/var/www/html/rsat/public_html/tmp/www-data/2025/05/26/peak-motifs.2025-05-26.211230_2025-05-26.211230_ZHQlvw/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/05/26/peak-motifs.2025-05-26.211230_2025-05-26.211230_ZHQlvw/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title znf492_2 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/05/26/peak-motifs.2025-05-26.211230_2025-05-26.211230_ZHQlvw/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/05/26/peak-motifs.2025-05-26.211230_2025-05-26.211230_ZHQlvw/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/05/26/peak-motifs.2025-05-26.211230_2025-05-26.211230_ZHQlvw/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	705
	Sum of sequence lengths      	157204
	Min sequence length          	0
	Max sequence length          	607
	Average sequence length      	222
	Possible positions           	156499
 Oligonucleotide statistics:
	Total occurrences    	38911
 Position interval parameters:
	Position interval    	20
	Number of windows    	32
	Total positions      	156499
	Degrees of freedom   	31
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-16	[-319,-300]	-309.5	1	4
	2	-15	[-299,-280]	-289.5	1	20
	3	-14	[-279,-260]	-269.5	2	30
	4	-13	[-259,-240]	-249.5	4	52
	5	-12	[-239,-220]	-229.5	11	150
	6	-11	[-219,-200]	-209.5	18	342
	7	-10	[-199,-180]	-189.5	23	422
	8	-9	[-179,-160]	-169.5	59	707
	9	-8	[-159,-140]	-149.5	162	1909
	10	-7	[-139,-120]	-129.5	250	4077
	11	-6	[-119,-100]	-109.5	398	6826
	12	-5	[-99,-80]	-89.5	584	9588
	13	-4	[-79,-60]	-69.5	659	12702
	14	-3	[-59,-40]	-49.5	704	13966
	15	-2	[-39,-20]	-29.5	705	14094
	16	-1	[-19,0]	-9.5	705	14100
	17	0	[1,20]	10.5	705	14100
	18	1	[21,40]	30.5	705	14093
	19	2	[41,60]	50.5	704	13874
	20	3	[61,80]	70.5	657	12587
	21	4	[81,100]	90.5	565	9159
	22	5	[101,120]	110.5	383	6529
	23	6	[121,140]	130.5	248	3922
	24	7	[141,160]	150.5	161	1647
	25	8	[161,180]	170.5	46	635
	26	9	[181,200]	190.5	23	410
	27	10	[201,220]	210.5	17	328
	28	11	[221,240]	230.5	11	129
	29	12	[241,260]	250.5	4	48
	30	13	[261,280]	270.5	2	27
	31	14	[281,300]	290.5	1	20
	32	15	[301,320]	310.5	1	2

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-309.5         	occurrences in window	1	[-319,-300]
	11	-289.5         	occurrences in window	2	[-299,-280]
	12	-269.5         	occurrences in window	3	[-279,-260]
	13	-249.5         	occurrences in window	4	[-259,-240]
	14	-229.5         	occurrences in window	5	[-239,-220]
	15	-209.5         	occurrences in window	6	[-219,-200]
	16	-189.5         	occurrences in window	7	[-199,-180]
	17	-169.5         	occurrences in window	8	[-179,-160]
	18	-149.5         	occurrences in window	9	[-159,-140]
	19	-129.5         	occurrences in window	10	[-139,-120]
	20	-109.5         	occurrences in window	11	[-119,-100]
	21	-89.5          	occurrences in window	12	[-99,-80]
	22	-69.5          	occurrences in window	13	[-79,-60]
	23	-49.5          	occurrences in window	14	[-59,-40]
	24	-29.5          	occurrences in window	15	[-39,-20]
	25	-9.5           	occurrences in window	16	[-19,0]
	26	10.5           	occurrences in window	17	[1,20]
	27	30.5           	occurrences in window	18	[21,40]
