; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093456_2025-06-19.093456_nFlB6k/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093456_2025-06-19.093456_nFlB6k/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093456_2025-06-19.093456_nFlB6k/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/06/19/peak-motifs.2025-06-19.093456_2025-06-19.093456_nFlB6k/results/oligos_6-8nt/peak-motifs_oligos-2str-noov_6-8nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	9	4	0	22	23	1	1	20	21	2	5	5
c	4	8	0	1	0	0	1	2	2	19	5	8
g	4	7	24	1	0	23	22	2	1	2	7	6
t	7	5	0	0	1	0	0	0	0	1	7	5
//
; Sites	24
>site_0
AGGCAGGAACTC
>site_1
CCGAAGGCACGA
>site_2
AGGAAGGAATTG
>site_3
TTGAAGGAACGT
>site_4
GAGAAGGCACAG
>site_5
CAGAAGGACCAG
>site_6
AAGATGGAACTC
>site_7
GGGAAGAAACTG
>site_8
TCGAAGGAACAA
>site_9
TAGAAGGGACGA
>site_10
TCGGAGGAACGT
>site_11
TGGAAGGAAGTA
>site_12
CCGAAGGAACCA
>site_13
TTGAAGGAAATT
>site_14
CTGAAGGAACGC
>site_15
GTGAAGGGACGG
>site_16
ACGAAGGAAGAT
>site_17
AGGAAGGAACCC
>site_18
ACGAAGCAACCT
>site_19
ATGAAGGAACCG
>site_20
TCGAAGGAAAGC
>site_21
AGGAAAGAACCC
>site_22
ACGAAGGAGCAC
>site_23
GGGAAGGACCTC
a	6	6	29	0	0	31	0	1	5	8
c	6	5	3	3	0	0	32	3	9	8
g	16	8	0	28	0	0	0	26	6	12
t	4	13	0	1	32	1	0	2	12	4
//
; Sites	32
>site_0
GTACTACGTG
>site_1
CAAGTACGTG
>site_2
GGAGTACGGT
>site_3
CCAGTACGTG
>site_4
GCCGTACGTA
>site_5
GTAGTACCGA
>site_6
TGAGTACGGC
>site_7
GAAGTACGGC
>site_8
GTAGTTCGTA
>site_9
GTACTACGAA
>site_10
GTAGTACGCG
>site_11
ATAGTACGCG
>site_12
GTAGTACATA
>site_13
GTACTACGTA
>site_14
AGAGTACGTA
>site_15
ACAGTACGCT
>site_16
GTAGTACGCG
>site_17
GGAGTACTAG
>site_18
CTAGTACTCC
>site_19
TTAGTACGCC
>site_20
GCAGTACGTG
>site_21
AAAGTACGCA
>site_22
GGAGTACGGT
>site_23
GTCGTACGCG
>site_24
CGCGTACGAC
>site_25
AGAGTACCTT
>site_26
AAAGTACGTG
>site_27
GCAGTACGAG
>site_28
TTATTACGTC
>site_29
TAAGTACCCG
>site_30
CAAGTACGGC
>site_31
CGAGTACGAC
a	12	13	43	0	1	1	57	1	8	9	13
c	16	22	6	61	54	3	1	57	47	24	21
g	26	19	9	1	5	58	1	4	3	18	15
t	8	8	4	0	2	0	3	0	4	11	13
//
; Sites	62
>site_0
TCACCGACACA
>site_1
AAACCGAGCAA
>site_2
GAACCGGCCGA
>site_3
TCACCAACCGA
>site_4
GCACCGTCCGC
>site_5
ATACCCACCTA
>site_6
GAACCGACAAC
>site_7
GGACCGACAGC
>site_8
GCGCCGACCTG
>site_9
GCACCGAACCA
>site_10
CGGCCGACCGT
>site_11
CGACCCACCGT
>site_12
GCTCCGACCCA
>site_13
AATCCGACCCC
>site_14
GCACCGTCCTT
>site_15
TGACCCACCCG
>site_16
GCACCGACTGA
>site_17
TGACCGACTGG
>site_18
ACCCCGACCTG
>site_19
GTACCGACAAG
>site_20
AGACTGACCTC
>site_21
CGACGGACCCC
>site_22
CAACGGACCCT
>site_23
TAACCGAGCGA
>site_24
CTACCGACGAT
>site_25
TAACTGACCGC
>site_26
ACTCCGACCCG
>site_27
TGACCGACTGG
>site_28
GCCCCGACCGC
>site_29
GGACCGACCAG
>site_30
GGTCCGACCAT
>site_31
GGACCGTCCGC
>site_32
CCGCCGACCTA
>site_33
CCACCGACACG
>site_34
