peak-motifs sertoli

Motif discovery

Motif 1 oligos_6nt_mkv4_m1

k-mer sig=22.28; evalue=5.2e-23

tsTGACCTTGAvm

KBTCAAGGTCASA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tsTGACCTTGAvm

NR5A1 MA1540.3 R 11 0.7857 0.972 0.764 NA NA

ESRRB MA0141.4 R 10 0.7692 0.981 0.755 NA NA

ESRRA MA0592.4 R 9 0.6923 0.994 0.688 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 988 (28.71%)
Max nb of predicted sites per peak: 8
(chr1:51481733-51482106)
Mean nb of predicted sites per peak: 1.19

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv4_m2

k-mer sig=19.20; evalue=6.3e-20

gwwACAATGTtdc

GHAACATTGTWWC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gwwACAATGTtdc

Sox17 MA0078.3 D 10 0.7692 0.778 0.598 NA NA

Dmrt1 MA1603.2 D 9 0.6923 0.861 0.596 NA NA

Sox6 MA0515.1 R 10 0.7692 0.770 0.592 NA NA

Total matches= 19 (16 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1071 (31.12%)
Max nb of predicted sites per peak: 68
(chr1:54820677-54821665)
Mean nb of predicted sites per peak: 2.52

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv4_m3

k-mer sig=12.58; evalue=2.6e-13

vwcACCTCAbm

KVTGAGGTGWB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vwcACCTCAbm

XBP1 MA0844.2 D 11 1.0000 0.722 0.722 NA NA

JUND MA0492.2 R 11 1.0000 0.707 0.707 NA NA

ATF2 MA1632.2 R 10 0.9091 0.759 0.690 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 474 (13.78%)
Max nb of predicted sites per peak: 3
(chr10:23665421-23666240)
Mean nb of predicted sites per peak: 1.09

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv4_m4

k-mer sig=11.11; evalue=7.8e-12

rwGATGTCAyh

DRTGACATCWY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rwGATGTCAyh

JUN MA0488.2 D 10 0.9091 0.837 0.761 NA NA

ATF2 MA1632.2 D 10 0.9091 0.829 0.753 NA NA

FOSB::JUN MA1127.1 R 11 1.0000 0.735 0.735 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 587 (17.06%)
Max nb of predicted sites per peak: 3
(chr4:119958930-119959899)
Mean nb of predicted sites per peak: 1.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv4_m5

k-mer sig=8.57; evalue=2.7e-09

waCAAAAGAATrh

DYATTCTTTTGTW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor waCAAAAGAATrh

SOX18 MA1563.2 D 8 0.6154 0.751 0.462 NA NA

ZNF384 MA1125.2 D 8 0.6154 0.717 0.441 NA NA

SOX15 MA1152.2 R 7 0.5385 0.760 0.409 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 498 (14.47%)
Max nb of predicted sites per peak: 3
(chr6:148296650-148297493)
Mean nb of predicted sites per peak: 1.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt_m1

k-mer sig=35.40; evalue=4e-36

gmaACAtTGTaACAaTGTwdc

GHWACATTGTTACAATGTTKC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gmaACAtTGTaACAaTGTwdc

DMRTA1 MA1707.2 R 10 0.4762 0.912 0.434 NA NA

DMRTC2 MA1479.2 R 11 0.5238 0.776 0.406 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 834 (24.24%)
Max nb of predicted sites per peak: 68
(chr5:118021469-118022025)
Mean nb of predicted sites per peak: 2.79

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 positions_6nt_m2

k-mer sig=19.15; evalue=7.1e-20

cykGCATTCCTkh

DMAGGAATGCMRG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cykGCATTCCTkh

TEAD3 MA0808.1 D 8 0.6154 0.894 0.550 NA NA

TEAD1 MA0090.4 D 9 0.6923 0.772 0.535 NA NA

TEAD4 MA0809.3 D 8 0.6154 0.794 0.489 NA NA

Total matches= 7 (4 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 646 (18.77%)
Max nb of predicted sites per peak: 10
(chr8:12719580-12720171)
Mean nb of predicted sites per peak: 1.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 positions_6nt_m3

k-mer sig=10.10; evalue=7.9e-11

aktTCAAGGTCAsm

KSTGACCTTGAAMT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aktTCAAGGTCAsm

