RSAT - peak-motifs result

Sequence composition (test sequences)
Nb of peaks: 114 Total seq. size: 52 kb Min length: 2 bp Mean length: 454.526 bp Max length: 501 bp		[ seq: converted purged ] [ lengths: list distrib graph ]
Nucleotide composition profiles	Transition frequencies Position profiles	[ 1nt: freq transitions ] [ bg model: Inclusive format ] [ profile: table html(individual) ]
Dinucleotide composition profiles	Transition frequencies Position profiles	[ 2nt: freq transitions ] [ bg model: Inclusive format ] [ profile: table html(individual) ]
Sequence composition (ctrl sequences)
Nb of peaks: 41359 Total seq. size: 18852 kb Min length: 1 bp Mean length: 455.805 bp Max length: 501 bp		[ seq: converted purged ] [ lengths: list distrib graph ]
Nucleotide composition profiles	Transition frequencies Position profiles	[ 1nt: freq transitions ] [ bg model: Inclusive format ] [ profile: table html(individual) ]
Dinucleotide composition profiles	Transition frequencies Position profiles	[ 2nt: freq transitions ] [ bg model: Inclusive format ] [ profile: table html(individual) ]

1. Thomas-Chollier M, Herrmann C, Defrance M, Sand O, Thieffry D, van Helden J. (2012). RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets. Nucleic Acids Res 40(4): e31.
2. Thomas-Chollier M, Darbo E, Herrmann C, Defrance M, Thieffry D, van Helden J. (2012). A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs. Nat Protoc 7(8): 1551-1568.