; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	7	8	0	0	0	0	1	18	18	14	5	0
c	9	5	18	0	20	0	19	1	0	4	6	9
g	1	5	1	20	0	1	0	1	1	1	5	7
t	3	2	1	0	0	19	0	0	1	1	4	4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m1_rc.png
;
a	7	6	0	5	1	0	33	1	28	7	4
c	9	8	34	1	0	34	0	2	3	12	12
g	11	12	0	1	4	0	0	3	3	10	7
t	7	8	0	27	29	0	1	28	0	5	11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m2_rc.png
;
a	16	22	2	7	2	0	74	76	1	14	18
c	27	22	77	2	2	89	11	7	3	27	22
g	33	34	6	81	87	3	7	5	88	35	41
t	17	15	8	3	2	1	1	5	1	17	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.100607_6jHlwl_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-06-19.100614
; Job done	2025-06-19.100615
; Seconds	0.12
;	user	0.12
;	system	0.03
;	cuser	0.7
;	csystem	0.14