One-to-n alignments

Command: compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/06/03/peak-motifs.2025-06-03.065440_2025-06-03.065440_xAFzzE/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m5_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m5_shift0 (oligos_7nt_mkv4_m5)
; oligos_7nt_mkv4_m5; m=0 (reference); ncol1=12; shift=0; ncol=12; TkCCGrAACCmG ; Alignment reference a 34 56 2 12 8 342 687 703 4 1 383 60 c 33 41 707 667 11 21 8 7 700 705 275 35 g 40 257 9 11 692 353 22 4 4 8 24 595 t 612 365 1 29 8 3 2 5 11 5 37 29

oligos_7nt_mkv4_m5_shift0 (oligos_7nt_mkv4_m5)
; oligos_7nt_mkv4_m5 versus oligos_7nt_mkv4_m5; m=1/1; ncol2=12; w=0; offset=0; strand=D; shift=0; score= 1; TkCCGrAACCmG ; cor=; Ncor= a 34 56 2 12 8 342 687 703 4 1 383 60 c 33 41 707 667 11 21 8 7 700 705 275 35 g 40 257 9 11 692 353 22 4 4 8 24 595 t 612 365 1 29 8 3 2 5 11 5 37 29

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m5_shift1 ; 4 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)
; oligos_6nt_mkv3_m5; m=0 (reference); ncol1=12; shift=1; ncol=13; -yyyGCGGCAarr ; Alignment reference a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99

oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)
; oligos_6nt_mkv3_m5 versus oligos_6nt_mkv3_m5; m=1/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score= 1; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99

oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)
; oligos_6nt_mkv3_m5 versus oligos_7nt_mkv4_m3; m=2/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score=0.917557; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77

oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)
; oligos_6nt_mkv3_m5 versus oligos_6nt_mkv3_m1; m=3/3; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.877909; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m4_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m4_shift0 (oligos_7nt_mkv4_m4)
; oligos_7nt_mkv4_m4; m=0 (reference); ncol1=12; shift=0; ncol=12; msACAGCTCCys ; Alignment reference a 176 147 569 6 587 7 12 38 16 9 109 82 c 161 194 12 584 14 33 587 11 558 566 301 280 g 135 215 12 11 8 470 6 15 21 13 41 194 t 146 62 25 17 9 108 13 554 23 30 167 62

oligos_7nt_mkv4_m4_shift0 (oligos_7nt_mkv4_m4)
; oligos_7nt_mkv4_m4 versus oligos_7nt_mkv4_m4; m=1/1; ncol2=12; w=0; offset=0; strand=D; shift=0; score= 1; msACAGCTCCys ; cor=; Ncor= a 176 147 569 6 587 7 12 38 16 9 109 82 c 161 194 12 584 14 33 587 11 558 566 301 280 g 135 215 12 11 8 470 6 15 21 13 41 194 t 146 62 25 17 9 108 13 554 23 30 167 62

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m3_shift1 ; 4 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)
; oligos_7nt_mkv4_m3; m=0 (reference); ncol1=12; shift=1; ncol=13; -yyTGCgGCAAra ; Alignment reference a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77

oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)
; oligos_7nt_mkv4_m3 versus oligos_7nt_mkv4_m3; m=1/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score= 1; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77

oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)
; oligos_7nt_mkv4_m3 versus oligos_6nt_mkv3_m1; m=2/3; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.91791; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103

oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)
; oligos_7nt_mkv4_m3 versus oligos_6nt_mkv3_m5; m=3/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score=0.917557; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m4_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m4_shift0 (oligos_6nt_mkv3_m4)
; oligos_6nt_mkv3_m4; m=0 (reference); ncol1=10; shift=0; ncol=10; dtAATAAArm ; Alignment reference a 254 206 957 976 0 984 915 940 457 289 c 119 160 0 2 1 0 19 9 94 251 g 314 186 5 7 1 1 5 0 267 205 t 299 434 24 1 984 1 47 37 168 241

