; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/04/oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/04/oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/04/oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/06/04/oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/06/04/oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 55 53 9 143 146 142 16 4 6 11 52 62
c 17 14 7 3 1 2 101 3 1 128 41 18
g 25 28 126 0 0 4 10 1 3 7 10 16
t 52 54 7 3 2 1 22 141 139 3 46 53
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m1_rc.png
;
a 30 43 77 24 93 93 97 14 8 6 97 98 20 36 39
c 23 19 7 62 7 3 2 4 1 94 4 2 70 18 25
g 17 19 7 8 1 4 2 74 3 0 0 1 7 16 11
t 35 24 14 11 4 5 4 13 93 5 4 4 8 35 30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m2_rc.png
;
a 45 38 27 125 3 3 124 1 1 38 46 53
c 12 21 21 2 124 1 0 0 0 42 23 18
g 18 23 42 0 0 0 1 124 2 21 21 12
t 53 46 38 1 1 124 3 3 125 27 38 45
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m3_rc.png
;
a 67 97 184 14 195 192 12 189 196 30 105 108 69
c 57 41 10 182 3 7 180 7 3 157 30 27 60
g 25 29 2 5 3 0 4 3 4 2 19 18 31
t 57 39 10 5 5 7 10 7 3 17 52 53 46
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m4_rc.png
;
a 137 122 23 15 12 18 52 359 350 130 150
c 70 67 306 16 9 330 311 12 13 61 59
g 52 54 13 4 5 13 10 2 4 80 52
t 131 147 48 355 364 29 17 17 23 119 129
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m5_rc.png
;
a 23 27 0 0 0 67 0 67 21 28
c 6 8 0 0 0 0 0 0 11 7
g 14 14 67 0 67 0 67 0 15 8
t 24 18 0 67 0 0 0 0 20 24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m6_rc.png
;
a 134 112 268 24 291 295 299 29 52 130 123
c 64 74 9 263 9 0 0 10 206 48 45
g 32 59 13 10 1 4 2 245 18 32 49
t 78 63 18 11 7 9 7 24 32 98 91
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m7_rc.png
;
a 46 61 4 6 6 14 10 148 148 146 61 61
c 15 15 3 6 0 4 5 5 2 0 23 14
g 26 20 4 131 7 129 134 3 2 5 28 16
t 72 63 148 16 146 12 10 3 7 8 47 68
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m8_rc.png
;
a 31 32 0 123 0 0 0 0 50 34
c 27 20 123 0 0 0 0 123 15 25
g 16 17 0 0 0 0 0 0 8 15
t 49 54 0 0 123 123 123 0 50 49
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m9_rc.png
;
a 52 59 16 173 7 6 5 4 15 70 57
c 36 36 154 2 164 3 4 12 146 32 29
g 30 24 5 2 5 5 2 155 5 25 27
t 69 68 12 10 11 173 176 16 21 60 74
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m10_rc.png
;
a 186 197 53 494 486 47 458 59 493 206 218
c 86 96 395 11 9 19 16 408 10 102 73
g 69 60 25 3 6 16 12 19 4 51 67
t 180 168 48 13 20 439 35 35 14 162 163
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m11_rc.png
;
a 28 17 0 58 0 0 58 58 25 26
c 4 6 0 0 0 58 0 0 7 10
g 6 14 58 0 58 0 0 0 6 7
t 20 21 0 0 0 0 0 0 20 15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m12_rc.png
;
a 19 31 66 0 0 0 0 66 23 27
c 19 10 0 66 0 66 66 0 12 15
g 8 7 0 0 0 0 0 0 8 9
t 20 18 0 0 66 0 0 0 23 15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m13_rc.png
;
a 97 89 27 245 18 18 240 11 9 76 77 103
c 25 33 21 5 215 6 2 7 1 42 46 40
g 43 47 174 3 11 1 2 224 3 50 45 35
t 95 91 38 7 16 235 16 18 247 92 92 82
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/04//oligo-analysis_2025-06-04.115642_D9nrWP_pssm_count_matrices_logo_m14_rc.png
;
; Host name rsat
; Job started 2025-06-04.115651
; Job done 2025-06-04.115655
; Seconds 0.21
; user 0.21
; system 0.15
; cuser 3.43
; csystem 0.59