NR5A1 MA1540.3 D 12 0.8571 0.969 0.830 NA NA

ESRRB MA0141.4 D 10 0.7143 0.983 0.702 NA NA

ESRRA MA0592.4 D 9 0.6429 0.994 0.639 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 964 (28.02%)
Max nb of predicted sites per peak: 8
(chr1:51481733-51482106)
Mean nb of predicted sites per peak: 1.21

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 positions_6nt_m4

k-mer sig=35.40; evalue=4e-36

ghwACAtTGTaaCaaagtw

WACTTTGTTACAATGTWDC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ghwACAtTGTaaCaaagtw

DMRTA1 MA1707.2 R 10 0.5263 0.928 0.488 NA NA

DMRTC2 MA1479.2 R 11 0.5789 0.819 0.474 NA NA

Dmrt1 MA1603.2 R 9 0.4737 0.889 0.421 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1132 (32.90%)
Max nb of predicted sites per peak: 71
(chr3:144803858-144804974)
Mean nb of predicted sites per peak: 2.49

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 positions_6nt_m5

k-mer sig=19.15; evalue=7.1e-20

ghaACATTCCTkw

WMAGGAATGTTDC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ghaACATTCCTkw

TEAD1 MA0090.4 D 9 0.6923 0.874 0.605 NA NA

TEAD3 MA0808.1 D 8 0.6154 0.922 0.567 NA NA

TEAD4 MA0809.3 D 8 0.6154 0.895 0.551 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 725 (21.07%)
Max nb of predicted sites per peak: 10
(chr8:12719580-12720171)
Mean nb of predicted sites per peak: 1.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv5_m1

k-mer sig=16.39; evalue=4.1e-17

cmCTCCCACac

GTGTGGGAGKG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmCTCCCACac

Wt1 MA1627.2 D 10 0.9091 0.823 0.748 NA NA

EGR1 MA0162.5 D 10 0.9091 0.798 0.725 NA NA

EGR4 MA0733.2 D 10 0.8333 0.761 0.634 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 974 (28.31%)
Max nb of predicted sites per peak: 10
(chr17:15544010-15544910)
Mean nb of predicted sites per peak: 1.31

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_mkv5_m2

k-mer sig=16.35; evalue=4.5e-17

kyCAAGGACAsa

TSTGTCCTTGRM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kyCAAGGACAsa

ESRRB MA0141.4 D 10 0.8333 0.833 0.695 NA NA

Nr5A2 MA0505.3 R 9 0.7500 0.871 0.653 NA NA

ESRRA MA0592.4 D 9 0.7500 0.866 0.650 NA NA

Total matches= 14 (11 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 699 (20.31%)
Max nb of predicted sites per peak: 3
(chr7:111638385-111639216)
Mean nb of predicted sites per peak: 1.11

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_mkv5_m3

k-mer sig=15.02; evalue=9.5e-16

kyCAAGGTCAsa

TSTGACCTTGRM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kyCAAGGTCAsa

ESRRB MA0141.4 D 10 0.8333 0.960 0.800 NA NA

ESRRA MA0592.4 D 9 0.7500 0.988 0.741 NA NA

RORA MA0071.1 D 10 0.8333 0.880 0.733 NA NA

Total matches= 47 (44 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 788 (22.90%)
Max nb of predicted sites per peak: 8
(chr1:51481733-51482106)
Mean nb of predicted sites per peak: 1.16

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_mkv5_m4

k-mer sig=10.30; evalue=5e-11

wrTGACTCAyw

WRTGAGTCAYW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wrTGACTCAyw

BACH2 MA1101.3 D 11 1.0000 0.866 0.866 NA NA

FOSL2 MA0478.2 D 10 0.9091 0.947 0.861 NA NA

NFE2 MA0841.2 D 10 0.9091 0.911 0.828 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 766 (22.26%)
Max nb of predicted sites per peak: 3
(chr8:60859307-60859973)
Mean nb of predicted sites per peak: 1.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_mkv5_m5

k-mer sig=10.02; evalue=9.5e-11

wwACAATGTAdc

GHTACATTGTWW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wwACAATGTAdc

Dmrt1 MA1603.2 D 9 0.7500 0.887 0.665 NA NA

Sox17 MA0078.3 D 9 0.6923 0.795 0.550 NA NA

SRY MA0084.2 D 7 0.5833 0.931 0.543 NA NA

Total matches= 21 (18 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1090 (31.68%)
Max nb of predicted sites per peak: 68
(chr1:54820677-54821665)
Mean nb of predicted sites per peak: 2.27