oligos_6nt_mkv3_m4_shift0 (oligos_6nt_mkv3_m4)
; oligos_6nt_mkv3_m4 versus oligos_6nt_mkv3_m4; m=1/1; ncol2=10; w=0; offset=0; strand=D; shift=0; score= 1; dtAATAAArm ; cor=; Ncor= a 254 206 957 976 0 984 915 940 457 289 c 119 160 0 2 1 0 19 9 94 251 g 314 186 5 7 1 1 5 0 267 205 t 299 434 24 1 984 1 47 37 168 241

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m3_shift0 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m3_shift0 (oligos_6nt_mkv3_m3)
; oligos_6nt_mkv3_m3; m=0 (reference); ncol1=13; shift=0; ncol=13; ttTCRGCACCArc ; Alignment reference a 118 93 49 8 604 13 14 756 3 5 655 295 121 c 88 67 121 778 8 11 777 6 825 822 42 146 430 g 131 184 77 4 222 792 22 63 2 8 64 247 164 t 502 495 592 49 5 23 26 14 9 4 78 151 124

oligos_6nt_mkv3_m3_shift0 (oligos_6nt_mkv3_m3)
; oligos_6nt_mkv3_m3 versus oligos_6nt_mkv3_m3; m=1/2; ncol2=13; w=0; offset=0; strand=D; shift=0; score= 1; ttTCRGCACCArc ; cor=; Ncor= a 118 93 49 8 604 13 14 756 3 5 655 295 121 c 88 67 121 778 8 11 777 6 825 822 42 146 430 g 131 184 77 4 222 792 22 63 2 8 64 247 164 t 502 495 592 49 5 23 26 14 9 4 78 151 124

oligos_7nt_mkv4_m1_shift0 (oligos_7nt_mkv4_m1)
; oligos_6nt_mkv3_m3 versus oligos_7nt_mkv4_m1; m=2/2; ncol2=13; w=0; offset=0; strand=D; shift=0; score=0.992324; ttTCRGCACCarc ; cor=; Ncor= a 87 106 37 4 577 14 18 761 6 5 525 295 118 c 83 67 49 728 1 10 720 6 725 769 60 125 354 g 137 125 35 6 202 754 24 3 1 5 67 265 170 t 478 487 664 47 5 7 23 15 53 6 133 100 143

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m2_shift1 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m2_shift1 (oligos_7nt_mkv4_m2)
; oligos_7nt_mkv4_m2; m=0 (reference); ncol1=12; shift=1; ncol=13; -ktGCTGTCCAyg ; Alignment reference a 0 54 130 14 14 10 37 10 5 8 405 58 115 c 0 132 107 9 536 4 114 10 545 551 41 157 135 g 0 212 118 463 9 16 404 20 8 2 76 111 209 t 0 169 212 81 8 537 12 527 9 6 45 241 108

oligos_7nt_mkv4_m2_shift1 (oligos_7nt_mkv4_m2)
; oligos_7nt_mkv4_m2 versus oligos_7nt_mkv4_m2; m=1/2; ncol2=12; w=0; offset=0; strand=D; shift=1; score= 1; -ktGCTGTCCAyg ; cor=; Ncor= a 0 54 130 14 14 10 37 10 5 8 405 58 115 c 0 132 107 9 536 4 114 10 545 551 41 157 135 g 0 212 118 463 9 16 404 20 8 2 76 111 209 t 0 169 212 81 8 537 12 527 9 6 45 241 108

