; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101308_9oQwLz_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101308_9oQwLz_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101308_9oQwLz_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101308_9oQwLz_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 4 4 2 0 3 23 0 1 24 0 7 4
c 5 10 1 0 1 2 0 25 0 25 5 6
g 10 4 3 26 22 1 26 0 0 1 11 7
t 7 8 20 0 0 0 0 0 2 0 3 9
//
a 6 3 0 0 28 0 0 0 10 7
c 11 5 28 28 0 0 0 28 9 4
g 10 12 0 0 0 0 0 0 3 7
t 1 8 0 0 0 28 28 0 6 10
//
a 7 2 16 17 1 1 1 0 0 16 3 5
c 2 9 2 0 0 0 14 0 1 0 3 8
g 5 3 0 1 1 0 1 0 17 0 8 1
t 4 4 0 0 16 17 2 18 0 2 4 4
//
a 13 11 5 51 53 3 0 1 8 1 17 11
c 12 7 3 0 0 1 1 0 38 36 14 9
g 13 18 45 3 1 3 50 52 5 11 16 17
t 16 18 1 0 0 47 3 1 3 6 7 17
//
a 9 12 41 1 0 0 1 41 0 11 8
c 15 22 1 2 4 2 43 4 47 12 11
g 14 10 2 45 2 8 3 2 1 16 20
t 10 4 4 0 42 38 1 1 0 9 9
//
; Host name rsat
; Job started 2025-06-19.101314
; Job done 2025-06-19.101314
; Seconds 0.12
; user 0.12
; system 0.02
; cuser 0
; csystem 0