ACACCGACCGC
>site_35
GCCCCGACCCC
>site_36
ATGCCGACCCT
>site_37
GGGCCGACCTG
>site_38
AAACCGACAGG
>site_39
GCCCCGACCCT
>site_40
CAACCGACGCA
>site_41
CGGCCGACCAA
>site_42
GAACCGACACT
>site_43
GGACCGACCCC
>site_44
CAACGGACCCC
>site_45
CGACCGACCCC
>site_46
CAACCGACCGC
>site_47
GAACCGACGCC
>site_48
GGCCCGACCTG
>site_49
GCACGGACCCC
>site_50
GCACCGAGCGC
>site_51
GCGCCGACCGC
>site_52
AGACAGACCCG
>site_53
ACACCGACTCT
>site_54
CGCCCGACCAT
>site_55
TCACGGACCCT
>site_56
GTGCCGACCTG
>site_57
GTACCGCCCTT
>site_58
CCAGCGACCTC
>site_59
CTGCCGACCCC
>site_60
CGACCGAGCAG
>site_61
ATACCGACACA
a	9	9	0	0	0	0	0	0	11	9
c	18	19	47	47	47	0	47	47	12	18
g	15	8	0	0	0	47	0	0	14	11
t	5	11	0	0	0	0	0	0	10	9
//
; Sites	47
>site_0
CGCCCGCCAG
>site_1
CGCCCGCCTG
>site_2
TGCCCGCCCA
>site_3
GGCCCGCCGC
>site_4
GCCCCGCCAC
>site_5
CCCCCGCCCC
>site_6
GCCCCGCCGC
>site_7
ACCCCGCCCC
>site_8
CCCCCGCCAA
>site_9
GTCCCGCCAA
>site_10
GTCCCGCCCT
>site_11
ACCCCGCCGA
>site_12
CACCCGCCAA
>site_13
AACCCGCCCC
>site_14
ACCCCGCCGC
>site_15
AGCCCGCCTC
>site_16
TACCCGCCGT
>site_17
CCCCCGCCTT
>site_18
CCCCCGCCAG
>site_19
GTCCCGCCTG
>site_20
TTCCCGCCCA
>site_21
ATCCCGCCCT
>site_22
CCCCCGCCCC
>site_23
ACCCCGCCTC
>site_24
CACCCGCCTT
>site_25
TACCCGCCAT
>site_26
CTCCCGCCGT
>site_27
TTCCCGCCGA
>site_28
GCCCCGCCTG
>site_29
CCCCCGCCGC
>site_30
CCCCCGCCAG
>site_31
ATCCCGCCGG
>site_32
CGCCCGCCAC
>site_33
GCCCCGCCCT
>site_34
CTCCCGCCGG
>site_35
CTCCCGCCAG
>site_36
GACCCGCCGC
>site_37
GCCCCGCCCC
>site_38
GCCCCGCCGA
>site_39
GTCCCGCCCC
>site_40
GGCCCGCCGC
>site_41
AACCCGCCAA
>site_42
CGCCCGCCTT
>site_43
GACCCGCCGC
>site_44
CACCCGCCTG
>site_45
CCCCCGCCCC
>site_46
GCCCCGCCTG
a	8	8	42	0	0	0	42	0	3	9
c	13	20	0	0	0	42	0	0	19	11
g	14	7	0	0	42	0	0	42	12	10
t	7	7	0	42	0	0	0	0	8	12
//
; Sites	42
>site_0
CGATGCAGGC
>site_1
CCATGCAGCA
>site_2
TGATGCAGGT
>site_3
TAATGCAGCC
>site_4
AAATGCAGCG
>site_5
GCATGCAGTG
>site_6
ATATGCAGCT
>site_7
CCATGCAGGC
>site_8
TCATGCAGGT
>site_9
CCATGCAGGG
>site_10
GAATGCAGTG
>site_11
GAATGCAGCA
>site_12
CCATGCAGAA
>site_13
CCATGCAGGT
>site_14
AAATGCAGTC
>site_15
ATATGCAGCT
>site_16
CTATGCAGCG
>site_17
GAATGCAGCG
>site_18
GTATGCAGCA
>site_19
TGATGCAGTA
>site_20
TTATGCAGGT
>site_21
CTATGCAGAC
>site_22
ACATGCAGTC
>site_23
GAATGCAGCT
>site_24
TGATGCAGCA
>site_25
GCATGCAGGC
>site_26
GCATGCAGCG
>site_27
CGATGCAGTG
>site_28
CTATGCAGGG
>site_29
CGATGCAGTA
>site_30
CCATGCAGCC
>site_31
ACATGCAGGA
>site_32
GCATGCAGTC
>site_33
GCATGCAGCC
>site_34
GCATGCAGGG
>site_35
GCATGCAGCT
>site_36
TCATGCAGCT
>site_37
CCATGCAGAT
>site_38
GAATGCAGCC
>site_39
GCATGCAGCA
>site_40
AGATGCAGGT
>site_41
ACATGCAGCT
; Host name	rsat
; Job started	2025-06-19.093507
; Job done	2025-06-19.093507
; Seconds	0.1
;	user	0.1
;	system	0.01
;	cuser	0
;	csystem	0