	28	50.5           	occurrences in window	19	[41,60]
	29	70.5           	occurrences in window	20	[61,80]
	30	90.5           	occurrences in window	21	[81,100]
	31	110.5          	occurrences in window	22	[101,120]
	32	130.5          	occurrences in window	23	[121,140]
	33	150.5          	occurrences in window	24	[141,160]
	34	170.5          	occurrences in window	25	[161,180]
	35	190.5          	occurrences in window	26	[181,200]
	36	210.5          	occurrences in window	27	[201,220]
	37	230.5          	occurrences in window	28	[221,240]
	38	250.5          	occurrences in window	29	[241,260]
	39	270.5          	occurrences in window	30	[261,280]
	40	290.5          	occurrences in window	31	[281,300]
	41	310.5          	occurrences in window	32	[301,320]
seq id occ chi2 df Pval Eval sig rank -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5
aa aa 4207 175.3 31 4.6e-22 7.4e-21 20.13 1 0 0 3 5 5 22 27 37 61 93 197 295 332 368 395 465 450 325 310 287 216 135 62 51 20 15 20 3 4 4 0 0
tt tt 4100 143.4 31 2.2e-16 3.5e-15 14.45 2 0 2 3 3 3 3 4 21 44 107 142 191 253 347 332 377 493 449 420 348 223 138 95 59 22 10 3 4 3 0 1 0
ca ca 2641 75.3 31 1.5e-05 0.00024 3.63 3 0 0 2 6 5 13 18 17 54 66 130 168 216 241 235 212 202 223 233 197 156 100 59 34 16 10 14 5 4 3 2 0
gg gg 1937 60.0 31 1.3e-03 0.021 1.67 4 0 4 5 4 6 1 7 18 38 55 79 137 151 182 159 134 153 151 153 163 121 90 61 35 12 4 4 6 2 0 2 0
cc cc 1975 53.6 31 7.1e-03 0.11 0.95 5 1 0 0 4 7 9 4 5 42 74 88 110 155 170 191 166 153 156 183 144 127 79 53 27 4 13 3 5 1 1 0 0
at at 2591 47.4 31 3.0e-02 0.48 0.32 6 0 2 4 4 5 6 13 16 35 61 119 179 233 231 214 171 194 238 255 206 161 109 62 35 15 10 5 2 2 1 2 1
ag ag 2901 47.3 31 3.0e-02 0.49 0.31 7 1 4 2 3 6 6 8 20 48 75 130 201 232 236 269 265 256 229 235 206 170 131 70 49 20 5 12 5 4 2 1 0
gc gc 1714 39.8 31 1.3e-01 2.1 -0.33 8 0 1 1 1 3 6 6 19 34 58 79 109 137 146 144 142 145 157 129 133 100 62 43 25 9 9 7 3 3 2 1 0
ga ga 2392 38.6 31 1.6e-01 2.6 -0.42 9 1 4 1 3 8 4 9 15 29 67 99 170 205 203 228 203 183 183 200 181 138 120 70 40 13 3 6 2 2 1 1 0
tg tg 2688 27.7 31 6.4e-01 10 -1.01 10 0 0 1 3 7 4 11 18 36 77 106 174 221 243 238 225 201 251 218 223 155 119 78 40 9 10 4 6 4 3 3 0
tc tc 2314 23.7 31 8.2e-01 13 -1.12 11 0 0 2 2 2 5 11 10 35 47 99 120 192 202 197 219 192 225 227 174 140 95 61 23 7 11 4 5 3 2 2 0
cg cg 418 23.6 31 8.3e-01 13 -1.12 12 1 0 0 0 1 1 2 5 11 19 18 24 38 38 32 35 28 33 32 29 22 24 15 7 2 1 0 0 0 0 0 0
ac ac 1900 21.4 31 9.0e-01 14 -1.16 13 0 0 1 4 4 8 10 12 33 49 98 111 156 181 177 168 156 147 159 144 109 86 42 19 8 3 5 5 2 2 1 0
ct ct 2872 16.7 31 9.8e-01 16 -1.20 14 0 1 1 0 4 6 7 20 33 78 114 163 229 247 257 275 272 273 232 238 178 100 76 30 8 8 5 8 4 3 2 0
gt gt 1901 15.2 31 9.9e-01 16 -1.20 15 0 0 1 2 3 2 6 12 28 46 81 110 154 162 175 179 152 180 159 144 102 91 54 29 9 6 2 5 3 2 2 0
ta ta 2360 13.1 31 1.0e+00 16 -1.20 16 0 2 3 2 1 6 6 14 30 60 113 158 191 207 198 200 205 206 211 191 153 90 51 29 15 6 4 3 3 1 0 1 
 Host name	rsat
 Job started	2025-05-26.211234
 Job done	2025-05-26.211235
 Seconds	0.88
	user	0.88
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;	csystem	0