/var/www/html/rsat/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title morc3chip_thresh5_mergedist200 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	2399
	Sum of sequence lengths      	433389
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	180
	Possible positions           	430990
 Oligonucleotide statistics:
	Total occurrences    	144358
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	430990
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	19	380
	2	-24	[-479,-460]	-469.5	20	399
	3	-23	[-459,-440]	-449.5	21	402
	4	-22	[-439,-420]	-429.5	22	422
	5	-21	[-419,-400]	-409.5	24	460
	6	-20	[-399,-380]	-389.5	25	484
	7	-19	[-379,-360]	-369.5	26	508
	8	-18	[-359,-340]	-349.5	28	534
	9	-17	[-339,-320]	-329.5	31	598
	10	-16	[-319,-300]	-309.5	33	636
	11	-15	[-299,-280]	-289.5	40	754
	12	-14	[-279,-260]	-269.5	49	873
	13	-13	[-259,-240]	-249.5	61	1095
	14	-12	[-239,-220]	-229.5	86	1490
	15	-11	[-219,-200]	-209.5	123	2142
	16	-10	[-199,-180]	-189.5	180	3013
	17	-9	[-179,-160]	-169.5	274	4640
	18	-8	[-159,-140]	-149.5	401	6819
	19	-7	[-139,-120]	-129.5	595	10054
	20	-6	[-119,-100]	-109.5	844	14406
	21	-5	[-99,-80]	-89.5	1141	19916
	22	-4	[-79,-60]	-69.5	1511	26840
	23	-3	[-59,-40]	-49.5	1884	34427
	24	-2	[-39,-20]	-29.5	2174	40961
	25	-1	[-19,0]	-9.5	2382	45593
	26	0	[1,20]	10.5	2362	45181
	27	1	[21,40]	30.5	2156	40386
	28	2	[41,60]	50.5	1865	33720
	29	3	[61,80]	70.5	1490	26081
	30	4	[81,100]	90.5	1120	19326
	31	5	[101,120]	110.5	826	13900
	32	6	[121,140]	130.5	573	9676
	33	7	[141,160]	150.5	393	6573
	34	8	[161,180]	170.5	267	4452
	35	9	[181,200]	190.5	176	2904
	36	10	[201,220]	210.5	116	2071
	37	11	[221,240]	230.5	84	1438
	38	12	[241,260]	250.5	61	1068
	39	13	[261,280]	270.5	48	854
	40	14	[281,300]	290.5	40	739
	41	15	[301,320]	310.5	33	634
	42	16	[321,340]	330.5	31	590
	43	17	[341,360]	350.5	28	530
	44	18	[361,380]	370.5	26	505
	45	19	[381,400]	390.5	25	483
	46	20	[401,420]	410.5	24	455
	47	21	[421,440]	430.5	21	420
	48	22	[441,460]	450.5	20	400
	49	23	[461,480]	470.5	20	397
	50	24	[481,500]	490.5	19	361

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
aa aa 10450 1314.6 49 0.0e+00 0 300 1 22 20 33 24 24 28 37 47 35 37 42 41 49 63 76 85 146 186 221 345 472 556 871 851 1019 954 810 653 571 440 342 265 173 117 122 109 79 58 47 50 34 35 35 33 39 29 36 33 37 19
ca ca 10816 1017.9 49 0.0e+00 0 300 2 19 33 29 32 31 32 32 33 42 34 48 48 51 59 96 100 146 190 280 340 496 585 735 899 1068 1076 913 758 551 434 330 278 184 130 127 80 78 52 56 38 36 27 32 22 29 28 23 31 25 20
ac ac 7918 971.8 49 0.0e+00 0 300 3 16 29 25 20 21 24 24 22 23 29 24 41 43 56 72 84 109 129 202 275 365 421 537 651 810 755 660 536 380 302 245 194 118 123 78 55 58 43 42 33 30 30 30 21 25 24 21 25 18 20
