; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.085330_2025-06-19.085330_NC5YGx/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk1_1_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.085330_2025-06-19.085330_NC5YGx/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk1_1_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.085330_2025-06-19.085330_NC5YGx/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk1_1_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.085330_2025-06-19.085330_NC5YGx/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk1_1_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	1	2	0	0	2	0	2	0	2	0	1
c	1	0	0	0	0	0	0	0	0	0	1	1
g	1	0	0	0	0	0	2	0	2	0	1	0
t	0	1	0	2	2	0	0	0	0	0	0	0
//
; Sites	2
>site_0
CAATTAGAGACA
>site_1
GTATTAGAGAGC
a	1	0	0	3	0	0	0	1	0	3	1	1	1
c	0	1	0	0	0	0	0	0	0	0	0	1	0
g	2	2	3	0	3	3	0	0	0	0	2	1	0
t	0	0	0	0	0	0	3	2	3	0	0	0	2
//
; Sites	3
>site_0
GCGAGGTATAAAT
>site_1
AGGAGGTTTAGCT
>site_2
GGGAGGTTTAGGA
a	1	2	0	0	0	0	0	0	5	1	1	0
c	1	1	0	6	0	0	0	1	0	5	1	2
g	2	2	6	0	6	6	6	5	1	0	4	3
t	2	1	0	0	0	0	0	0	0	0	0	1
//
; Sites	6
>site_0
GAGCGGGCACGG
>site_1
TGGCGGGGGCGG
>site_2
CTGCGGGGACGG
>site_3
GCGCGGGGACCC
>site_4
TGGCGGGGAAAT
>site_5
AAGCGGGGACGC
a	1	1	0	0	2	2	0	0	2	2	0	0
c	0	0	0	0	0	0	0	0	0	0	1	1
g	1	1	2	2	0	0	2	0	0	0	1	1
t	0	0	0	0	0	0	0	2	0	0	0	0
//
; Sites	2
>site_0
GAGGAAGTAACG
>site_1
AGGGAAGTAAGC
a	1	1	0	0	0	6	0	0	1	2
c	2	3	6	6	0	0	6	6	3	4
g	1	1	0	0	0	0	0	0	0	0
t	2	1	0	0	6	0	0	0	2	0
//
; Sites	6
>site_0
GTCCTACCCA
>site_1
TCCCTACCAC
>site_2
CACCTACCTC
>site_3
TCCCTACCTC
>site_4
CCCCTACCCC
>site_5
AGCCTACCCA
; Host name	rsat
; Job started	2025-06-19.085339
; Job done	2025-06-19.085339
; Seconds	0.09
;	user	0.09
;	system	0.03
;	cuser	0
;	csystem	0