oligos_6nt_mkv3_m2_shift0 (oligos_6nt_mkv3_m2)
; oligos_7nt_mkv4_m2 versus oligos_6nt_mkv3_m2; m=2/2; ncol2=12; w=-1; offset=-1; strand=D; shift=0; score=0.652644; stGTCTGTCCtk- ; cor=; Ncor= a 139 114 30 16 4 11 14 4 2 27 147 73 0 c 174 118 62 23 610 35 18 7 598 513 151 91 0 g 202 95 436 43 7 15 522 46 22 5 77 189 0 t 117 305 104 550 11 571 78 575 10 87 257 279 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m1_shift0 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m1_shift0 (oligos_7nt_mkv4_m1)
; oligos_7nt_mkv4_m1; m=0 (reference); ncol1=13; shift=0; ncol=13; ttTCRGCACCarc ; Alignment reference a 87 106 37 4 577 14 18 761 6 5 525 295 118 c 83 67 49 728 1 10 720 6 725 769 60 125 354 g 137 125 35 6 202 754 24 3 1 5 67 265 170 t 478 487 664 47 5 7 23 15 53 6 133 100 143

oligos_7nt_mkv4_m1_shift0 (oligos_7nt_mkv4_m1)
; oligos_7nt_mkv4_m1 versus oligos_7nt_mkv4_m1; m=1/2; ncol2=13; w=0; offset=0; strand=D; shift=0; score= 1; ttTCRGCACCarc ; cor=; Ncor= a 87 106 37 4 577 14 18 761 6 5 525 295 118 c 83 67 49 728 1 10 720 6 725 769 60 125 354 g 137 125 35 6 202 754 24 3 1 5 67 265 170 t 478 487 664 47 5 7 23 15 53 6 133 100 143

oligos_6nt_mkv3_m3_shift0 (oligos_6nt_mkv3_m3)
; oligos_7nt_mkv4_m1 versus oligos_6nt_mkv3_m3; m=2/2; ncol2=13; w=0; offset=0; strand=D; shift=0; score=0.992324; ttTCRGCACCArc ; cor=; Ncor= a 118 93 49 8 604 13 14 756 3 5 655 295 121 c 88 67 121 778 8 11 777 6 825 822 42 146 430 g 131 184 77 4 222 792 22 63 2 8 64 247 164 t 502 495 592 49 5 23 26 14 9 4 78 151 124

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m2_shift0 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m2_shift0 (oligos_6nt_mkv3_m2)
; oligos_6nt_mkv3_m2; m=0 (reference); ncol1=12; shift=0; ncol=12; stGTCTGTCCtk ; Alignment reference a 139 114 30 16 4 11 14 4 2 27 147 73 c 174 118 62 23 610 35 18 7 598 513 151 91 g 202 95 436 43 7 15 522 46 22 5 77 189 t 117 305 104 550 11 571 78 575 10 87 257 279

oligos_6nt_mkv3_m2_shift0 (oligos_6nt_mkv3_m2)
; oligos_6nt_mkv3_m2 versus oligos_6nt_mkv3_m2; m=1/2; ncol2=12; w=0; offset=0; strand=D; shift=0; score= 1; stGTCTGTCCtk ; cor=; Ncor= a 139 114 30 16 4 11 14 4 2 27 147 73 c 174 118 62 23 610 35 18 7 598 513 151 91 g 202 95 436 43 7 15 522 46 22 5 77 189 t 117 305 104 550 11 571 78 575 10 87 257 279

oligos_7nt_mkv4_m2_shift1 (oligos_7nt_mkv4_m2)
; oligos_6nt_mkv3_m2 versus oligos_7nt_mkv4_m2; m=2/2; ncol2=12; w=0; offset=1; strand=D; shift=1; score=0.652644; -ktGCTGTCCAy ; cor=; Ncor= a 0 54 130 14 14 10 37 10 5 8 405 58 c 0 132 107 9 536 4 114 10 545 551 41 157 g 0 212 118 463 9 16 404 20 8 2 76 111 t 0 169 212 81 8 537 12 527 9 6 45 241