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_7nt_m1

k-mer sig=32.51; evalue=3.1e-33

gwwACAATGTawc

GWTACATTGTWWC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gwwACAATGTawc

Dmrt1 MA1603.2 D 9 0.6923 0.878 0.608 NA NA

Sox17 MA0078.3 D 10 0.7692 0.775 0.596 NA NA

Sox6 MA0515.1 R 10 0.7692 0.752 0.578 NA NA

Total matches= 20 (17 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1149 (33.39%)
Max nb of predicted sites per peak: 74
(chr1:179162920-179164412)
Mean nb of predicted sites per peak: 2.58

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_7nt_m2

k-mer sig=16.85; evalue=1.4e-17

dktCAAGGTCAsm

KSTGACCTTGAMH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dktCAAGGTCAsm

NR5A1 MA1540.3 D 11 0.7857 0.957 0.752 NA NA

ESRRB MA0141.4 D 10 0.7692 0.977 0.751 NA NA

ESRRA MA0592.4 D 9 0.6923 0.995 0.689 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 877 (25.49%)
Max nb of predicted sites per peak: 8
(chr1:51481733-51482106)
Mean nb of predicted sites per peak: 1.17

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_7nt_m3

k-mer sig=12.07; evalue=8.5e-13

tsTGACTCAtbc

GVATGAGTCASA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tsTGACTCAtbc

BACH2 MA1101.3 D 11 0.9167 0.895 0.821 NA NA

FOSL2 MA0478.2 D 10 0.8333 0.931 0.776 NA NA

Mafg MA0659.4 D 12 1.0000 0.773 0.773 NA NA

Total matches= 34 (31 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 570 (16.56%)
Max nb of predicted sites per peak: 3
(chr8:60859307-60859973)
Mean nb of predicted sites per peak: 1.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_7nt_m4

k-mer sig=9.84; evalue=1.4e-10

bwcACATTCCTgws

SWCAGGAATGTGWV

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor bwcACATTCCTgws

TEAD1 MA0090.4 D 9 0.6429 0.879 0.565 NA NA

TEAD3 MA0808.1 D 8 0.5714 0.905 0.517 NA NA

IKZF1 MA1508.2 R 8 0.5714 0.889 0.508 NA NA

Total matches= 8 (5 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 775 (22.52%)
Max nb of predicted sites per peak: 5
(chr9:20499360-20500379)
Mean nb of predicted sites per peak: 1.16

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_7nt_m5

k-mer sig=32.51; evalue=3.1e-33

gwtACAtTGTawCwat

ATWGWTACAATGTAWC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gwtACAtTGTawCwat

DMRTA1 MA1707.2 R 10 0.6250 0.885 0.553 NA NA

Dmrt1 MA1603.2 R 9 0.5625 0.910 0.512 NA NA

DMRTC2 MA1479.2 R 10 0.5882 0.856 0.504 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 1139 (33.10%)
Max nb of predicted sites per peak: 80
(chr1:179162920-179164412)
Mean nb of predicted sites per peak: 2.90

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: sertoli (29/05/2025 21:04)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gmaACAtTGTaACAaTGTwdc

DMRTA1 MA1707.2 R 10 0.4762 0.912 0.434 NA NA

DMRTC2 MA1479.2 R 11 0.5238 0.776 0.406 NA NA

Total matches= 2

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: sertoli (29/05/2025 21:04)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor gmaACAtTGTaACAaTGTwdc DMRTA1 MA1707.2 R 10 0.4762 0.912 0.434 NA NA DMRTC2 MA1479.2 R 11 0.5238 0.776 0.406 NA NA Total matches= 2

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gmaACAtTGTaACAaTGTwdc

DMRTA1 MA1707.2 R 10 0.4762 0.912 0.434 NA NA

DMRTC2 MA1479.2 R 11 0.5238 0.776 0.406 NA NA

Total matches= 2