AC  assembly_1
XX
ID  aaaaagg
XX
DE  nnAAAAAGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         3.23      0.00      0.00      0.00
4         5.85      0.00      0.00      0.00
5         5.85      0.00      0.00      0.00
6         5.85      0.00      0.00      0.00
7         5.85      0.00      0.00      0.00
8         0.00      0.00      5.85      0.00
9         0.00      0.00      5.85      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: aaaaagg
CC  asmb.seed: aaaagg
CC  matrix.nb: 1
CC  sites: 2
CC  consensus.strict: --AAAAAGG--
CC  consensus.strict.rc: --CCTTTTT--
CC  consensus.IUPAC: nnAAAAAGGnn
CC  consensus.IUPAC.rc: NNCCTTTTTNN
CC  consensus.regexp: [acgt][acgt]AAAAAGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCTTTTT[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  caacaaa
XX
DE  nncaacaaann
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.22      0.00      0.00
4         1.23      0.00      0.00      0.00
5         1.23      0.00      0.00      0.00
6         0.00      1.23      0.00      0.00
7         1.23      0.00      0.00      0.00
8         1.23      0.00      0.00      0.00
9         1.23      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: caacaaa
CC  asmb.seed: aacaaa
CC  matrix.nb: 2
CC  sites: 2
CC  consensus.strict: --caacaaa--
CC  consensus.strict.rc: --TTTGTTG--
CC  consensus.IUPAC: nncaacaaann
CC  consensus.IUPAC.rc: NNTTTGTTGNN
CC  consensus.regexp: [acgt][acgt]caacaaa[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TTTGTTG[ACGT][ACGT]
XX
//