ct ct 10921 967.3 49 0.0e+00 0 300 4 29 24 32 29 20 41 31 32 27 39 51 42 64 70 91 98 155 211 286 356 469 597 737 943 1116 1093 928 775 553 457 324 232 182 141 84 78 52 51 40 47 30 28 27 40 33 28 27 28 26 27
cc cc 9661 898.5 49 0.0e+00 0 300 5 16 22 25 30 17 39 24 34 29 34 29 69 62 62 75 97 119 174 213 322 449 529 695 845 1036 971 746 640 538 374 308 244 154 94 75 66 58 40 54 33 16 31 36 16 28 28 14 24 15 12
ag ag 11007 832.1 49 0.0e+00 0 300 6 25 24 21 27 31 22 36 35 36 31 38 49 46 69 96 99 133 197 260 345 455 601 781 977 1054 1059 882 803 603 492 358 271 216 145 132 87 73 52 36 33 40 27 22 26 30 29 25 22 28 28
ga ga 9321 744.0 49 0.0e+00 0 300 7 19 23 16 18 22 21 27 24 25 24 30 42 35 69 81 94 105 160 206 322 365 501 660 822 928 870 737 639 526 409 343 236 185 133 101 83 53 50 38 29 39 24 21 29 26 28 19 18 22 24
tg tg 10723 724.7 49 0.0e+00 0 300 8 25 27 17 23 28 19 23 26 24 37 44 30 60 63 81 118 149 195 285 370 424 599 728 948 1111 1097 892 730 559 455 343 244 192 144 95 70 45 53 43 55 31 23 17 34 28 24 21 20 28 26
tc tc 8953 718.9 49 0.0e+00 0 300 9 27 18 26 25 20 41 22 23 27 32 44 40 38 53 71 70 126 192 229 275 393 479 611 711 913 921 771 674 478 381 285 198 143 97 71 75 50 38 38 26 20 20 27 23 22 25 15 20 15 14
ta ta 6482 647.2 49 0.0e+00 0 300 10 18 12 17 16 25 21 22 16 20 18 21 25 36 50 47 67 93 118 174 240 265 375 464 500 610 585 549 464 340 291 216 155 112 85 75 45 38 31 29 20 25 27 15 18 17 13 18 7 18 19
at at 7710 612.9 49 0.0e+00 0 300 11 14 14 18 17 25 28 22 16 27 21 33 28 30 53 54 79 106 146 180 283 320 430 526 601 760 729 662 525 419 356 278 194 143 97 87 66 41 36 44 25 28 19 19 18 19 15 12 12 20 15
gc gc 8952 597.2 49 0.0e+00 0 300 12 16 17 16 25 19 17 26 25 31 28 36 37 46 46 75 89 120 158 224 285 364 479 612 798 939 925 741 628 461 384 267 218 166 101 101 70 55 39 31 41 29 17 16 18 19 16 24 16 24 17
tt tt 9878 543.2 49 0.0e+00 0 300 13 26 9 20 24 23 30 27 20 19 29 37 47 53 55 79 88 149 204 249 333 489 564 674 772 1019 1023 869 771 573 411 261 192 146 112 61 59 44 48 35 28 26 28 15 18 24 27 19 20 12 17
gt gt 7540 493.5 49 0.0e+00 0 300 14 26 18 11 18 27 11 14 18 19 29 22 24 37 41 55 91 104 155 212 237 317 419 534 628 729 806 635 560 400 329 223 170 119 102 58 49 41 33 29 29 19 24 13 14 15 21 11 10 14 20
gg gg 9932 422.9 49 0.0e+00 0 300 15 22 20 14 9 27 17 29 18 29 26 35 27 54 70 71 94 117 189 251 312 388 539 737 826 1016 965 868 735 618 469 302 243 173 139 89 66 38 37 28 37 26 28 16 16 17 23 15 17 13 17
cg cg 4094 216.8 49 5.6e-23 9e-22 21.05 16 8 9 5 9 9 9 8 5 12 14 7 21 16 21 34 50 57 73 94 145 169 193 287 339 453 424 331 311 224 170 134 94 78 51 33 38 35 16 14 18 14 11 10 4 6 7 9 1 5 9 
 Host name	rsat
 Job started	2025-06-03.065448
 Job done	2025-06-03.065450
 Seconds	2.26
	user	2.26
	system	0.02
	cuser	0.01
;	csystem	0