t 35 39 19 7 15 28 14 6 16 86 8 5 10 11 95 25 17 9 15 20 41 44
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m17_rc.png
;
a 509 506 360 18 16 31 1378 31 184 814 566 496
c 204 206 427 6 14 1321 5 10 103 157 234 213
g 188 156 139 2 12 17 3 8 92 138 166 170
t 516 549 491 1391 1375 48 31 1368 1038 308 451 538
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m18_rc.png
;
a 345 394 923 935 152 54 79 84 902 333 389
c 148 200 18 14 720 4 27 45 19 129 124
g 175 169 9 10 37 8 758 31 18 138 100
t 325 230 43 34 84 927 129 833 54 393 380
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m19_rc.png
;
a 257 292 684 684 0 0 684 315 302
c 109 139 0 0 684 684 0 89 118
g 105 88 0 0 0 0 0 79 77
t 213 165 0 0 0 0 0 201 187
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.115757_ENwKvy_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-05-23.115809
; Job done 2025-05-23.115817
; Seconds 0.52
; user 0.52
; system 0.23
; cuser 5.81
; csystem 0.82