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m1_shift0 ; 4 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)
; oligos_6nt_mkv3_m1; m=0 (reference); ncol1=13; shift=0; ncol=13; kyyTGCGGCAAra ; Alignment reference a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103

oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)
; oligos_6nt_mkv3_m1 versus oligos_6nt_mkv3_m1; m=1/3; ncol2=13; w=0; offset=0; strand=D; shift=0; score= 1; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103

oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)
; oligos_6nt_mkv3_m1 versus oligos_7nt_mkv4_m3; m=2/3; ncol2=12; w=0; offset=1; strand=D; shift=1; score=0.91791; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77

oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)
; oligos_6nt_mkv3_m1 versus oligos_6nt_mkv3_m5; m=3/3; ncol2=12; w=0; offset=1; strand=D; shift=1; score=0.877909; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)				; oligos_6nt_mkv3_m5; m=0 (reference); ncol1=12; shift=1; ncol=13; -yyyGCGGCAarr ; Alignment reference a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99
oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)				; oligos_6nt_mkv3_m5 versus oligos_6nt_mkv3_m5; m=1/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score= 1; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99
oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)				; oligos_6nt_mkv3_m5 versus oligos_7nt_mkv4_m3; m=2/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score=0.917557; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77
oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)				; oligos_6nt_mkv3_m5 versus oligos_6nt_mkv3_m1; m=3/3; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.877909; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)				; oligos_7nt_mkv4_m3; m=0 (reference); ncol1=12; shift=1; ncol=13; -yyTGCgGCAAra ; Alignment reference a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77
oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)				; oligos_7nt_mkv4_m3 versus oligos_7nt_mkv4_m3; m=1/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score= 1; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77
oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)				; oligos_7nt_mkv4_m3 versus oligos_6nt_mkv3_m1; m=2/3; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.91791; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103
oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)				; oligos_7nt_mkv4_m3 versus oligos_6nt_mkv3_m5; m=3/3; ncol2=12; w=0; offset=0; strand=D; shift=1; score=0.917557; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)				; oligos_6nt_mkv3_m1; m=0 (reference); ncol1=13; shift=0; ncol=13; kyyTGCGGCAAra ; Alignment reference a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103
oligos_6nt_mkv3_m1_shift0 (oligos_6nt_mkv3_m1)				; oligos_6nt_mkv3_m1 versus oligos_6nt_mkv3_m1; m=1/3; ncol2=13; w=0; offset=0; strand=D; shift=0; score= 1; kyyTGCGGCAAra ; cor=; Ncor= a 131 160 131 55 4 8 130 3 7 1029 782 340 485 c 175 310 349 180 11 1032 51 10 925 27 131 247 244 g 337 261 125 80 1063 8 776 1062 117 18 121 340 246 t 435 347 473 763 0 30 121 3 29 4 44 151 103
oligos_7nt_mkv4_m3_shift1 (oligos_7nt_mkv4_m3)				; oligos_6nt_mkv3_m1 versus oligos_7nt_mkv4_m3; m=2/3; ncol2=12; w=0; offset=1; strand=D; shift=1; score=0.91791; -yyTGCgGCAAra ; cor=; Ncor= a 0 112 96 20 1 8 132 1 6 863 756 304 428 c 0 257 259 110 5 847 43 6 740 12 70 175 201 g 0 202 97 21 880 7 589 877 114 8 41 290 180 t 0 315 434 735 0 24 122 2 26 3 19 117 77
oligos_6nt_mkv3_m5_shift1 (oligos_6nt_mkv3_m5)				; oligos_6nt_mkv3_m1 versus oligos_6nt_mkv3_m5; m=3/3; ncol2=12; w=0; offset=1; strand=D; shift=1; score=0.877909; -yyyGCGGCAarr ; cor=; Ncor= a 0 149 131 76 11 3 26 8 15 723 415 237 270 c 0 204 306 352 25 768 19 22 702 25 166 183 175 g 0 190 132 92 736 5 732 735 31 27 148 232 238 t 0 239 213 262 10 6 5 17 34 7 53 130 99