; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/05/23/oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 60 74 46 13 25 20 14 9 15 14 26 24 17 62 80 66
c 232 110 307 399 12 430 362 14 484 132 46 461 93 107 258 164
g 164 258 107 93 461 46 132 484 14 362 430 12 399 307 110 232
t 66 80 62 17 24 26 14 15 9 14 20 25 13 46 74 60
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m1_rc.png
;
a 67 84 53 43 30 11 18 21 10 10 37 12 16 30 25 54 73 50
c 164 171 216 73 109 470 42 119 483 19 345 450 25 353 381 199 194 241
g 241 194 199 381 353 25 450 345 19 483 119 42 470 109 73 216 171 164
t 50 73 54 25 30 16 12 37 10 10 21 18 11 30 43 53 84 67
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m2_rc.png
;
a 38 49 23 26 46 28 19 24 13 4 11 23 8 7 15 13 8 35 12 27 47
c 133 77 192 107 65 169 127 33 193 255 4 196 266 13 78 258 19 87 238 57 107
g 86 126 45 127 115 52 121 210 47 23 260 55 7 258 163 5 255 141 18 158 91
t 29 34 26 26 60 37 19 19 33 4 11 12 5 8 30 10 4 23 18 44 41
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m3_rc.png
;
a 123 170 75 46 50 30 9 37 28 21 392 115 125
c 213 192 335 73 53 791 16 22 796 32 133 374 181
g 439 365 375 718 728 11 828 792 17 800 285 238 475
t 88 136 78 26 32 31 10 12 22 10 53 136 82
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m4_rc.png
;
a 84 41 24 15 9 169 23 13 181 175 14 26 68 68
c 40 62 154 9 178 6 13 179 4 12 10 14 54 53
g 38 50 12 9 12 18 159 12 12 8 166 147 41 47
t 45 54 17 174 8 14 12 3 10 12 17 20 44 39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m5_rc.png
;
a 59 67 0 0 184 184 0 184 83 62
c 47 46 0 184 0 0 0 0 26 34
g 37 23 0 0 0 0 184 0 29 48
t 41 48 184 0 0 0 0 0 46 40
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m6_rc.png
;
a 135 122 29 28 58 11 13 28 488 155 148
c 128 122 453 481 430 10 13 34 22 117 119
g 131 137 30 15 24 17 491 470 18 149 161
t 157 170 39 27 39 513 34 19 23 130 123
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m7_rc.png
;
a 31 32 12 31 12 7 14 15 1 16 13 5 11 7 6 12 54 23 30 34 40 38
c 61 130 47 84 200 32 16 206 54 22 186 139 8 192 155 19 120 72 33 145 77 61
g 108 51 157 104 14 191 200 6 177 188 15 87 211 20 65 202 34 126 156 35 95 115
t 36 23 20 17 10 6 6 9 4 10 22 5 6 17 10 3 28 15 17 22 24 22
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m8_rc.png
;
a 47 69 186 0 186 186 0 0 68 56
c 49 37 0 0 0 0 0 186 52 41
g 65 49 0 186 0 0 186 0 15 44
t 25 31 0 0 0 0 0 0 51 45
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m9_rc.png
;
a 79 119 213 11 17 12 10 24 30 21 77 103 62
c 412 198 285 700 12 707 735 11 665 649 362 317 378
g 170 350 133 32 723 22 11 705 38 63 259 178 206
t 105 99 135 23 14 25 10 26 33 33 68 168 120
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m10_rc.png
;
a 9 8 3 2 2 0 0 2 1 0 34 12 9
c 10 9 35 38 36 1 1 0 2 2 1 9 15
g 15 10 4 0 1 2 40 40 2 39 5 7 10
t 8 15 0 2 3 39 1 0 37 1 2 14 8
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m11_rc.png
;
a 23 38 28 21 29 8 7 15 8 3 17 13 6 9 13 10 7 22 22 23 43 36
c 98 62 148 111 98 210 48 23 224 66 22 200 177 11 201 187 27 103 98 53 109 95
g 95 109 53 98 103 27 187 201 11 177 200 22 66 224 23 48 210 98 111 148 62 98
t 36 43 23 22 22 7 10 13 9 6 13 17 3 8 15 7 8 29 21 28 38 23
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m12_rc.png
;
a 348 278 0 966 966 0 966 369 290
c 189 217 966 0 0 966 0 183 227
g 183 218 0 0 0 0 0 173 196
t 246 253 0 0 0 0 0 241 253
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m13_rc.png
;
a 52 37 13 10 7 124 10 6 125 24 7 13 34 41
c 30 39 118 8 135 7 8 137 8 12 11 9 44 41
g 36 43 12 6 7 15 128 7 10 108 129 122 39 37
t 38 37 13 132 7 10 10 6 13 12 9 12 39 37
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m14_rc.png
;
a 54 57 19 14 8 162 12 13 155 165 17 21 59 55
c 43 48 153 9 10 22 15 154 10 12 6 10 54 42
g 71 59 20 170 183 8 173 34 20 18 175 165 53 69
t 37 41 13 12 4 13 5 4 20 10 7 9 39 39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m15_rc.png
;
a 161 128 568 0 0 0 0 205 152
c 126 168 0 0 0 568 568 113 147
g 118 138 0 0 568 0 0 104 101
t 163 134 0 568 0 0 0 146 168
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m16_rc.png
;
a 37 40 0 0 0 153 0 153 56 34
c 30 34 0 153 153 0 0 0 24 31
g 42 34 0 0 0 0 153 0 28 45
t 44 45 153 0 0 0 0 0 45 43
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m17_rc.png
;
a 310 239 0 973 0 0 973 272 277
c 192 224 973 0 0 973 0 195 274
g 209 203 0 0 0 0 0 191 206
t 262 307 0 0 973 0 0 315 216
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m18_rc.png
;
a 79 80 0 0 230 0 0 230 65 58
c 51 41 0 230 0 0 0 0 44 42
g 42 44 0 0 0 0 230 0 41 51
t 58 65 230 0 0 230 0 0 80 79
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m19_rc.png
;
a 38 39 18 7 13 155 8 12 9 6 7 11 47 28
c 48 53 150 21 17 28 9 169 6 162 163 19 59 84
g 84 59 19 163 162 6 169 9 28 17 21 150 53 48
t 28 47 11 7 6 9 12 8 155 13 7 18 39 38
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/05/23//oligo-analysis_2025-05-23.120821_EugpMk_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-05-23.120831
; Job done 2025-05-23.120837
; Seconds 0.36
; user 0.36
; system 0.18
; cuser 4.99
; csystem 0.67