; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	3	2	0	0	0	0	0	0	10	0	0	2	0
c	0	3	1	10	0	0	0	0	0	10	5	1	1
g	3	5	9	0	10	0	0	10	0	0	0	4	9
t	4	0	0	0	0	10	10	0	0	0	5	3	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m1_rc.png
;
a	0	0	3	3	0	3	3	3	0	3	0	0
c	2	1	0	0	0	0	0	0	0	0	0	3
g	1	0	0	0	0	0	0	0	0	0	3	0
t	0	2	0	0	3	0	0	0	3	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m2_rc.png
;
a	7	6	0	15	15	0	0	0	3	0
c	7	7	15	0	0	15	15	0	8	8
g	0	0	0	0	0	0	0	15	0	1
t	1	2	0	0	0	0	0	0	4	6
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/06/19//oligo-analysis_2025-06-19.101707_7As1Tp_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2025-06-19.101713
; Job done	2025-06-19.101714
; Seconds	0.14
;	user	0.14
;	system	0.03
;	cuser	0.76
;	csystem	0.1