; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	30	30	121	130	7	2	0	4	13	40	35
c	43	56	17	9	12	6	5	140	120	51	35
g	53	42	9	6	5	9	144	4	7	35	42
t	25	23	4	6	127	134	2	3	11	25	39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m1_rc.png
;
a	11	22	1	48	0	49	3	50	3	50	9	18
c	21	12	52	1	48	1	8	2	6	0	17	9
g	14	11	0	4	2	2	0	0	1	1	8	10
t	7	8	0	0	3	1	42	1	43	2	19	16
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m2_rc.png
;
a	13	11	3	6	3	1	66	6	68	16	30
c	21	17	73	66	2	6	5	3	0	19	14
g	28	33	2	3	70	71	4	5	9	14	19
t	16	17	0	3	3	0	3	64	1	29	15
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m3_rc.png
;
a	13	18	0	0	0	0	66	66	19	15
c	17	17	0	0	0	66	0	0	12	21
g	21	12	0	0	66	0	0	0	17	17
t	15	19	66	66	0	0	0	0	18	13
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m4_rc.png
;
a	6	4	19	0	19	0	0	19	4	8	2
c	3	6	0	0	0	0	0	0	3	4	4
g	5	2	0	0	0	0	0	0	1	3	6
t	5	7	0	19	0	19	19	0	11	4	7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100120_rQ3AcR_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-06-19.100127
; Job done	2025-06-19.100128
; Seconds	0.16
;	user	0.16
;	system	0.04
;	cuser	1.1
;	csystem	0.19