; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	9	8	2	38	4	0	38	0	0	0	13	11
c	13	10	12	0	0	2	1	39	0	24	9	5
g	10	12	4	1	35	0	0	1	39	9	11	14
t	8	10	22	1	1	38	1	0	1	7	7	10
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m1_rc.png
;
a	6	3	1	16	0	1	0	16	14	0	4	1
c	5	5	0	0	16	1	17	0	2	15	9	3
g	3	5	0	1	1	0	0	0	0	1	3	4
t	3	4	16	0	0	15	0	1	1	1	1	9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m2_rc.png
;
a	38	27	8	7	5	2	2	118	111	27	26
c	39	38	117	125	6	2	132	13	13	42	45
g	31	47	12	3	4	132	3	3	8	47	45
t	32	28	3	5	125	4	3	6	8	24	24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.094805_VDm2zw_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-06-19.094813
; Job done	2025-06-19.094813
; Seconds	0.11
;	user	0.11
;	system	0.04
;	cuser	0.69
;	csystem	0.12